BP919156 |
Clone id |
YMU001_000121_H04 |
Library |
YMU01 |
Length |
416 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000121_H04. |
Accession |
BP919156 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTCTTTCCACCATCTCTGAGCTGAGGTCCTGCTCAAAGCTCTCATTTTCCTAGCTACAGA AGATCAATTACACGCACCCACAGCCATACACACGGACACACTCATCCAGAAAATTGCTTA ACGACTAGTTGCGCAGAAACGAACTGCTGTAGCTCGCTCTCCAAACGCCAATTGCAGCTT TGAAAGCATTTGCAGAGTGAGAAGGGCGAACCACTTTCACACAGAGAATTCCTCATATAC ACAGGTAATTTCCCGACGAGCACCCATACACACGCATGCATGGAAGGCAGAGATTCCGCT AGTCCTAAAGCCCCACATACCCATCCTCAACATGGGCACGACAGCCATGGGCCTTTCTCA GCTTATTTTCGAGATCCCGGTTACCCACTTATGGGTAGTTCACCTTCAATCATCCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q174I2 |
Definition |
sp|Q174I2|PRIC1_AEDAE Protein prickle OS=Aedes aegypti |
Align length |
37 |
Score (bit) |
34.3 |
E-value |
0.2 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919156|Adiantum capillus-veneris mRNA, clone: YMU001_000121_H04. (416 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q174I2|PRIC1_AEDAE Protein prickle OS=Aedes aegypti GN=pk PE=... 34 0.20 sp|P37836|PFL_CHLRE Formate acetyltransferase (Fragment) OS=Chla... 33 0.45 sp|Q8WTV1|THAP3_HUMAN THAP domain-containing protein 3 OS=Homo s... 32 1.3 sp|Q5R6R3|CCPG1_PONAB Cell cycle progression protein 1 OS=Pongo ... 31 2.2 sp|P0C6B8|SVEP1_RAT Sushi, von Willebrand factor type A, EGF and... 30 2.9 sp|Q8CTX6|PFLB_STAES Formate acetyltransferase OS=Staphylococcus... 30 2.9 sp|Q5HKH9|PFLB_STAEQ Formate acetyltransferase OS=Staphylococcus... 30 2.9 sp|Q7A1W9|PFLB_STAAW Formate acetyltransferase OS=Staphylococcus... 30 2.9 sp|Q6GCQ0|PFLB_STAAS Formate acetyltransferase OS=Staphylococcus... 30 2.9 sp|Q6GK90|PFLB_STAAR Formate acetyltransferase OS=Staphylococcus... 30 2.9 sp|Q7A7X6|PFLB_STAAN Formate acetyltransferase OS=Staphylococcus... 30 2.9 sp|Q99WZ7|PFLB_STAAM Formate acetyltransferase OS=Staphylococcus... 30 2.9 sp|Q5HJF4|PFLB_STAAC Formate acetyltransferase OS=Staphylococcus... 30 2.9 sp|Q2YV53|PFLB_STAAB Formate acetyltransferase OS=Staphylococcus... 30 2.9 sp|Q2G1D8|PFLB_STAA8 Formate acetyltransferase OS=Staphylococcus... 30 2.9 sp|Q2FK44|PFLB_STAA3 Formate acetyltransferase OS=Staphylococcus... 30 2.9 sp|Q9ULG6|CCPG1_HUMAN Cell cycle progression protein 1 OS=Homo s... 30 2.9 sp|O70306|TBX15_MOUSE T-box transcription factor TBX15 OS=Mus mu... 30 3.8 sp|Q96SF7|TBX15_HUMAN T-box transcription factor TBX15 OS=Homo s... 30 3.8 sp|A2AVA0|SVEP1_MOUSE Sushi, von Willebrand factor type A, EGF a... 30 3.8 sp|Q0P5B4|THAP3_BOVIN THAP domain-containing protein 3 OS=Bos ta... 30 4.9 sp|Q3UG20|MLL5_MOUSE Histone-lysine N-methyltransferase MLL5 OS=... 30 4.9 sp|O54743|FOXF2_MOUSE Forkhead box protein F2 OS=Mus musculus GN... 30 4.9 sp|Q46266|PFL_CLOPA Formate acetyltransferase OS=Clostridium pas... 29 6.4 sp|Q54QR1|LIMA_DICDI LIM domain-containing protein A OS=Dictyost... 29 6.4 sp|P04196|HRG_HUMAN Histidine-rich glycoprotein OS=Homo sapiens ... 29 6.4 sp|Q5ZKH6|HDAC9_CHICK Histone deacetylase 9 OS=Gallus gallus GN=... 29 6.4 sp|A7GIK1|GATB_CLOBL Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransf... 29 6.4 sp|A5I6Z2|GATB_CLOBH Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransf... 29 6.4 sp|A7FYL2|GATB_CLOB1 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransf... 29 6.4
>sp|Q174I2|PRIC1_AEDAE Protein prickle OS=Aedes aegypti GN=pk PE=3 SV=1 Length = 916
Score = 34.3 bits (77), Expect = 0.20 Identities = 20/37 (54%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Frame = +1
Query: 301 SPKAPHTHPQH-GHDSHGPFSAYFRDPGYPLMGSSPS 408 S A + HPQH H HGPFS + P P MGSSPS Sbjct: 115 SQAATNLHPQHLQHLQHGPFS---QQPPPPPMGSSPS 148
>sp|P37836|PFL_CHLRE Formate acetyltransferase (Fragment) OS=Chlamydomonas reinhardtii GN=PFL PE=2 SV=1 Length = 195
Score = 33.1 bits (74), Expect = 0.45 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = +1
Query: 232 LIYTGNFPTSTHTHACMEGRDSASPKAPHTHPQHGHDSHGPFSA 363 L T N T + +GR P AP +P HG D+HG ++ Sbjct: 44 LTITSNVVYGKKTGSTPDGRKKGEPFAPGANPLHGRDAHGALAS 87
>sp|Q8WTV1|THAP3_HUMAN THAP domain-containing protein 3 OS=Homo sapiens GN=THAP3 PE=2 SV=1 Length = 239
Score = 31.6 bits (70), Expect = 1.3 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Frame = +1
Query: 127 SCAETNCCSSLSKRQLQL*KH-LQSEKGEPLSHREFLIYTGNFPTSTHTHACME 285 SCA CC+ S R+ QL H + E L I GNF HT C E Sbjct: 4 SCAARQCCNRYSSRRKQLTFHRFPFSRPELLKEWVLNIGRGNFKPKQHTVICSE 57
>sp|Q5R6R3|CCPG1_PONAB Cell cycle progression protein 1 OS=Pongo abelii GN=CCPG1 PE=2 SV=1 Length = 806
Score = 30.8 bits (68), Expect = 2.2 Identities = 19/63 (30%), Positives = 29/63 (46%) Frame = +1
Query: 121 TTSCAETNCCSSLSKRQLQL*KHLQSEKGEPLSHREFLIYTGNFPTSTHTHACMEGRDSA 300 T SC CSSL + +LQ LQ E+GE + L+ +P T + +E + Sbjct: 33 TNSCEPAPECSSLEQEELQA---LQLEQGESSQNGTVLMEETAYPALEETSSTIEAEEEK 89
Query: 301 SPK 309 P+ Sbjct: 90 IPE 92
>sp|P0C6B8|SVEP1_RAT Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Rattus norvegicus GN=Svep1 PE=1 SV=1 Length = 3564
Score = 30.4 bits (67), Expect = 2.9 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = +1
Query: 199 EKGEPLSHREFLIYTGNFPTSTHTHACMEGRDSASPKAPHTHPQHGHDSHGPFSAYFRDP 378 ++G L+ + +I N ++ H C+ P H P+ H G + Y+ Sbjct: 1985 KEGYTLAGPDTIICQANGKWNSSNHQCLAVSCDEPPNVDHASPETAHRLFGDTAFYYCAD 2044
Query: 379 GYPLMGSSPSI 411 GY L +S I Sbjct: 2045 GYSLADNSQLI 2055
>sp|Q8CTX6|PFLB_STAES Formate acetyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pflB PE=3 SV=1 Length = 748
Score = 30.4 bits (67), Expect = 2.9 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = +1
Query: 232 LIYTGNFPTSTHTHACMEGRDSASPKAPHTHPQHGHDSHGPFSA 363 L T N T +GR + P AP +P HG D G S+ Sbjct: 598 LTITSNVVYGKKTGNTPDGRKAGEPFAPGANPMHGRDQKGALSS 641
>sp|Q5HKH9|PFLB_STAEQ Formate acetyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pflB PE=3 SV=1 Length = 748
Score = 30.4 bits (67), Expect = 2.9 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = +1
Query: 232 LIYTGNFPTSTHTHACMEGRDSASPKAPHTHPQHGHDSHGPFSA 363 L T N T +GR + P AP +P HG D G S+ Sbjct: 598 LTITSNVVYGKKTGNTPDGRKAGEPFAPGANPMHGRDQKGALSS 641
>sp|Q7A1W9|PFLB_STAAW Formate acetyltransferase OS=Staphylococcus aureus (strain MW2) GN=pflB PE=3 SV=1 Length = 749
Score = 30.4 bits (67), Expect = 2.9 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = +1
Query: 232 LIYTGNFPTSTHTHACMEGRDSASPKAPHTHPQHGHDSHGPFSA 363 L T N T +GR + P AP +P HG D G S+ Sbjct: 599 LTITSNVVYGKKTGNTPDGRKAGEPFAPGANPMHGRDQKGALSS 642
>sp|Q6GCQ0|PFLB_STAAS Formate acetyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=pflB PE=3 SV=1 Length = 749
Score = 30.4 bits (67), Expect = 2.9 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = +1
Query: 232 LIYTGNFPTSTHTHACMEGRDSASPKAPHTHPQHGHDSHGPFSA 363 L T N T +GR + P AP +P HG D G S+ Sbjct: 599 LTITSNVVYGKKTGNTPDGRKAGEPFAPGANPMHGRDQKGALSS 642
>sp|Q6GK90|PFLB_STAAR Formate acetyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=pflB PE=3 SV=1 Length = 749
Score = 30.4 bits (67), Expect = 2.9 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = +1
Query: 232 LIYTGNFPTSTHTHACMEGRDSASPKAPHTHPQHGHDSHGPFSA 363 L T N T +GR + P AP +P HG D G S+ Sbjct: 599 LTITSNVVYGKKTGNTPDGRKAGEPFAPGANPMHGRDQKGALSS 642
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A6E8I5 |
Definition |
tr|A6E8I5|A6E8I5_9SPHI Formate acetyltransferase OS=Pedobacter sp. BAL39 |
Align length |
63 |
Score (bit) |
35.8 |
E-value |
1.1 |
Report |
|