BP919132 |
Clone id |
YMU001_000121_F01 |
Library |
YMU01 |
Length |
560 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000121_F01. |
Accession |
BP919132 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1381Contig1 |
Sequence |
TTTTTTTTTTTTTTTTACCACCAGAAACAAGCTCATGAATACATGAAACCAGATGTGAGA AATCTCATTTAAGAATAATACATTCTTCCCACTAGCCCTCGACATATAAAAACTCTATGC CTAGAAAGTGCCGACTGCAGCAATCTATAGTATGGCCTCGCTATAGCTAATGACTTGATG CGACACACGAGGATGCACATGAGAGACTACAATCAGCATCTCACTCATGAGATTGGTCAA CTGACCACAGTAATGGCACTTGAAAACCAACATTCCAGTCTACTCGCTATTGTTGATCAT ATCAGCTGAGCTCTTTTCAGATCACCTACAACCCCTTTCTCTTGTCCTTTCTCAGAATAC AAAACCTTATCAATAAGACCATACTCCACTGCTTCAGGAGGGCTAAAATACTTTGGGCGT CTTATGTCGTCCTCAATTTTATCTTTTGAATGGCCTGTATGCCTGGCATAAAGTGAAACC AGTTCATTTTTCACATTGCGAACTTCCCTGCGAGCAATATCTATGTCAGTAGCCGAGTAC CTGCAGGTAATATCTCAAGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8LB10 |
Definition |
sp|Q8LB10|CLPR4_ARATH ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana |
Align length |
79 |
Score (bit) |
109.0 |
E-value |
1.0e-23 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LNM1 |
Definition |
tr|B8LNM1|B8LNM1_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
82 |
Score (bit) |
130.0 |
E-value |
5.0e-29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919132|Adiantum capillus-veneris mRNA, clone: YMU001_000121_F01. (544 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LNM1|B8LNM1_PICSI Putative uncharacterized protein OS=Picea... 130 5e-29 tr|A9TF07|A9TF07_PHYPA ATP-dependent Clp protease proteolytic su... 115 2e-24 tr|A9RQL9|A9RQL9_PHYPA ATP-dependent Clp protease proteolytic su... 114 3e-24 tr|A7R984|A7R984_VITVI Chromosome undetermined scaffold_3475, wh... 113 8e-24 tr|Q5NBF5|Q5NBF5_ORYSJ ATP-dependent Clp protease proteolytic su... 105 2e-21 tr|Q0JNQ7|Q0JNQ7_ORYSJ ATP-dependent Clp protease proteolytic su... 105 2e-21 tr|A2WNB9|A2WNB9_ORYSI ATP-dependent Clp protease proteolytic su... 105 2e-21 tr|A9SSY7|A9SSY7_PHYPA ATP-dependent Clp protease proteolytic su... 105 2e-21 tr|A9PAS6|A9PAS6_POPTR ATP-dependent Clp protease proteolytic su... 103 5e-21 tr|B4FNF5|B4FNF5_MAIZE Putative uncharacterized protein OS=Zea m... 103 6e-21 tr|Q01F73|Q01F73_OSTTA ATP-dependent Clp protease proteolytic su... 66 1e-09 tr|A4RST7|A4RST7_OSTLU ATP-dependent Clp protease proteolytic su... 66 1e-09 tr|B8GNT8|B8GNT8_9GAMM ATP-dependent Clp protease, proteolytic s... 65 2e-09 tr|B5R6U9|B5R6U9_SALG2 ATP-dependent clp protease proteolytic su... 64 5e-09 tr|B5QTJ6|B5QTJ6_SALEP ATP-dependent clp protease proteolytic su... 64 5e-09 tr|B5FKV3|B5FKV3_SALDC ATP-dependent Clp protease, proteolytic s... 64 5e-09 tr|B5EXI8|B5EXI8_SALA4 ATP-dependent Clp protease, proteolytic s... 64 5e-09 tr|B5BD83|B5BD83_SALPK ATP-dependent clp protease proteolytic su... 64 5e-09 tr|B4TMC6|B4TMC6_SALSV ATP-dependent Clp protease, proteolytic s... 64 5e-09 tr|B4T9E3|B4T9E3_SALHS ATP-dependent Clp protease, proteolytic s... 64 5e-09 tr|B4SWU1|B4SWU1_SALNS ATP-dependent Clp protease, proteolytic s... 64 5e-09 tr|A9MWX8|A9MWX8_SALPB ATP-dependent Clp protease proteolytic su... 64 5e-09 tr|A9MM23|A9MM23_SALAR ATP-dependent Clp protease proteolytic su... 64 5e-09 tr|B6F8V8|B6F8V8_9ENTR Putative uncharacterized protein OS=Enter... 64 5e-09 tr|B5QDJ2|B5QDJ2_SALVI ATP-dependent Clp protease, proteolytic s... 64 5e-09 tr|B5PS54|B5PS54_SALHA ATP-dependent Clp protease, proteolytic s... 64 5e-09 tr|B5PCU2|B5PCU2_SALET ATP-dependent Clp protease, proteolytic s... 64 5e-09 tr|B5NY06|B5NY06_SALET ATP-dependent Clp protease, proteolytic s... 64 5e-09 tr|B5NPW4|B5NPW4_SALET ATP-dependent Clp protease, proteolytic s... 64 5e-09 tr|B5NHP3|B5NHP3_SALET ATP-dependent Clp protease, proteolytic s... 64 5e-09
>tr|B8LNM1|B8LNM1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 158
Score = 130 bits (327), Expect = 5e-29 Identities = 62/82 (75%), Positives = 75/82 (91%), Gaps = 1/82 (1%) Frame = -1
Query: 526 RYSATDIDIARREVRNVKNELVSLYARHTGHSKDKIEDDIRRPKYFSPPEAVEYGLIDKV 347 R ATDID+AR+EVRNVKNELV+LYARHTGH K+KIE DIRRPKYFSP EA+EYG+IDKV Sbjct: 77 RGQATDIDLARKEVRNVKNELVALYARHTGHPKEKIEQDIRRPKYFSPQEAIEYGIIDKV 136
Query: 346 LYSEKG-QEKGVVGDLKRAQLI 284 +YS+KG +++GVV DLK++QLI Sbjct: 137 IYSDKGTEDRGVVADLKKSQLI 158
>tr|A9TF07|A9TF07_PHYPA ATP-dependent Clp protease proteolytic subunit OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_144625 PE=3 SV=1 Length = 237
Score = 115 bits (287), Expect = 2e-24 Identities = 55/81 (67%), Positives = 66/81 (81%) Frame = -1
Query: 526 RYSATDIDIARREVRNVKNELVSLYARHTGHSKDKIEDDIRRPKYFSPPEAVEYGLIDKV 347 R ATDIDIAR+EVRNVK ELV L +RHTG S +KI DDIRRPKYF P EAV+YG+IDKV Sbjct: 157 RGQATDIDIARKEVRNVKEELVKLLSRHTGQSPEKITDDIRRPKYFKPDEAVDYGIIDKV 216
Query: 346 LYSEKGQEKGVVGDLKRAQLI 284 LY+E +++ + DLK+AQLI Sbjct: 217 LYAEGDEKRSIASDLKKAQLI 237
>tr|A9RQL9|A9RQL9_PHYPA ATP-dependent Clp protease proteolytic subunit OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_118087 PE=3 SV=1 Length = 241
Score = 114 bits (285), Expect = 3e-24 Identities = 55/81 (67%), Positives = 66/81 (81%) Frame = -1
Query: 526 RYSATDIDIARREVRNVKNELVSLYARHTGHSKDKIEDDIRRPKYFSPPEAVEYGLIDKV 347 R ATDIDIAR+EVRNVK ELV L +RHTG + +KI DDIRRPKYF P EAV+YGLIDKV Sbjct: 161 RGQATDIDIARKEVRNVKEELVKLISRHTGQTVEKITDDIRRPKYFKPDEAVDYGLIDKV 220
Query: 346 LYSEKGQEKGVVGDLKRAQLI 284 LY+E +++ + DLK+AQLI Sbjct: 221 LYAEGDEKRSIASDLKKAQLI 241
>tr|A7R984|A7R984_VITVI Chromosome undetermined scaffold_3475, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00012767001 PE=4 SV=1 Length = 91
Score = 113 bits (282), Expect = 8e-24 Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 1/79 (1%) Frame = -1
Query: 517 ATDIDIARREVRNVKNELVSLYARHTGHSKDKIEDDIRRPKYFSPPEAVEYGLIDKVLYS 338 ATDID+AR+EV+NVK ELV LYA+H G S D+IE DIRRPKYFSP EAVEYG+IDKV Y+ Sbjct: 13 ATDIDLARKEVKNVKAELVKLYAKHIGKSPDQIEADIRRPKYFSPSEAVEYGIIDKVQYN 72
Query: 337 EKGQE-KGVVGDLKRAQLI 284 E+ E +GVV DLK AQLI Sbjct: 73 ERSSEDRGVVADLKNAQLI 91
>tr|Q5NBF5|Q5NBF5_ORYSJ ATP-dependent Clp protease proteolytic subunit OS=Oryza sativa subsp. japonica GN=P0693B08.13 PE=3 SV=1 Length = 306
Score = 105 bits (262), Expect = 2e-21 Identities = 51/79 (64%), Positives = 65/79 (82%), Gaps = 1/79 (1%) Frame = -1
Query: 517 ATDIDIARREVRNVKNELVSLYARHTGHSKDKIEDDIRRPKYFSPPEAVEYGLIDKVLYS 338 ATD+DIAR+E+RNVK E++ L +RH G S ++I DI+RPKYFSP EAV+YG+IDKVLY+ Sbjct: 228 ATDVDIARKEIRNVKIEMIKLLSRHIGKSVEEIAQDIKRPKYFSPSEAVDYGIIDKVLYN 287
Query: 337 EKGQEK-GVVGDLKRAQLI 284 EK QE GVV +LKR+ LI Sbjct: 288 EKSQEDGGVVSELKRSNLI 306
>tr|Q0JNQ7|Q0JNQ7_ORYSJ ATP-dependent Clp protease proteolytic subunit OS=Oryza sativa subsp. japonica GN=Os01g0271400 PE=3 SV=1 Length = 298
Score = 105 bits (262), Expect = 2e-21 Identities = 51/79 (64%), Positives = 65/79 (82%), Gaps = 1/79 (1%) Frame = -1
Query: 517 ATDIDIARREVRNVKNELVSLYARHTGHSKDKIEDDIRRPKYFSPPEAVEYGLIDKVLYS 338 ATD+DIAR+E+RNVK E++ L +RH G S ++I DI+RPKYFSP EAV+YG+IDKVLY+ Sbjct: 220 ATDVDIARKEIRNVKIEMIKLLSRHIGKSVEEIAQDIKRPKYFSPSEAVDYGIIDKVLYN 279
Query: 337 EKGQEK-GVVGDLKRAQLI 284 EK QE GVV +LKR+ LI Sbjct: 280 EKSQEDGGVVSELKRSNLI 298
>tr|A2WNB9|A2WNB9_ORYSI ATP-dependent Clp protease proteolytic subunit OS=Oryza sativa subsp. indica GN=OsI_01344 PE=3 SV=1 Length = 284
Score = 105 bits (262), Expect = 2e-21 Identities = 51/79 (64%), Positives = 65/79 (82%), Gaps = 1/79 (1%) Frame = -1
Query: 517 ATDIDIARREVRNVKNELVSLYARHTGHSKDKIEDDIRRPKYFSPPEAVEYGLIDKVLYS 338 ATD+DIAR+E+RNVK E++ L +RH G S ++I DI+RPKYFSP EAV+YG+IDKVLY+ Sbjct: 206 ATDVDIARKEIRNVKIEMIKLLSRHIGKSVEEIAQDIKRPKYFSPSEAVDYGIIDKVLYN 265
Query: 337 EKGQEK-GVVGDLKRAQLI 284 EK QE GVV +LKR+ LI Sbjct: 266 EKSQEDGGVVSELKRSNLI 284
>tr|A9SSY7|A9SSY7_PHYPA ATP-dependent Clp protease proteolytic subunit OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_188120 PE=3 SV=1 Length = 237
Score = 105 bits (261), Expect = 2e-21 Identities = 51/81 (62%), Positives = 61/81 (75%) Frame = -1
Query: 526 RYSATDIDIARREVRNVKNELVSLYARHTGHSKDKIEDDIRRPKYFSPPEAVEYGLIDKV 347 R ATDIDIAR+EVRNVK E V L +RHTG +KI DIRRPKYF P AV+YG+IDKV Sbjct: 157 RGQATDIDIARKEVRNVKEEFVKLLSRHTGQPPEKITGDIRRPKYFKPDGAVDYGIIDKV 216
Query: 346 LYSEKGQEKGVVGDLKRAQLI 284 LY E +++ + DLK+AQLI Sbjct: 217 LYVEGDEKRSIASDLKKAQLI 237
>tr|A9PAS6|A9PAS6_POPTR ATP-dependent Clp protease proteolytic subunit OS=Populus trichocarpa PE=2 SV=1 Length = 310
Score = 103 bits (258), Expect = 5e-21 Identities = 49/79 (62%), Positives = 67/79 (84%), Gaps = 1/79 (1%) Frame = -1
Query: 517 ATDIDIARREVRNVKNELVSLYARHTGHSKDKIEDDIRRPKYFSPPEAVEYGLIDKVLYS 338 ATD+++AR+E++NVK ELV+L A+H G ++IE DI RPKYFSP EAVEYG+IDKV+Y+ Sbjct: 232 ATDVELARKEIKNVKTELVNLLAKHIGKLPEEIEADISRPKYFSPTEAVEYGIIDKVIYN 291
Query: 337 EK-GQEKGVVGDLKRAQLI 284 E+ +++GVV DLK+AQLI Sbjct: 292 ERTTEDRGVVSDLKKAQLI 310
>tr|B4FNF5|B4FNF5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 289
Score = 103 bits (257), Expect = 6e-21 Identities = 52/79 (65%), Positives = 64/79 (81%), Gaps = 1/79 (1%) Frame = -1
Query: 517 ATDIDIARREVRNVKNELVSLYARHTGHSKDKIEDDIRRPKYFSPPEAVEYGLIDKVLYS 338 ATD+DIAR+E+RNVK E+V L ARH G ++I DIRRPKYFSP EAV+YG+IDKV+Y+ Sbjct: 211 ATDVDIARKEIRNVKIEMVKLLARHIGKPMEEIARDIRRPKYFSPSEAVDYGIIDKVIYN 270
Query: 337 EKGQEK-GVVGDLKRAQLI 284 EK QE GVV +LKR+ LI Sbjct: 271 EKIQEDGGVVSELKRSNLI 289
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