BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919157|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_H05.
         (491 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9J513|V222_FOWPV Putative ankyrin repeat protein FPV222 OS=F...    32   1.6  
sp|Q8FFE0|YPDB_ECOL6 Uncharacterized response regulatory protein...    30   5.9  
sp|P21642|PPCKM_CHICK Phosphoenolpyruvate carboxykinase [GTP], m...    30   5.9  
sp|P0AE41|YPDB_SHIFL Uncharacterized response regulatory protein...    30   7.8  
sp|P0AE39|YPDB_ECOLI Uncharacterized response regulatory protein...    30   7.8  
sp|P0AE40|YPDB_ECO57 Uncharacterized response regulatory protein...    30   7.8  

>sp|Q9J513|V222_FOWPV Putative ankyrin repeat protein FPV222
           OS=Fowlpox virus GN=FPV222 PE=4 SV=1
          Length = 747

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = -1

Query: 404 NHMWALHVSKVTINKAYVIS*EENTYKWIICTMARREGGGVQSVYVPQKLYV 249
           N  + LH+     NK        +  KW++CT++  E  GV   YVP   YV
Sbjct: 495 NECYGLHMLAALHNK--------DLLKWLLCTISELEVNGVDDHYVPLASYV 538


>sp|Q8FFE0|YPDB_ECOL6 Uncharacterized response regulatory protein
           ypdB OS=Escherichia coli O6 GN=ypdB PE=3 SV=2
          Length = 245

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
 Frame = +3

Query: 177 N*AYHIN*VHRKAILYTQRKSYSLYIQLLGYIHTLHPSPLSSCH---CANYPLISVLFLA 347
           N  Y+     +   +YT+R+SY + + +  +   L PS    CH   C N   I  +   
Sbjct: 154 NDIYYAEAHEKMTFVYTRRESYVMPMNITEFFSKLPPSHFFRCHRSFCVNLNKIREIEPW 213

Query: 348 YN----IRLIDCDF 377
           +N    +RL D DF
Sbjct: 214 FNNTYILRLKDLDF 227


>sp|P21642|PPCKM_CHICK Phosphoenolpyruvate carboxykinase [GTP],
           mitochondrial OS=Gallus gallus GN=PCK2 PE=1 SV=1
          Length = 640

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 163 PLYIESVGWHHGVFKEESKARQSTA 89
           PL +E+ GW HGVF   +   ++TA
Sbjct: 460 PLVVEAFGWRHGVFMGSAMRSEATA 484


>sp|P0AE41|YPDB_SHIFL Uncharacterized response regulatory protein
           ypdB OS=Shigella flexneri GN=ypdB PE=3 SV=1
          Length = 244

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
 Frame = +3

Query: 177 N*AYHIN*VHRKAILYTQRKSYSLYIQLLGYIHTLHPSPLSSCH---CANYPLISVLFLA 347
           N  Y+     +   +YT+R+SY + + +  +   L PS    CH   C N   I  +   
Sbjct: 153 NDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPW 212

Query: 348 YN----IRLIDCDF 377
           +N    +RL D DF
Sbjct: 213 FNNTYILRLKDLDF 226


>sp|P0AE39|YPDB_ECOLI Uncharacterized response regulatory protein
           ypdB OS=Escherichia coli (strain K12) GN=ypdB PE=1 SV=1
          Length = 244

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
 Frame = +3

Query: 177 N*AYHIN*VHRKAILYTQRKSYSLYIQLLGYIHTLHPSPLSSCH---CANYPLISVLFLA 347
           N  Y+     +   +YT+R+SY + + +  +   L PS    CH   C N   I  +   
Sbjct: 153 NDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPW 212

Query: 348 YN----IRLIDCDF 377
           +N    +RL D DF
Sbjct: 213 FNNTYILRLKDLDF 226


>sp|P0AE40|YPDB_ECO57 Uncharacterized response regulatory protein
           ypdB OS=Escherichia coli O157:H7 GN=ypdB PE=3 SV=1
          Length = 244

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
 Frame = +3

Query: 177 N*AYHIN*VHRKAILYTQRKSYSLYIQLLGYIHTLHPSPLSSCH---CANYPLISVLFLA 347
           N  Y+     +   +YT+R+SY + + +  +   L PS    CH   C N   I  +   
Sbjct: 153 NDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPW 212

Query: 348 YN----IRLIDCDF 377
           +N    +RL D DF
Sbjct: 213 FNNTYILRLKDLDF 226

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919157|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_H05.
         (491 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A3GHC8|A3GHC8_PICST Allantoate permease OS=Pichia stipitis GN...    33   9.3  

>tr|A3GHC8|A3GHC8_PICST Allantoate permease OS=Pichia stipitis
           GN=DAL6 PE=4 SV=1
          Length = 508

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
 Frame = -2

Query: 409 CRIICGLFMSPKSQSIR-RML*AKKRTLISG*FAQWQEERGEGCKVCMYPKSCM*SEYDF 233
           C ++CG F + K  + R   + A   ++I+G F  W         V  +       +Y +
Sbjct: 166 CTLVCGRFYTKKEIATRLAFVFAFASSVING-FLSWLVGNFNDSHVAAW-------KYLY 217

Query: 232 LCV*SMAFLWTQLMWYAQLLIESPLYIESVGWHHGVFKEESKARQS 95
           + V S++FLW  LMW+   L +SPL  + +     V+  +   R S
Sbjct: 218 ILVGSVSFLWGCLMWF--FLPDSPLNAKFLSTQQKVYVVKRVIRDS 261