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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919148
Clone id YMU001_000121_G06
Library
Length 472
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000121_G06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TCCAATCCTTCATGAAAGTCTGTTTATCCCATATGTACATTTTCTCCTATACCCTAGTAG
TTCTAAAACACAACGAAGGACATCCAACAGCAATGTGGACTTTTCAACCCCAGAAGCACA
GTGTGCAGTCTAATACTGTGTTGAACAAAGCACTCCACTCTGCAGCGAAGGTCTCACGTG
CCTTGATCGCTAACTAATCCAGAACCCAATTATCTTCTCCACCCCGAACGAGAACCAAAC
TGGCTTTGCAGTTGCCGCTCTTCTCTAAGACTGGCAAAGCGAGAATCCAAAGTTTGAGGC
CTTCGAACAGATGCGTTGGCCACTGCCTTGTTAGGACGCCAATTCTGTCTTTGAGCTGGC
ATTCCTCCTCTCGCCAAGGAAACTACATGTGGAGCTGCAGGCCTTCTCGTCGCTCCAGCC
ATGCTCAACTGATTCACAATCACTGTCTTCGTGTTCCTGGCTGCAGACATAA
■■Homology search results ■■ -
sp_hit_id Q6DI48
Definition sp|Q6DI48|DLLA_DANRE Delta-like protein A OS=Danio rerio
Align length 55
Score (bit) 32.3
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919148|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_G06.
         (472 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6DI48|DLLA_DANRE Delta-like protein A OS=Danio rerio GN=dla ...    32   1.1  
sp|Q6H3X3|RET1G_HUMAN Retinoic acid early transcript 1G protein ...    32   1.4  
sp|P97677|DLL1_RAT Delta-like protein 1 OS=Rattus norvegicus GN=...    29   9.1  

>sp|Q6DI48|DLLA_DANRE Delta-like protein A OS=Danio rerio GN=dla
           PE=1 SV=1
          Length = 772

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = +3

Query: 306 NRCVGHCLVRTPILSLSWHSSSRQGNYMWSCRPSRRSSHAQLIHNHCLRVPGCRH 470
           N+ + +C    P L+ +  S++ QG+Y  SCRP    +  ++  N C   P CR+
Sbjct: 288 NQDLNYCTHHKPCLNGATCSNTGQGSYTCSCRPGFSGASCEIEVNECTGNP-CRN 341


>sp|Q6H3X3|RET1G_HUMAN Retinoic acid early transcript 1G protein
           OS=Homo sapiens GN=RAET1G PE=1 SV=1
          Length = 334

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 12/74 (16%)
 Frame = +1

Query: 97  GLFNPRSTVCSLILC*---------TKHSTLQRRSHVP*SLTNPEPNYLLHPEREPNWLC 249
           G   PR+T  +LILC          ++HS  Q   H P SL  P    LLH    P WL 
Sbjct: 218 GTAQPRATATTLILCCLLIMCLLICSRHSLTQSHGHHPQSLQPPPHPPLLH----PTWLL 273

Query: 250 S---CRSSLRLAKR 282
                  S ++AKR
Sbjct: 274 RRVLWSDSYQIAKR 287


>sp|P97677|DLL1_RAT Delta-like protein 1 OS=Rattus norvegicus
           GN=Dll1 PE=2 SV=1
          Length = 714

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = +3

Query: 306 NRCVGHCLVRTPILSLSWHSSSRQGNYMWSCRPSRRSSHAQLIHNHCLRVPGCRH 470
           N+ + +C    P  + +  +++ QG+Y  SCRP    ++ +L  + C   P CR+
Sbjct: 285 NQDLNYCTHHKPCRNGATCTNTGQGSYTCSCRPGYTGANCELEVDECAPSP-CRN 338
tr_hit_id A3D8F2
Definition tr|A3D8F2|A3D8F2_SHEB5 Molybdenum ABC transporter, periplasmic molybdate-binding protein OS=Shewanella baltica (strain OS155 / ATCC BAA-1091)
Align length 37
Score (bit) 35.0
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919148|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_G06.
         (472 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A3D8F2|A3D8F2_SHEB5 Molybdenum ABC transporter, periplasmic m...    35   1.9  
tr|B8ED57|B8ED57_9GAMM Molybdenum ABC transporter, periplasmic m...    35   1.9  
tr|B4V1E9|B4V1E9_9ACTO Putative uncharacterized protein OS=Strep...    35   1.9  
tr|A9L1U2|A9L1U2_SHEB9 Molybdenum ABC transporter, periplasmic m...    34   3.2  
tr|A6WJG6|A6WJG6_SHEB8 Molybdenum ABC transporter, periplasmic m...    34   3.2  
tr|A3HWJ7|A3HWJ7_9SPHI Putative uncharacterized protein OS=Algor...    34   4.2  
tr|Q46UE3|Q46UE3_RALEJ Uncharacterized protein UPF0065 OS=Ralsto...    33   5.5  
tr|Q9VN58|Q9VN58_DROME CG17735 OS=Drosophila melanogaster GN=CG1...    33   5.5  
tr|B4I3T0|B4I3T0_DROSE GM10679 OS=Drosophila sechellia GN=GM1067...    33   5.5  
tr|A9S1F3|A9S1F3_PHYPA Predicted protein OS=Physcomitrella paten...    33   7.1  
tr|Q6FIT2|Q6FIT2_CANGA Strain CBS138 chromosome M complete seque...    33   7.1  
tr|A5BE29|A5BE29_VITVI Putative uncharacterized protein (Fragmen...    33   9.3  

>tr|A3D8F2|A3D8F2_SHEB5 Molybdenum ABC transporter, periplasmic
           molybdate-binding protein OS=Shewanella baltica (strain
           OS155 / ATCC BAA-1091) GN=Sbal_3538 PE=3 SV=1
          Length = 263

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = -1

Query: 325 QWPTHLFEGLKLWILALPVLEKSGNCKASLVLVRGGE 215
           Q+     E LKLW +A P+L ++ N +A+L LV  GE
Sbjct: 157 QYAKQALENLKLWQVAEPLLARANNVRAALALVEQGE 193


>tr|B8ED57|B8ED57_9GAMM Molybdenum ABC transporter, periplasmic
           molybdate-binding protein OS=Shewanella baltica OS223
           GN=Sbal223_0823 PE=3 SV=1
          Length = 263

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = -1

Query: 325 QWPTHLFEGLKLWILALPVLEKSGNCKASLVLVRGGE 215
           Q+     E LKLW +A P+L ++ N +A+L LV  GE
Sbjct: 157 QYAKQALENLKLWQVAEPLLARANNVRAALALVEQGE 193


>tr|B4V1E9|B4V1E9_9ACTO Putative uncharacterized protein
           OS=Streptomyces sp. Mg1 GN=SSAG_01577 PE=4 SV=1
          Length = 432

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 8/63 (12%)
 Frame = +3

Query: 306 NRCVGHCLVR--------TPILSLSWHSSSRQGNYMWSCRPSRRSSHAQLIHNHCLRVPG 461
           N   G+CL          T ++    H+   QG   W   P+ +S H +L H+ CL VPG
Sbjct: 314 NEATGNCLDSFGGASANGTKVVGWDCHAGRNQG---WWYDPATKSVHVELTHDRCLDVPG 370

Query: 462 CRH 470
             +
Sbjct: 371 ANY 373


>tr|A9L1U2|A9L1U2_SHEB9 Molybdenum ABC transporter, periplasmic
           molybdate-binding protein OS=Shewanella baltica (strain
           OS195) GN=Sbal195_0830 PE=3 SV=1
          Length = 263

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -1

Query: 325 QWPTHLFEGLKLWILALPVLEKSGNCKASLVLVRGGE 215
           Q+     E LKLW  A P+L ++ N +A+L LV  GE
Sbjct: 157 QYAKQALENLKLWQAAEPLLARANNVRAALALVEQGE 193


>tr|A6WJG6|A6WJG6_SHEB8 Molybdenum ABC transporter, periplasmic
           molybdate-binding protein OS=Shewanella baltica (strain
           OS185) GN=Shew185_0798 PE=3 SV=1
          Length = 263

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -1

Query: 325 QWPTHLFEGLKLWILALPVLEKSGNCKASLVLVRGGE 215
           Q+     E LKLW  A P+L ++ N +A+L LV  GE
Sbjct: 157 QYAKQALENLKLWQAAEPLLARANNVRAALALVEQGE 193


>tr|A3HWJ7|A3HWJ7_9SPHI Putative uncharacterized protein
           OS=Algoriphagus sp. PR1 GN=ALPR1_18078 PE=4 SV=1
          Length = 461

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 28/93 (30%), Positives = 44/93 (47%)
 Frame = +3

Query: 105 QPQKHSVQSNTVLNKALHSAAKVSRALIAN*SRTQLSSPPRTRTKLALQLPLFSKTGKAR 284
           QPQ+   Q+ T   +   ++   SR+     SR+++SSP ++RTK + Q+   S++   R
Sbjct: 374 QPQQRKQQTRTQPTQRTKASTPTSRS-----SRSKVSSPSQSRTKSSPQV-RSSRSSNVR 427

Query: 285 IQSLRPSNRCVGHCLVRTPILSLSWHSSSRQGN 383
               R S          T   S S  SSS +GN
Sbjct: 428 TAPKRTSKSSTSSARKSTSRSSSSRSSSSSRGN 460


>tr|Q46UE3|Q46UE3_RALEJ Uncharacterized protein UPF0065 OS=Ralstonia
           eutropha (strain JMP134) GN=Reut_B3884 PE=4 SV=1
          Length = 328

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = -3

Query: 428 LSMAGATRRPAAPHVVSLARGGMPA-QRQNWRPNKAVANASVRRPQTLDSRFASLREERQ 252
           L++ GATR PAAP   ++A+ G+P  +   W    A A        TL+    ++ ++  
Sbjct: 226 LAITGATRSPAAPDTPTIAQAGLPGYEASAWNALLAPAGTPPAILNTLNGALKAVLQDPD 285

Query: 251 LQSQF 237
           ++++F
Sbjct: 286 VRARF 290


>tr|Q9VN58|Q9VN58_DROME CG17735 OS=Drosophila melanogaster
           GN=CG17735 PE=1 SV=3
          Length = 2228

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 24/78 (30%), Positives = 35/78 (44%)
 Frame = -3

Query: 470 MSAARNTKTVIVNQLSMAGATRRPAAPHVVSLARGGMPAQRQNWRPNKAVANASVRRPQT 291
           MSA ++  T      +  GA+   AA    + A         N  P  +V    V+R  +
Sbjct: 571 MSAGQDLTTTSAGSAAAGGASTSAAA----AAASSNNNNNNNNNPPGNSVNLNQVKRRPS 626

Query: 290 LDSRFASLREERQLQSQF 237
           LD+R A L+EER L + F
Sbjct: 627 LDARIACLKEERGLAADF 644


>tr|B4I3T0|B4I3T0_DROSE GM10679 OS=Drosophila sechellia GN=GM10679
           PE=4 SV=1
          Length = 2226

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 24/78 (30%), Positives = 35/78 (44%)
 Frame = -3

Query: 470 MSAARNTKTVIVNQLSMAGATRRPAAPHVVSLARGGMPAQRQNWRPNKAVANASVRRPQT 291
           MSA ++  T      +  GA+   AA    + A         N  P  +V    V+R  +
Sbjct: 572 MSAGQDLTTTSAGSAASGGASTSAAA----AAASSNNNNNNNNNPPGNSVNLNQVKRRPS 627

Query: 290 LDSRFASLREERQLQSQF 237
           LD+R A L+EER L + F
Sbjct: 628 LDARIACLKEERGLAADF 645


>tr|A9S1F3|A9S1F3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_162318 PE=4 SV=1
          Length = 345

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 24/71 (33%), Positives = 31/71 (43%)
 Frame = -3

Query: 464 AARNTKTVIVNQLSMAGATRRPAAPHVVSLARGGMPAQRQNWRPNKAVANASVRRPQTLD 285
           AA N    +VN  S  G  R  A     ++      + RQ    N     A  +RP+TLD
Sbjct: 239 AAPNMTVSVVNNASNVGTGRGAAHSRRRTVGAAPSVSFRQVSTDNANHFQAQPQRPKTLD 298

Query: 284 SRFASLREERQ 252
           S FAS+R   Q
Sbjct: 299 SLFASIRNTSQ 309