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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919149
Clone id YMU001_000121_G07
Library
Length 497
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000121_G07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTCAATAGAAAGAAATGGCCAACTTGATTTCAAGATTCAACAGCACCATACTCACTCCAG
GCCGCTCTGTGCCTCAAGTTCGTCTATCGTAAGCCAAGGATATGGGATATCTCCTTCACT
GAGTGATTCAAGAAACTCAATTTCCCTCGGTGTCTTGAAATACTTCAGCAAATCCGCATC
TGACATGATCTCCCTATCTGGCTGGACAGGTGGAGTCGATAGTGCAAGCCTGTAGTAAAC
AGCTTTAAGTATGTCTTCATGTGCTCCCCTAATAAGACAATACTGAATTAGAAAGTCTTC
ATCATCTAGAGCTCTATCGTGTGCCTTTGCATCATCATTCACATGCATTGAAGCAGAGAA
TTGTGAGTCTTTCAGTTGCAAAGCCTTTCTAACAATAAACTCTTCATTTCCTTCACTTGC
AAGCTGGCTCGCCATCTCTAGCTTGACAGTCACAATGCGTCTCTTTGCAGTCTCAATTTT
CGCAGAACGTTTGGCAG
■■Homology search results ■■ -
sp_hit_id Q8VIG2
Definition sp|Q8VIG2|LKAP_RAT Limkain-b1 OS=Rattus norvegicus
Align length 132
Score (bit) 33.1
E-value 0.73
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919149|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_G07.
         (497 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8VIG2|LKAP_RAT Limkain-b1 OS=Rattus norvegicus GN=Lkap PE=1 ...    33   0.73 
sp|A8G742|KAD_PROM2 Adenylate kinase OS=Prochlorococcus marinus ...    32   1.2  
sp|Q9Y4F3|LKAP_HUMAN Limkain-b1 OS=Homo sapiens GN=LKAP PE=1 SV=4      32   2.1  
sp|A2BTB8|KAD_PROMS Adenylate kinase OS=Prochlorococcus marinus ...    32   2.1  
sp|P59532|T2R41_MOUSE Taste receptor type 2 member 41 OS=Mus mus...    31   2.8  
sp|Q9JKS6|PCLO_RAT Protein piccolo OS=Rattus norvegicus GN=Pclo ...    31   3.6  
sp|Q2IBB4|ASZ1_RHIFE Ankyrin repeat, SAM and basic leucine zippe...    31   3.6  
sp|Q9Y6V0|PCLO_HUMAN Protein piccolo OS=Homo sapiens GN=PCLO PE=...    30   4.7  
sp|Q09343|YR27_CAEEL Uncharacterized protein W02B3.7 OS=Caenorha...    30   6.1  
sp|O84307|VATI_CHLTR V-type ATP synthase subunit I OS=Chlamydia ...    30   8.0  
sp|P09085|CAD_DROME Homeotic protein caudal OS=Drosophila melano...    30   8.0  

>sp|Q8VIG2|LKAP_RAT Limkain-b1 OS=Rattus norvegicus GN=Lkap PE=1 SV=1
          Length = 1735

 Score = 33.1 bits (74), Expect = 0.73
 Identities = 29/132 (21%), Positives = 62/132 (46%), Gaps = 10/132 (7%)
 Frame = -3

Query: 462  RRIVTVKLEMASQLAS-------EGNEEFIVRKALQLKDSQFSASMHVNDDAKAHDRALD 304
            +RIV +K +M ++L+S         ++  + R+ L++ +   ++ +H+       ++ L 
Sbjct: 1549 KRIVVLKNDMKNRLSSFDLSPVNHEDQPAVSRQILEVPEPHLASELHLRTGPSQMEQELL 1608

Query: 303  DEDFLIQYCLIRGAHEDILKAVYYRLALSTPPVQPDREIMSDADLLKYFKTPRE---IEF 133
                     L   +  D+L A      L +P ++PD  I+   DL+++ + P+E   + F
Sbjct: 1609 Q--------LANSSPVDLLCAPVPS-CLPSPQLRPDPVILQPTDLIQFEEHPQEPLGVLF 1659

Query: 132  LESLSEGDIPYP 97
            L    + +IP P
Sbjct: 1660 LNQEEKTEIPIP 1671


>sp|A8G742|KAD_PROM2 Adenylate kinase OS=Prochlorococcus marinus
           (strain MIT 9215) GN=adk PE=3 SV=1
          Length = 182

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = -3

Query: 300 EDFLIQYCLIRGAHEDILKAVYYRLALSTPPVQPDREIMSDADLLKYFKTPREIEFLES 124
           E+ LI+  L+RG  +D  K +  R+ +     +P  +   D  LL+Y    R+++ + S
Sbjct: 117 EEVLIKRLLLRGRKDDTEKTIRTRVDIYKKTTEPLIQYFKDLSLLEYIDADRDLKTISS 175


>sp|Q9Y4F3|LKAP_HUMAN Limkain-b1 OS=Homo sapiens GN=LKAP PE=1 SV=4
          Length = 1741

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 10/132 (7%)
 Frame = -3

Query: 462  RRIVTVKLEMASQLAS-------EGNEEFIVRKALQLKDSQFSASMHVNDDAKAHDRALD 304
            +RIV +K +M S+L+S         N+     + L++ +S  ++ + +  D         
Sbjct: 1551 KRIVVLKNDMKSRLSSLSLSPANHENQPSEGERILEVPESHTASELKLGADGSGPSHT-- 1608

Query: 303  DEDFLIQYCLIRGAHEDILKAVYYRLALSTPPVQPDREIMSDADLLKYFKTPR---EIEF 133
             E  L++  L   +  D+L A      L +P ++PD  I+  ADL+++ + P+   EI  
Sbjct: 1609 -EQELLR--LTDDSPVDLLCAPVPS-CLPSPQLRPDPVILQSADLIQFEERPQEPSEIMI 1664

Query: 132  LESLSEGDIPYP 97
            L    + +IP P
Sbjct: 1665 LNQEEKMEIPIP 1676


>sp|A2BTB8|KAD_PROMS Adenylate kinase OS=Prochlorococcus marinus
           (strain AS9601) GN=adk PE=3 SV=1
          Length = 182

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 15/59 (25%), Positives = 30/59 (50%)
 Frame = -3

Query: 300 EDFLIQYCLIRGAHEDILKAVYYRLALSTPPVQPDREIMSDADLLKYFKTPREIEFLES 124
           E+ LI+  L+RG  +D  + +  R+ +     +P  +   D  LL+Y    R+++ + S
Sbjct: 117 EEVLIERLLLRGRKDDTEETIRTRVDIYKKTTEPLIQYFKDLSLLEYINADRDLKTISS 175


>sp|P59532|T2R41_MOUSE Taste receptor type 2 member 41 OS=Mus
           musculus GN=Tas2r41 PE=2 SV=1
          Length = 308

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +2

Query: 320 CAFASSFTCIEAENCESFSCKAFLTINSSFPSLASWLAISSLTVTM 457
           C + S   CI+  N   FS  AFL +   FP+L  W  + S+ V++
Sbjct: 100 CTWLSVLFCIKIAN---FSHPAFLWLKWRFPALVPWFLLGSILVSV 142


>sp|Q9JKS6|PCLO_RAT Protein piccolo OS=Rattus norvegicus GN=Pclo PE=1
            SV=1
          Length = 5085

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +2

Query: 47   HTHSRPLCASSSSIVSQGYGISPSLSDSRNS 139
            H HS P  A SSS+ S G   SPS+S  ++S
Sbjct: 4594 HAHSGPTSAGSSSVPSPGQPGSPSVSKKKHS 4624


>sp|Q2IBB4|ASZ1_RHIFE Ankyrin repeat, SAM and basic leucine zipper
           domain-containing protein 1 OS=Rhinolophus ferrumequinum
           GN=ASZ1 PE=3 SV=1
          Length = 479

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -3

Query: 306 DDEDFLIQYCLIRGAHEDILKAVYYRLALSTPPVQPDREIMS 181
           D +  LI  C  RG+ E ILK V   L+ +  P  P R +M+
Sbjct: 114 DKQTILITACSARGSEEQILKCVELLLSRNADPNVPCRRLMT 155


>sp|Q9Y6V0|PCLO_HUMAN Protein piccolo OS=Homo sapiens GN=PCLO PE=1
            SV=3
          Length = 5183

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +2

Query: 47   HTHSRPLCASSSSIVSQGYGISPSLSDSRNSISLGVLKY 163
            H HS P  A SSS+ S G   SPS+S  ++  S   + Y
Sbjct: 4537 HVHSGPTSAGSSSVPSPGQPGSPSVSKKKHGSSKLQINY 4575


>sp|Q09343|YR27_CAEEL Uncharacterized protein W02B3.7
           OS=Caenorhabditis elegans GN=W02B3.7 PE=2 SV=1
          Length = 162

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -3

Query: 279 CLIRGAHEDILKAVYYRLALSTPPVQPDREIMSDADLLKYFKTP 148
           CL+       +  VYY   L+TP ++P  E +  + LL Y K P
Sbjct: 6   CLLYWFLSIFIVVVYYNEILTTPIIEPSVEYVLCSTLLDYLKAP 49


>sp|O84307|VATI_CHLTR V-type ATP synthase subunit I OS=Chlamydia
           trachomatis GN=atpI PE=3 SV=1
          Length = 649

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -3

Query: 195 REIMSDADLLKYFKTPREIEFLESLSEGDIPYPWLTIDE 79
           +E++ D  +LK  KTP+E    +S S GD  Y  +  D+
Sbjct: 414 KELVHDYPILKEKKTPKEFLLAQSTSSGDSVYKAVVYDK 452
tr_hit_id B3JV02
Definition tr|B3JV02|B3JV02_9DELT Putative uncharacterized protein OS=Geobacter sp. M21
Align length 71
Score (bit) 38.1
E-value 0.23
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919149|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_G07.
         (497 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3JV02|B3JV02_9DELT Putative uncharacterized protein OS=Geoba...    38   0.23 
tr|B5EDM7|B5EDM7_GEOBB Putative uncharacterized protein OS=Geoba...    35   2.6  
tr|B8A1P5|B8A1P5_MAIZE Putative uncharacterized protein OS=Zea m...    33   7.5  
tr|B6TGH1|B6TGH1_MAIZE Putative uncharacterized protein OS=Zea m...    33   7.5  
tr|B4FA36|B4FA36_MAIZE Putative uncharacterized protein OS=Zea m...    33   7.5  
tr|Q4DIV2|Q4DIV2_TRYCR Putative uncharacterized protein OS=Trypa...    33   7.5  
tr|B0N4Z3|B0N4Z3_9FIRM Putative uncharacterized protein OS=Clost...    33   9.8  

>tr|B3JV02|B3JV02_9DELT Putative uncharacterized protein
           OS=Geobacter sp. M21 GN=GM21DRAFT_1397 PE=4 SV=1
          Length = 149

 Score = 38.1 bits (87), Expect = 0.23
 Identities = 27/71 (38%), Positives = 33/71 (46%)
 Frame = -3

Query: 417 SEGNEEFIVRKALQLKDSQFSASMHVNDDAKAHDRALDDEDFLIQYCLIRGAHEDILKAV 238
           S GNEE      L L+   F  S  V + A A  R   DE    + C+I G H  + KAV
Sbjct: 3   SVGNEEL-----LMLQKVAFLCSRQVPEGAAAKARRWADEQREQRRCVISGYHSPLEKAV 57

Query: 237 YYRLALSTPPV 205
             RL L T P+
Sbjct: 58  LCRLLLGTQPI 68


>tr|B5EDM7|B5EDM7_GEOBB Putative uncharacterized protein
           OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 /
           DSM 16622) GN=Gbem_3663 PE=4 SV=1
          Length = 169

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 24/80 (30%), Positives = 36/80 (45%)
 Frame = -3

Query: 444 KLEMASQLASEGNEEFIVRKALQLKDSQFSASMHVNDDAKAHDRALDDEDFLIQYCLIRG 265
           K+   + + S GNEE ++++ +      F  S  V        R   DE   +  C+I G
Sbjct: 14  KVIKGAAMYSIGNEEILMQQKVA-----FLCSRKVPQGVAVKARRWADEQRELGRCVISG 68

Query: 264 AHEDILKAVYYRLALSTPPV 205
            H  + KAV  RL L T P+
Sbjct: 69  YHSPLEKAVLCRLLLGTQPI 88


>tr|B8A1P5|B8A1P5_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 426

 Score = 33.1 bits (74), Expect = 7.5
 Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = +2

Query: 62  PLCASSSSIVSQGYGISPSLSDSRNSISLGVLKYFSKSASD----MISLSGW 205
           P  ASS+S+V  G   +PS S    + S GV +  SKS SD     +SLS W
Sbjct: 272 PTQASSTSVVKSGLSETPSYSAPDPNASYGVEESLSKSNSDEKNAALSLSRW 323


>tr|B6TGH1|B6TGH1_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 246

 Score = 33.1 bits (74), Expect = 7.5
 Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = +2

Query: 62  PLCASSSSIVSQGYGISPSLSDSRNSISLGVLKYFSKSASD----MISLSGW 205
           P  ASS+S+V  G   +PS S    + S GV +  SKS SD     +SLS W
Sbjct: 92  PTQASSTSVVKSGLSETPSYSAPDPNASYGVEESLSKSNSDEKNAALSLSRW 143


>tr|B4FA36|B4FA36_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 453

 Score = 33.1 bits (74), Expect = 7.5
 Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = +2

Query: 62  PLCASSSSIVSQGYGISPSLSDSRNSISLGVLKYFSKSASD----MISLSGW 205
           P  ASS+S+V  G   +PS S    + S GV +  SKS SD     +SLS W
Sbjct: 299 PTQASSTSVVKSGLSETPSYSAPDPNASYGVEESLSKSNSDEKNAALSLSRW 350


>tr|Q4DIV2|Q4DIV2_TRYCR Putative uncharacterized protein
           OS=Trypanosoma cruzi GN=Tc00.1047053507709.120 PE=4 SV=1
          Length = 1354

 Score = 33.1 bits (74), Expect = 7.5
 Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 9/71 (12%)
 Frame = -3

Query: 258 EDILKAVYYRLALSTPPVQP-------DREIMSDADLLKYFKTPRE-IEFLE-SLSEGDI 106
           ED L+  Y  + LS  PV+        ++E+M+D D L YF   RE IE  E  LS GD 
Sbjct: 347 EDFLRRRYESIHLSWEPVKIVMMRFGWNQELMTDRDCLLYFSKFREHIELAELELSAGDD 406

Query: 105 PYPWLTIDELE 73
               L ID+ E
Sbjct: 407 KPKALPIDDAE 417


>tr|B0N4Z3|B0N4Z3_9FIRM Putative uncharacterized protein
            OS=Clostridium ramosum DSM 1402 GN=CLORAM_01704 PE=4 SV=1
          Length = 1591

 Score = 32.7 bits (73), Expect = 9.8
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
 Frame = -3

Query: 414  EGNEEFIVRKALQLKDSQFSASMHVNDDAKAHDRALDDEDFLIQ---YCLIRGAHEDILK 244
            E +EE+ V+   + K++   A + + DD +A  + +DD    +Q     L++   E + K
Sbjct: 1356 ETSEEYTVQSYQEFKEAYDQAIVILKDD-QATQKQVDDSYEKLQTMYQALVKKTEEKVDK 1414

Query: 243  AVYYRLALSTPPVQPDREIMSDADLLKYFKT 151
            +    L   T  +  D     DADL+K FKT
Sbjct: 1415 SQLEALLAITDKITEDILSNLDADLVKEFKT 1445