BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919125|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_E05.
         (578 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7N8U7|RPPH_PHOLL RNA pyrophosphohydrolase OS=Photorhabdus lu...    30   6.7  
sp|P48903|NU2M_CHOCR NADH-ubiquinone oxidoreductase chain 2 OS=C...    30   6.7  
sp|P09762|WIN2_SOLTU Wound-induced protein WIN2 OS=Solanum tuber...    24   9.5  

>sp|Q7N8U7|RPPH_PHOLL RNA pyrophosphohydrolase OS=Photorhabdus
           luminescens subsp. laumondii GN=rppH PE=3 SV=1
          Length = 176

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
 Frame = +3

Query: 261 PHVQYFRAFFADLVLARRVFGLYL----WTRYVLPKRLGGLNILDLRRHLLARKAMLLPI 428
           P    +R  + ++ L R+   +      W RY LPKRL      D R           P+
Sbjct: 46  PEQAMYRELYEEVGLGRKDVRILASTRNWLRYKLPKRLVR---WDTR-----------PV 91

Query: 429 LVEQQQPWALMVTHLCT-------HIITPSFGHWK-PTYW----DVVSGKLEGY 554
            + Q+Q W L+   LC        H  TP F  W+  +YW     VVS K + Y
Sbjct: 92  CIGQKQRWFLLQL-LCNEEDINVQHSNTPEFDGWRWVSYWYPVRQVVSFKRDVY 144


>sp|P48903|NU2M_CHOCR NADH-ubiquinone oxidoreductase chain 2
           OS=Chondrus crispus GN=ND2 PE=3 SV=1
          Length = 497

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 19/69 (27%), Positives = 37/69 (53%)
 Frame = +1

Query: 94  MLKLDWMLQHLHSKLNYRKLSTWPLHVHLKIAQCILVAYVQFYWPLLSWPRLRFQSLMSN 273
           ++ L W+L    S +NY +++++   + + +A   ++  +Q Y  L  +  + FQSL+  
Sbjct: 91  LMCLGWILITF-SYINYERINSFEYWILILLAIVAILFIIQSYDLLTMYLSIEFQSLIFY 149

Query: 274 TLEHFLRTS 300
            L  F RTS
Sbjct: 150 ILASFKRTS 158


>sp|P09762|WIN2_SOLTU Wound-induced protein WIN2 OS=Solanum
           tuberosum GN=WIN2 PE=2 SV=1
          Length = 211

 Score = 24.3 bits (51), Expect(2) = 9.5
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 412 LCCCQFWWSSSNP 450
           LCC QF W  S P
Sbjct: 41  LCCSQFGWCGSTP 53



 Score = 24.3 bits (51), Expect(2) = 9.5
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +2

Query: 476 YAHYHP--IFWSLETNLLGCCIWEA*RIHSWMSLY 574
           Y  Y+P  + W L      C  W+A + ++W S Y
Sbjct: 86  YHIYNPQNVGWDLNAVSAYCSTWDANKPYAWRSKY 120

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919125|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_E05.
         (578 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q0YL18|Q0YL18_9DELT Putative uncharacterized protein OS=Geoba...    35   3.0  
tr|A7S375|A7S375_NEMVE Predicted protein (Fragment) OS=Nematoste...    35   3.9  
tr|A0KXS2|A0KXS2_SHESA NnrS family protein OS=Shewanella sp. (st...    34   5.1  
tr|A6DXS2|A6DXS2_9RHOB ABC transporter, ATP-binding/permease pro...    34   5.1  
tr|Q86SX0|Q86SX0_HUMAN Full-length cDNA 5-PRIME end of clone CS0...    34   6.7  
tr|Q7N4E5|Q7N4E5_PHOLL Complete genome; segment 9/17 OS=Photorha...    33   8.7  
tr|B0TMZ5|B0TMZ5_SHEHH Catalase OS=Shewanella halifaxensis (stra...    33   8.7  
tr|A8GYR7|A8GYR7_SHEPA Catalase OS=Shewanella pealeana (strain A...    33   8.7  
tr|A4RW05|A4RW05_OSTLU Predicted protein OS=Ostreococcus lucimar...    33   8.7  

>tr|Q0YL18|Q0YL18_9DELT Putative uncharacterized protein
           OS=Geobacter sp. FRC-32 GN=GeobDRAFT_2491 PE=4 SV=1
          Length = 332

 Score = 35.0 bits (79), Expect = 3.0
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
 Frame = +1

Query: 70  PMGWNISTMLKLDWMLQHLHSKLNY-----RKLSTWPLHVHLKIAQCILVAYVQFYWPLL 234
           P+  NI     +  ML HLH   N      R+ S WP  ++ K+ +  L+A+     P+L
Sbjct: 154 PVELNIQPRHMVQMMLSHLHPTANALFYDTRQASIWPSQIYFKVPEQGLIAHCFHLHPIL 213

Query: 235 SWPRL 249
             PR+
Sbjct: 214 VRPRV 218


>tr|A7S375|A7S375_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g102865 PE=4 SV=1
          Length = 294

 Score = 34.7 bits (78), Expect = 3.9
 Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
 Frame = +3

Query: 315 VFGLYLWTRYVLPKRLGGLNILDLRRHL------LARKAM--LLPI--LVEQQQPWALMV 464
           +  + +W ++ L K+  G++ L L +         +++A   ++P   L+ Q   WA+MV
Sbjct: 63  ILWVLIWRQFFLHKKASGVDRLCLEKKFESIEKRTSKRASDTIVPWGKLIRQPGIWAIMV 122

Query: 465 THLCTHIITPSFGHWKPTYW 524
            H C + +  +   W PTY+
Sbjct: 123 VHFCHNCMYLNLSSWLPTYF 142


>tr|A0KXS2|A0KXS2_SHESA NnrS family protein OS=Shewanella sp.
           (strain ANA-3) GN=Shewana3_2362 PE=4 SV=1
          Length = 403

 Score = 34.3 bits (77), Expect = 5.1
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = +3

Query: 222 LAFVILASIALSVPHVQYFRAFFADLVLARRVFGLYLWTRYVLPKRLGG 368
           + F ++  IAL + H+ Y+  F  D +LA +++   LW   +L   +GG
Sbjct: 153 IGFPLMIFIALGINHLSYYALFKRDFILAHQIWQAMLWWLALLITIVGG 201


>tr|A6DXS2|A6DXS2_9RHOB ABC transporter, ATP-binding/permease
           protein OS=Roseovarius sp. TM1035 GN=RTM1035_04785 PE=3
           SV=1
          Length = 598

 Score = 34.3 bits (77), Expect = 5.1
 Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
 Frame = +3

Query: 207 LCAILLAFVILASIALSVPH-----VQYFRA--------FFADLVLARRVFGLYLWTRYV 347
           L A +LA VI AS+AL +P      V  F A        +FA  VL   +  +    RY+
Sbjct: 37  LTAAVLALVITASVALMLPLAVRRVVDNFSAENGAILDQYFAAAVLIAALLAVGTGLRYL 96

Query: 348 LPKRLGGLNILDLRRHLLARKAMLLPILVEQ 440
           L  RLG   + D+R+ +  R   + P   E+
Sbjct: 97  LVTRLGERVVADIRKAVFDRVIGMSPAFFER 127


>tr|Q86SX0|Q86SX0_HUMAN Full-length cDNA 5-PRIME end of clone
           CS0DK007YB08 of HeLa cells of Homo sapiens (human)
           OS=Homo sapiens PE=4 SV=1
          Length = 108

 Score = 33.9 bits (76), Expect = 6.7
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 450 WALMVTHLCTHIITPSFGHWKPTYWDVVSGKLEG 551
           W L  +HLCTH    S  HW P  W   +G  +G
Sbjct: 66  WMLTHSHLCTHTQAGSQTHWGPRSWSFPTGLNKG 99


>tr|Q7N4E5|Q7N4E5_PHOLL Complete genome; segment 9/17
           OS=Photorhabdus luminescens subsp. laumondii GN=plu2395
           PE=4 SV=1
          Length = 1350

 Score = 33.5 bits (75), Expect = 8.7
 Identities = 17/68 (25%), Positives = 33/68 (48%)
 Frame = -1

Query: 575 SKGTSRNVSFKLPRYNIPISWFPMTKRWGDNVRTQMCDHESPGLLLLHQNWQQHSFSSQK 396
           +K   +++SF LP  N PI+       W   +R ++ + +     +  Q WQ  +  +Q 
Sbjct: 437 NKPQGKSLSFPLPAMNYPIADSQSPNDWPAFIRIELAEQD----FMHSQYWQNPTDKNQP 492

Query: 395 MTPQVQNI 372
            TPQ+ ++
Sbjct: 493 YTPQISSL 500


>tr|B0TMZ5|B0TMZ5_SHEHH Catalase OS=Shewanella halifaxensis (strain
           HAW-EB4) GN=Shal_4193 PE=3 SV=1
          Length = 504

 Score = 33.5 bits (75), Expect = 8.7
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 103 LDWMLQHLHSKLNYRKLSTWPLHVHLKIAQCILVAYVQFYW 225
           L W+  +L +  +YRK+  W +H +  I     V YV+F+W
Sbjct: 194 LTWVYTNLGTPASYRKMDGWGVHAYKFINDEHQVKYVKFHW 234


>tr|A8GYR7|A8GYR7_SHEPA Catalase OS=Shewanella pealeana (strain ATCC
           700345 / ANG-SQ1) GN=Spea_0125 PE=3 SV=1
          Length = 504

 Score = 33.5 bits (75), Expect = 8.7
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 103 LDWMLQHLHSKLNYRKLSTWPLHVHLKIAQCILVAYVQFYW 225
           L W+  +L +  +YRK+  W +H +  I     V YV+F+W
Sbjct: 194 LTWVYTNLGTPASYRKMDGWGVHAYKFINDEHQVKYVKFHW 234


>tr|A4RW05|A4RW05_OSTLU Predicted protein OS=Ostreococcus
           lucimarinus (strain CCE9901) GN=OSTLU_24412 PE=4 SV=1
          Length = 563

 Score = 33.5 bits (75), Expect = 8.7
 Identities = 22/63 (34%), Positives = 30/63 (47%)
 Frame = +2

Query: 386 EASSSGSKSYAVANFGGAAATLGSHGHTFVYAHYHPIFWSLETNLLGCCIWEA*RIHSWM 565
           EA SS S+S   ++     A+   H H  +YAH+  IFW   T  L     E+    SW 
Sbjct: 450 EAQSSASRSTEESD-----ASRAHHHHDCIYAHHFDIFWRAVTTAL-----ESGDAESWG 499

Query: 566 SLY 574
           +LY
Sbjct: 500 ALY 502