BP919131 |
Clone id |
YMU001_000121_E12 |
Library |
YMU01 |
Length |
501 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000121_E12. |
Accession |
BP919131 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTTATTTGTGGTGAGTTTTTTGAGTGGATTGGGGTGCTGTGAGTGCCTTGAGCTATAGGG AGGCAACGATTTTGTTTGCTGGGTGTGTAACCATTTCCCCCTTTCCATCTTGTGGTGTCC CCATGGAGGAGCATCTGATTGTTTATCGATTGGTGAGAAGAAGCAATTTTTCCAATAGGA AGTGACGGTTGCACGAAGCTACGGGCCGATCTTCACCGGTGAGGACAATCCCGAGGAGTG GATGGCCGATTTTGAGTTGTATATGCTATCACTGCTTATGCCGAATGAAGATAGCAAGAT GCAAACAATTCTATGGCTGATGCGTGGCAAAGCAAAGGTATGGTTTAATGCATTAAGAGG TGAACCAAGGCAGGCATGGCAGGCGTTGTGGGCCCACTTCTTGCAAGACTTTTGCAAGGA TGCCTCGCTGGTCGACGTAGATGCGAAATTGATGGCTTTAAAGCAAGATGTAAGTGAAGA TATTGGTGTTTTACTTAATTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6D0C8 |
Definition |
sp|Q6D0C8|CARA_ERWCT Carbamoyl-phosphate synthase small chain OS=Erwinia carotovora subsp. atroseptica |
Align length |
85 |
Score (bit) |
37.0 |
E-value |
0.051 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6ZV49 |
Definition |
tr|Q6ZV49|Q6ZV49_HUMAN cDNA FLJ42988 fis, clone BRTHA2008955 OS=Homo sapiens |
Align length |
118 |
Score (bit) |
39.3 |
E-value |
0.1 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919131|Adiantum capillus-veneris mRNA, clone: YMU001_000121_E12. (501 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6ZV49|Q6ZV49_HUMAN cDNA FLJ42988 fis, clone BRTHA2008955 OS=... 39 0.10 tr|B6KG09|B6KG09_TOXGO Putative uncharacterized protein OS=Toxop... 37 0.40 tr|Q75H61|Q75H61_ORYSJ Putative uncharacterized protein OSJNBb00... 37 0.67 tr|Q10GV1|Q10GV1_ORYSJ Retrotransposon protein, putative, Ty3-gy... 37 0.67 tr|A5AQX1|A5AQX1_VITVI Putative uncharacterized protein OS=Vitis... 37 0.67 tr|Q8LM57|Q8LM57_ORYSJ Putative uncharacterized protein OSJNAb00... 36 0.88 tr|O48967|O48967_MAIZE Putative uncharacterized protein OS=Zea m... 36 0.88 tr|A5BAW8|A5BAW8_VITVI Putative uncharacterized protein OS=Vitis... 36 0.88 tr|A7QMH3|A7QMH3_VITVI Chromosome chr19 scaffold_126, whole geno... 36 1.1 tr|A5C8W9|A5C8W9_VITVI Putative uncharacterized protein (Fragmen... 36 1.1 tr|A5B005|A5B005_VITVI Putative uncharacterized protein OS=Vitis... 36 1.1 tr|A5B403|A5B403_VITVI Putative uncharacterized protein (Fragmen... 35 1.5 tr|A5AR75|A5AR75_VITVI Putative uncharacterized protein OS=Vitis... 35 1.5 tr|Q0GKM9|Q0GKM9_ERWCA Carbamoylphosphate synthetase small subun... 35 2.0 tr|B8C0Q6|B8C0Q6_THAPS Predicted protein OS=Thalassiosira pseudo... 35 2.0 tr|A5C960|A5C960_VITVI Putative uncharacterized protein OS=Vitis... 35 2.0 tr|A5AEN6|A5AEN6_VITVI Putative uncharacterized protein OS=Vitis... 35 2.0 tr|A6W5B2|A6W5B2_KINRD Putative uncharacterized protein OS=Kineo... 35 2.0 tr|Q0GKN1|Q0GKN1_ERWCT Carbamoylphosphate synthetase small subun... 35 2.6 tr|Q0GKM8|Q0GKM8_ERWCA Carbamoylphosphate synthetase small subun... 35 2.6 tr|Q0GKM7|Q0GKM7_9ENTR Carbamoylphosphate synthetase small subun... 35 2.6 tr|Q0GKM2|Q0GKM2_9ENTR Carbamoylphosphate synthetase small subun... 35 2.6 tr|Q7X798|Q7X798_ORYSJ OSJNBb0108J11.19 protein (OSJNBa0028I23.1... 35 2.6 tr|Q5W677|Q5W677_ORYSJ Putative polyprotein OS=Oryza sativa subs... 35 2.6 tr|Q5JQX2|Q5JQX2_ORYSA OSJNBb0015D13.7 protein OS=Oryza sativa G... 35 2.6 tr|A7QRX4|A7QRX4_VITVI Chromosome undetermined scaffold_154, who... 35 2.6 tr|A5C8W0|A5C8W0_VITVI Putative uncharacterized protein OS=Vitis... 35 2.6 tr|A5C3P3|A5C3P3_VITVI Putative uncharacterized protein OS=Vitis... 35 2.6 tr|A5BP45|A5BP45_VITVI Putative uncharacterized protein OS=Vitis... 35 2.6 tr|A5BIY7|A5BIY7_VITVI Putative uncharacterized protein OS=Vitis... 35 2.6
>tr|Q6ZV49|Q6ZV49_HUMAN cDNA FLJ42988 fis, clone BRTHA2008955 OS=Homo sapiens PE=2 SV=1 Length = 322
Score = 39.3 bits (90), Expect = 0.10 Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 8/118 (6%) Frame = -2
Query: 473 LHLALKPSISHLRRPARHP--CKSLARSGPTT------PAMPALVHLLMH*TIPLLCHAS 318 +HL++ PS+ + HP C + S P + P++PA VH +H ++PL H S Sbjct: 1 MHLSIHPSLPLCMHLSIHPRLCACICPSIPASVHASVRPSIPASVHASVHSSLPLCMHLS 60
Query: 317 AIELFASCYLHSA*AVIAYTTQNRPSTPRDCPHR*RSARSFVQPSLPIGKIASSHQSI 144 +H + + + + + CP S + V PS+P AS H S+ Sbjct: 61 ---------IHPSPPLCMHLSIHPCLCACICPFIPASVHASVHPSIPASVHASVHSSL 109
>tr|B6KG09|B6KG09_TOXGO Putative uncharacterized protein OS=Toxoplasma gondii ME49 GN=TGME49_044010 PE=4 SV=1 Length = 527
Score = 37.4 bits (85), Expect = 0.40 Identities = 24/79 (30%), Positives = 41/79 (51%) Frame = -1
Query: 468 SCFKAINFASTSTSEASLQKSCKKWAHNACHACLGSPLNALNHTFALPRISHRIVCILLS 289 S + +F+S S S +S +AC +GSP++A + T + R+ R +L+S Sbjct: 361 SWMPSFSFSSLSASSSS----------SACPGTVGSPVSAPSPTRPIDRLQERETAVLVS 410
Query: 288 SFGISSDSIYNSKSAIHSS 232 +F S DS N+ ++ SS Sbjct: 411 AFPFSFDSTENTYTSAASS 429
>tr|Q75H61|Q75H61_ORYSJ Putative uncharacterized protein OSJNBb0007E22.27 OS=Oryza sativa subsp. japonica GN=OSJNBb0007E22.27 PE=4 SV=1 Length = 575
Score = 36.6 bits (83), Expect = 0.67 Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 7/99 (7%) Frame = +2
Query: 212 FTGED--NPEEWMADFELYMLSLLMPNEDSKMQTILWLM-----RGKAKVWFNALRGEPR 370 F+G D NP M DFE L + + +T+ W + + +AK W+ + G Sbjct: 45 FSGLDLENPYHHMRDFEQVCSCLKI--RGMRQETVRWKLFPFSLQERAKQWYTSTVGYVN 102
Query: 371 QAWQALWAHFLQDFCKDASLVDVDAKLMALKQDVSEDIG 487 W+ L F DF + + ++++ KQ +E IG Sbjct: 103 GRWEKLQDRFYLDFFPVTHITALRVEILSFKQIENESIG 141
>tr|Q10GV1|Q10GV1_ORYSJ Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os03g41624 PE=4 SV=1 Length = 1300
Score = 36.6 bits (83), Expect = 0.67 Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 7/99 (7%) Frame = +2
Query: 212 FTGED--NPEEWMADFELYMLSLLMPNEDSKMQTILWLM-----RGKAKVWFNALRGEPR 370 F+G D NP M DFE L + + +T+ W + + +AK W+ + G Sbjct: 45 FSGLDLENPYHHMRDFEQVCSCLKI--RGMRQETVRWKLFPFSLQERAKQWYTSTVGYVN 102
Query: 371 QAWQALWAHFLQDFCKDASLVDVDAKLMALKQDVSEDIG 487 W+ L F DF + + ++++ KQ +E IG Sbjct: 103 GRWEKLQDRFYLDFFPVTHITALRVEILSFKQIENESIG 141
>tr|A5AQX1|A5AQX1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012466 PE=4 SV=1 Length = 444
Score = 36.6 bits (83), Expect = 0.67 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 5/74 (6%) Frame = +2
Query: 206 PIFTG--EDNPEEWMADFELYMLSLLMPN---EDSKMQTILWLMRGKAKVWFNALRGEPR 370 P F G +NP ++ DFE + N E K++ + + KAK+WFN+LR + Sbjct: 41 PQFHGMKNENPYTYIKDFEKVCHTFHEGNTSIELMKLKLFPFTLTDKAKLWFNSLRPQSI 100
Query: 371 QAWQALWAHFLQDF 412 +W L FL+ F Sbjct: 101 TSWLELQTTFLKKF 114
>tr|Q8LM57|Q8LM57_ORYSJ Putative uncharacterized protein OSJNAb0078C13.5 (Transposable element protein, putative, Retrotrans_gag) (Putative uncharacterized protein OSJNBb0078C13.2) OS=Oryza sativa subsp. japonica GN=OSJNAb0078C13.5 PE=4 SV=1 Length = 350
Score = 36.2 bits (82), Expect = 0.88 Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 3/91 (3%) Frame = +2
Query: 224 DNPEEWMADFELYMLSLL---MPNEDSKMQTILWLMRGKAKVWFNALRGEPRQAWQALWA 394 +NP ++ D EL L L M +E K + + +R KAK W+ + W+ L Sbjct: 52 ENPYLYLRDLELVCLCLSIVGMTHETLKWKLFPFSLRDKAKQWYTMSVKKFHGEWEELKC 111
Query: 395 HFLQDFCKDASLVDVDAKLMALKQDVSEDIG 487 +F F ++++ +++ +Q+ E +G Sbjct: 112 NFCLTFFPLTRVINLRLDILSFRQNEKESLG 142
>tr|O48967|O48967_MAIZE Putative uncharacterized protein OS=Zea mays PE=4 SV=1 Length = 464
Score = 36.2 bits (82), Expect = 0.88 Identities = 21/98 (21%), Positives = 47/98 (47%), Gaps = 2/98 (2%) Frame = +2
Query: 212 FTGEDNPEEWMADFELYMLSLLMPNEDSKMQTILW--LMRGKAKVWFNALRGEPRQAWQA 385 + G NP E++ ++Y+ ++ ++ M + + G A+ W L +W+ Sbjct: 216 YDGTSNPSEFL---QVYVTAITAAGGNTAMMATYFHVALSGPARTWLMNLSPGSIYSWEE 272
Query: 386 LWAHFLQDFCKDASLVDVDAKLMALKQDVSEDIGVLLN 499 L+A F+ +F V+A L A++Q+ E + + ++ Sbjct: 273 LYARFVANFASAYQQHGVEAHLHAVRQEPRETLRMFIS 310
>tr|A5BAW8|A5BAW8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042356 PE=4 SV=1 Length = 243
Score = 36.2 bits (82), Expect = 0.88 Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%) Frame = +2
Query: 287 EDSKMQTILWL-MRGKAKVWFNALRGEPRQAWQALWAHFLQDFCKDASLVDVD-AKLMAL 460 ++S+M T+ L + G A+ WF +L R+ W L FL+ F + ++VDV KL AL Sbjct: 171 DESQMITLFLLSLSGAARRWFVSLESSRRRTWDDLAREFLRQFSFN-TVVDVSRRKLEAL 229
Query: 461 KQDVSEDIGVLLN 499 +Q E I ++ Sbjct: 230 RQRSDESISSFIS 242
>tr|A7QMH3|A7QMH3_VITVI Chromosome chr19 scaffold_126, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002067001 PE=4 SV=1 Length = 1121
Score = 35.8 bits (81), Expect = 1.1 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 5/70 (7%) Frame = -2
Query: 200 SFVQPSLPIGKIASSHQSIN-----NQMLLHGDTTRWKGGNGYTPSKQNRCLPIAQGTHS 36 S +Q S PI +SS + QM+ HG+T++ GY PS Q+ C P + T+ Sbjct: 348 STIQSSQPILPNSSSAYEADPPFYHGQMIYHGETSQHMLHYGY-PSHQSNCTPYQESTNL 406
Query: 35 TPIHSKNSPQ 6 P+H + Q Sbjct: 407 MPVHGLMTQQ 416
>tr|A5C8W9|A5C8W9_VITVI Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_042378 PE=4 SV=1 Length = 688
Score = 35.8 bits (81), Expect = 1.1 Identities = 14/39 (35%), Positives = 25/39 (64%) Frame = +2
Query: 296 KMQTILWLMRGKAKVWFNALRGEPRQAWQALWAHFLQDF 412 +++ L+ ++ KAK+W N+LR ++W L A FL+ F Sbjct: 282 RLKLFLFTLKDKAKIWLNSLRPRSIRSWTDLQAEFLKKF 320
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