BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919146|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_G04.
         (312 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P33712|IGF1_CANFA Insulin-like growth factor I OS=Canis famil...    32   1.3  
sp|Q5HV17|SYV_CAMJR Valyl-tRNA synthetase OS=Campylobacter jejun...    31   2.2  
sp|Q9PPE4|SYV_CAMJE Valyl-tRNA synthetase OS=Campylobacter jejun...    31   2.2  
sp|Q8K7F0|CITX_STRP3 Probable apo-citrate lyase phosphoribosyl-d...    30   3.7  
sp|Q8GW20|Y5390_ARATH Uncharacterized protein At5g03900 OS=Arabi...    30   4.9  
sp|Q8WVP7|LMBR1_HUMAN Limb region 1 protein homolog OS=Homo sapi...    29   8.3  
sp|Q7ZUA6|LMBR1_CHICK Limb region 1 protein homolog OS=Gallus ga...    29   8.3  

>sp|P33712|IGF1_CANFA Insulin-like growth factor I OS=Canis
           familiaris GN=IGF1 PE=2 SV=2
          Length = 153

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +1

Query: 31  RCSGLPSNMVVCWMCHFSKVMLPT---SGIFSLIAFSLSIPTPTKSSPKYL 174
           + S LP+ +  C  C F KV + T   S +F L    L+ P+P  + P+ L
Sbjct: 3   KISSLPTQLFKCCFCDFLKVKMHTVSSSHLFYLALCLLTFPSPATAGPETL 53


>sp|Q5HV17|SYV_CAMJR Valyl-tRNA synthetase OS=Campylobacter jejuni
           (strain RM1221) GN=valS PE=3 SV=1
          Length = 870

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -2

Query: 182 SIFRYFGDDFVGVGIEREKAISENMPEVGSI 90
           +++++F DDF   GIE  KA   ++ E+GSI
Sbjct: 637 TLYKFFWDDFCDWGIELSKAEKSSVKELGSI 667


>sp|Q9PPE4|SYV_CAMJE Valyl-tRNA synthetase OS=Campylobacter jejuni
           GN=valS PE=3 SV=1
          Length = 870

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -2

Query: 182 SIFRYFGDDFVGVGIEREKAISENMPEVGSI 90
           +++++F DDF   GIE  KA   ++ E+GSI
Sbjct: 637 TLYKFFWDDFCDWGIELSKAEKSSVKELGSI 667


>sp|Q8K7F0|CITX_STRP3 Probable apo-citrate lyase
           phosphoribosyl-dephospho-CoA transferase
           OS=Streptococcus pyogenes serotype M3 GN=citX PE=3 SV=1
          Length = 192

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 14/31 (45%), Positives = 23/31 (74%)
 Frame = +1

Query: 115 SLIAFSLSIPTPTKSSPKYLKIEIIMWKYIQ 207
           SL++ +++IP P K+SPK L++  I+ K IQ
Sbjct: 39  SLLSVTMNIPGPIKTSPKLLEVFDIVIKAIQ 69


>sp|Q8GW20|Y5390_ARATH Uncharacterized protein At5g03900
           OS=Arabidopsis thaliana GN=At5g03900 PE=2 SV=2
          Length = 523

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 264 QRVLLKDDTMMHIVNEGTILYVFPHDY 184
           Q +    D  + + +EG +LYVFP DY
Sbjct: 124 QAIAADTDGFLEVSDEGDVLYVFPRDY 150


>sp|Q8WVP7|LMBR1_HUMAN Limb region 1 protein homolog OS=Homo sapiens
           GN=LMBR1 PE=2 SV=1
          Length = 490

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = +3

Query: 126 LLPFNTYTHKVITKVPEN*N----NHVEIHTRWSLHSQCASLCRPLKGPFDF 269
           LLPF+  +++++   P+N      N   IH  W+L S  ++LC  +  PF F
Sbjct: 77  LLPFSIISNEILLSFPQNYYIQWLNGSLIHGLWNLASLFSNLCLFVLMPFAF 128


>sp|Q7ZUA6|LMBR1_CHICK Limb region 1 protein homolog OS=Gallus
           gallus GN=LMBR1 PE=2 SV=1
          Length = 488

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = +3

Query: 126 LLPFNTYTHKVITKVPEN*N----NHVEIHTRWSLHSQCASLCRPLKGPFDF 269
           LLPF+  +++++   P+N      N   IH  W+L S  ++LC  +  PF F
Sbjct: 76  LLPFSIISNEILLSFPQNYYIQWLNGSLIHGLWNLASLFSNLCLFVLMPFAF 127

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919146|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_G04.
         (312 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4HI70|Q4HI70_CAMCO Valyl-tRNA synthetase OS=Campylobacter co...    33   9.3  

>tr|Q4HI70|Q4HI70_CAMCO Valyl-tRNA synthetase OS=Campylobacter coli
           RM2228 GN=valS PE=3 SV=1
          Length = 870

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 14/31 (45%), Positives = 22/31 (70%)
 Frame = -2

Query: 182 SIFRYFGDDFVGVGIEREKAISENMPEVGSI 90
           +++++F DDF   GIE  KA  E++ E+GSI
Sbjct: 637 TLYKFFWDDFCDWGIELSKAQKESVKELGSI 667