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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919160
Clone id YMU001_000121_H08
Library
Length 438
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000121_H08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GTGAAGCACCACCACAAGTGTGCTCATCATGAAATGCCTTGACCATACACCTATGGTCCA
CCAGAGACCAAAGACGCATGCAAGCGCCACATGCATCCCTCTGCCTATGCATACAACGGT
ATATCTGGATTGATCACGCTTAGCATGCCTAAGCTTCACATGAGAGTTGATTGCTTGTTC
TTGAACCTTTGAACAAAGCACATCGAAGAGATTCAAATTGAGCACCAAGGAGAAAGAGTT
GCAAACATGGTAGCATTATTCTCCGATGTATTTGCATGACTCTCAGCCATGGTTGCCCTC
TTGTGTGTACCCGCAATACCACACTTCTTTACATACAAACAATAACGAGCTCTTGCATCA
ATCTGTATCTTGCATTATGCGGATGGACATATGCCTTGCACATAGCCATTCGCATACATC
GCACAAAAGGCTCCCAAC
■■Homology search results ■■ -
sp_hit_id Q92614
Definition sp|Q92614|MY18A_HUMAN Myosin-XVIIIa OS=Homo sapiens
Align length 84
Score (bit) 30.0
E-value 4.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919160|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_H08.
         (438 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q92614|MY18A_HUMAN Myosin-XVIIIa OS=Homo sapiens GN=MYO18A PE...    30   4.4  
sp|Q9P0V8|SLAF8_HUMAN SLAM family member 8 OS=Homo sapiens GN=SL...    30   5.7  
sp|Q99PD2|RN138_RAT E3 ubiquitin-protein ligase RNF138 OS=Rattus...    30   5.7  
sp|Q1AU71|Y2113_RUBXD UPF0078 membrane protein Rxyl_2113 OS=Rubr...    29   7.5  
sp|P06242|KIN28_YEAST Serine/threonine-protein kinase KIN28 OS=S...    29   7.5  
sp|Q9JMH9|MY18A_MOUSE Myosin-XVIIIa OS=Mus musculus GN=Myo18a PE...    29   7.5  
sp|Q5R5M5|ENPP3_PONAB Ectonucleotide pyrophosphatase/phosphodies...    29   9.8  
sp|O14638|ENPP3_HUMAN Ectonucleotide pyrophosphatase/phosphodies...    29   9.8  

>sp|Q92614|MY18A_HUMAN Myosin-XVIIIa OS=Homo sapiens GN=MYO18A PE=1
            SV=3
          Length = 2054

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
 Frame = -3

Query: 406  AMCKAYVHPHNARYRLMQELVIVCM*RSVVLRVHTRGQPWLRVMQIHR---RIMLPCLQL 236
            A C+ Y+   + + R +Q+L I C+ +++      +  PW ++    R    + L   Q+
Sbjct: 1197 AACRGYLARQHFKKRKIQDLAIRCVQKNIKKNKGVKDWPWWKLFTTVRPLIEVQLSEEQI 1256

Query: 235  FLLGAQFESLRCALFKGSRTSNQL 164
                 + + LR  L K  +  N+L
Sbjct: 1257 RNKDEEIQQLRSKLEKAEKERNEL 1280


>sp|Q9P0V8|SLAF8_HUMAN SLAM family member 8 OS=Homo sapiens
           GN=SLAMF8 PE=1 SV=1
          Length = 285

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
 Frame = -3

Query: 319 VLRVHTRGQPWLRVMQ--IHRRIMLPCLQLFL 230
           VL V TRGQPW + +Q  ++  +  P +Q+F+
Sbjct: 103 VLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFI 134


>sp|Q99PD2|RN138_RAT E3 ubiquitin-protein ligase RNF138 OS=Rattus
           norvegicus GN=Rnf138 PE=2 SV=1
          Length = 209

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
 Frame = -3

Query: 247 CLQLFLLGAQFESLRCALFKGSRTSNQLSCEA*AC*A*SIQIYRCMHRQRDACGAC---M 77
           C + FL   +   + C L +GS T  + +C   A     I +   M R   +C  C   +
Sbjct: 39  CRKCFLTAMRESGIHCPLCRGSVTRRERACPERA-----IDLENIMRRVSGSCRCCSKKI 93

Query: 76  RLWSLVDHRCMVKAFHDEH 20
           + + +  H    K + DE+
Sbjct: 94  KFYRMRHHYKSCKKYQDEY 112


>sp|Q1AU71|Y2113_RUBXD UPF0078 membrane protein Rxyl_2113
           OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC
           16129) GN=Rxyl_2113 PE=3 SV=1
          Length = 199

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
 Frame = -1

Query: 114 VCIGRGMHVALAC-----VFGLWWTIGVWSRHFMMSTLVVVL 4
           V  G G  +ALA      +F LWW + + SR+  ++ +VV +
Sbjct: 105 VATGAGTSIALAPPVGLGMFALWWVVALASRYTSLAAMVVTV 146


>sp|P06242|KIN28_YEAST Serine/threonine-protein kinase KIN28
           OS=Saccharomyces cerevisiae GN=KIN28 PE=1 SV=1
          Length = 306

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 52  YGPPETKDACKRHMHPSAYAYNGISGLITLSMPKLHMRVDCL 177
           Y PP   +  KR +  S YA + + G++T++  K    V CL
Sbjct: 244 YPPPSRDELRKRFIAASEYALDFMCGMLTMNPQKRWTAVQCL 285


>sp|Q9JMH9|MY18A_MOUSE Myosin-XVIIIa OS=Mus musculus GN=Myo18a PE=1
            SV=2
          Length = 2050

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
 Frame = -3

Query: 406  AMCKAYVHPHNARYRLMQELVIVCM*RSVVLRVHTRGQPWLRVMQIHR---RIMLPCLQL 236
            A C+ Y+   + + R +Q+L I C+ +++      +  PW ++    R   ++ L   Q+
Sbjct: 1193 AACRGYLARQHFKKRKIQDLAIRCVQKNIKKNKGVKDWPWWKLFTTVRPLIQVQLSEEQI 1252

Query: 235  FLLGAQFESLRCALFKGSRTSNQL 164
                 + + LR  L K  +  N+L
Sbjct: 1253 RNKDEEIQQLRSKLEKVEKERNEL 1276


>sp|Q5R5M5|ENPP3_PONAB Ectonucleotide
           pyrophosphatase/phosphodiesterase family member 3
           OS=Pongo abelii GN=ENPP3 PE=2 SV=1
          Length = 873

 Score = 28.9 bits (63), Expect = 9.8
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +2

Query: 188 FEQSTSKRFKLSTKEKELQTW*HYSPMYLHDSQPWLPSCVY 310
           ++ + +K F LS+KE+    W H  PM+L      L +  Y
Sbjct: 229 YDVNLNKNFSLSSKEQNNPAWWHGQPMWLTAMYQGLKAATY 269


>sp|O14638|ENPP3_HUMAN Ectonucleotide
           pyrophosphatase/phosphodiesterase family member 3
           OS=Homo sapiens GN=ENPP3 PE=1 SV=2
          Length = 875

 Score = 28.9 bits (63), Expect = 9.8
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +2

Query: 188 FEQSTSKRFKLSTKEKELQTW*HYSPMYLHDSQPWLPSCVY 310
           ++ + +K F LS+KE+    W H  PM+L      L +  Y
Sbjct: 229 YDVNLNKNFSLSSKEQNNPAWWHGQPMWLTAMYQGLKAATY 269
tr_hit_id Q9VEZ0
Definition tr|Q9VEZ0|Q9VEZ0_DROME Myosin heavy chain-like, isoform A OS=Drosophila melanogaster
Align length 79
Score (bit) 34.3
E-value 3.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919160|Adiantum capillus-veneris mRNA, clone:
YMU001_000121_H08.
         (438 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9VEZ0|Q9VEZ0_DROME Myosin heavy chain-like, isoform A OS=Dro...    34   3.2  
tr|Q8INC3|Q8INC3_DROME Myosin heavy chain-like, isoform B OS=Dro...    34   3.2  
tr|Q8IH49|Q8IH49_DROME Myosin heavy chain-like, isoform C OS=Dro...    34   3.2  
tr|Q7K523|Q7K523_DROME GH15471p OS=Drosophila melanogaster GN=Mh...    34   3.2  
tr|Q294V0|Q294V0_DROPS GA15963 OS=Drosophila pseudoobscura pseud...    34   3.2  
tr|Q0KI67|Q0KI67_DROME Myosin heavy chain-like, isoform G OS=Dro...    34   3.2  
tr|Q0KI66|Q0KI66_DROME Myosin heavy chain-like, isoform F OS=Dro...    34   3.2  
tr|B4QXQ6|B4QXQ6_DROSI GD20308 OS=Drosophila simulans GN=GD20308...    34   3.2  
tr|B4PR41|B4PR41_DROYA GE26337 OS=Drosophila yakuba GN=GE26337 P...    34   3.2  
tr|B4NL14|B4NL14_DROWI GK14016 (Fragment) OS=Drosophila willisto...    34   3.2  
tr|B4HLE1|B4HLE1_DROSE GM25734 OS=Drosophila sechellia GN=GM2573...    34   3.2  
tr|B4GMK8|B4GMK8_DROPE GL12404 OS=Drosophila persimilis GN=GL124...    34   3.2  
tr|B3P0Y0|B3P0Y0_DROER GG20180 OS=Drosophila erecta GN=GG20180 P...    34   3.2  
tr|B3LZY8|B3LZY8_DROAN GF18854 OS=Drosophila ananassae GN=GF1885...    34   3.2  
tr|B6NKX2|B6NKX2_BRAFL Putative uncharacterized protein OS=Branc...    34   4.1  
tr|B6M5L0|B6M5L0_BRAFL Putative uncharacterized protein OS=Branc...    34   4.1  
tr|B7PCI6|B7PCI6_IXOSC Centromere protein B, putative (Fragment)...    33   5.4  
tr|Q9AYI6|Q9AYI6_ORYSJ Putative maize transposon MuDR mudrA-like...    26   8.6  
tr|Q0IZD0|Q0IZD0_ORYSJ Os10g0104700 protein (Fragment) OS=Oryza ...    26   8.7  
tr|Q33BI5|Q33BI5_ORYSJ Transposon protein, putative, Mutator sub...    26   8.7  
tr|A2Z4D0|A2Z4D0_ORYSI Putative uncharacterized protein OS=Oryza...    26   8.7  
tr|A9TK68|A9TK68_PHYPA Predicted protein OS=Physcomitrella paten...    33   9.2  
tr|A2ZT54|A2ZT54_ORYSJ Putative uncharacterized protein OS=Oryza...    33   9.2  
tr|B4KAF3|B4KAF3_DROMO GI10100 (Fragment) OS=Drosophila mojavens...    33   9.2  
tr|A8P057|A8P057_BRUMA Protein kinase domain containing protein ...    33   9.2  
tr|A8NED2|A8NED2_BRUMA Protein kinase domain containing protein ...    33   9.2  

>tr|Q9VEZ0|Q9VEZ0_DROME Myosin heavy chain-like, isoform A
            OS=Drosophila melanogaster GN=Mhcl PE=2 SV=3
          Length = 2148

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
 Frame = -3

Query: 406  AMCKAYVHPHNARYRLMQELVIVCM*RSVVLRVHTRGQPWLR-------VMQIHR---RI 257
            A C+ Y+       R +QEL + C+ R+V   +  R  PW R       ++ +HR   ++
Sbjct: 1329 AFCRGYLARKKMSQRRVQELAVRCIQRNVKAFLAVRDWPWWRLLVRVTPLLNVHRTEEQL 1388

Query: 256  MLPCLQLFLLGAQFESLRC 200
                 +L +L A+ E + C
Sbjct: 1389 KTANEELLMLRAKLEKIEC 1407


>tr|Q8INC3|Q8INC3_DROME Myosin heavy chain-like, isoform B
            OS=Drosophila melanogaster GN=Mhcl PE=2 SV=2
          Length = 2194

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
 Frame = -3

Query: 406  AMCKAYVHPHNARYRLMQELVIVCM*RSVVLRVHTRGQPWLR-------VMQIHR---RI 257
            A C+ Y+       R +QEL + C+ R+V   +  R  PW R       ++ +HR   ++
Sbjct: 1329 AFCRGYLARKKMSQRRVQELAVRCIQRNVKAFLAVRDWPWWRLLVRVTPLLNVHRTEEQL 1388

Query: 256  MLPCLQLFLLGAQFESLRC 200
                 +L +L A+ E + C
Sbjct: 1389 KTANEELLMLRAKLEKIEC 1407


>tr|Q8IH49|Q8IH49_DROME Myosin heavy chain-like, isoform C
           OS=Drosophila melanogaster GN=Mhcl PE=2 SV=1
          Length = 920

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
 Frame = -3

Query: 406 AMCKAYVHPHNARYRLMQELVIVCM*RSVVLRVHTRGQPWLR-------VMQIHR---RI 257
           A C+ Y+       R +QEL + C+ R+V   +  R  PW R       ++ +HR   ++
Sbjct: 89  AFCRGYLARKKMSQRRVQELAVRCIQRNVKAFLAVRDWPWWRLLVRVTPLLNVHRTEEQL 148

Query: 256 MLPCLQLFLLGAQFESLRC 200
                +L +L A+ E + C
Sbjct: 149 KTANEELLMLRAKLEKIEC 167


>tr|Q7K523|Q7K523_DROME GH15471p OS=Drosophila melanogaster GN=Mhcl
            PE=2 SV=1
          Length = 2028

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
 Frame = -3

Query: 406  AMCKAYVHPHNARYRLMQELVIVCM*RSVVLRVHTRGQPWLR-------VMQIHR---RI 257
            A C+ Y+       R +QEL + C+ R+V   +  R  PW R       ++ +HR   ++
Sbjct: 1209 AFCRGYLARKKMSQRRVQELAVRCIQRNVKAFLAVRDWPWWRLLVRVTPLLNVHRTEEQL 1268

Query: 256  MLPCLQLFLLGAQFESLRC 200
                 +L +L A+ E + C
Sbjct: 1269 KTANEELLMLRAKLEKIEC 1287


>tr|Q294V0|Q294V0_DROPS GA15963 OS=Drosophila pseudoobscura
            pseudoobscura GN=GA15963 PE=4 SV=2
          Length = 2657

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
 Frame = -3

Query: 406  AMCKAYVHPHNARYRLMQELVIVCM*RSVVLRVHTRGQPWLR-------VMQIHR---RI 257
            A C+ Y+       R +QEL + C+ R+V   +  R  PW R       ++ +HR   ++
Sbjct: 1415 AFCRGYLARKKMSQRRVQELAVRCIQRNVKAFLAVRDWPWWRLLVRVTPLLNVHRTEEQL 1474

Query: 256  MLPCLQLFLLGAQFESLRC 200
                 +L +L A+ E + C
Sbjct: 1475 KTANEELLMLRAKLEKIEC 1493


>tr|Q0KI67|Q0KI67_DROME Myosin heavy chain-like, isoform G
            OS=Drosophila melanogaster GN=Mhcl PE=4 SV=1
          Length = 2160

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
 Frame = -3

Query: 406  AMCKAYVHPHNARYRLMQELVIVCM*RSVVLRVHTRGQPWLR-------VMQIHR---RI 257
            A C+ Y+       R +QEL + C+ R+V   +  R  PW R       ++ +HR   ++
Sbjct: 1329 AFCRGYLARKKMSQRRVQELAVRCIQRNVKAFLAVRDWPWWRLLVRVTPLLNVHRTEEQL 1388

Query: 256  MLPCLQLFLLGAQFESLRC 200
                 +L +L A+ E + C
Sbjct: 1389 KTANEELLMLRAKLEKIEC 1407


>tr|Q0KI66|Q0KI66_DROME Myosin heavy chain-like, isoform F
            OS=Drosophila melanogaster GN=Mhcl PE=4 SV=1
          Length = 1923

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
 Frame = -3

Query: 406  AMCKAYVHPHNARYRLMQELVIVCM*RSVVLRVHTRGQPWLR-------VMQIHR---RI 257
            A C+ Y+       R +QEL + C+ R+V   +  R  PW R       ++ +HR   ++
Sbjct: 1092 AFCRGYLARKKMSQRRVQELAVRCIQRNVKAFLAVRDWPWWRLLVRVTPLLNVHRTEEQL 1151

Query: 256  MLPCLQLFLLGAQFESLRC 200
                 +L +L A+ E + C
Sbjct: 1152 KTANEELLMLRAKLEKIEC 1170


>tr|B4QXQ6|B4QXQ6_DROSI GD20308 OS=Drosophila simulans GN=GD20308 PE=4
            SV=1
          Length = 2203

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
 Frame = -3

Query: 406  AMCKAYVHPHNARYRLMQELVIVCM*RSVVLRVHTRGQPWLR-------VMQIHR---RI 257
            A C+ Y+       R +QEL + C+ R+V   +  R  PW R       ++ +HR   ++
Sbjct: 1384 AFCRGYLARKKMSQRRVQELAVRCIQRNVKAFLAVRDWPWWRLLVRVTPLLNVHRTEEQL 1443

Query: 256  MLPCLQLFLLGAQFESLRC 200
                 +L +L A+ E + C
Sbjct: 1444 KTANEELLMLRAKLEKIEC 1462


>tr|B4PR41|B4PR41_DROYA GE26337 OS=Drosophila yakuba GN=GE26337 PE=4
            SV=1
          Length = 2101

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
 Frame = -3

Query: 406  AMCKAYVHPHNARYRLMQELVIVCM*RSVVLRVHTRGQPWLR-------VMQIHR---RI 257
            A C+ Y+       R +QEL + C+ R+V   +  R  PW R       ++ +HR   ++
Sbjct: 1270 AFCRGYLARKKMSQRRVQELAVRCIQRNVKAFLAVRDWPWWRLLVRVTPLLNVHRTEEQL 1329

Query: 256  MLPCLQLFLLGAQFESLRC 200
                 +L +L A+ E + C
Sbjct: 1330 KTANEELLMLRAKLEKIEC 1348


>tr|B4NL14|B4NL14_DROWI GK14016 (Fragment) OS=Drosophila willistoni
           GN=GK14016 PE=4 SV=1
          Length = 1112

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
 Frame = -3

Query: 406 AMCKAYVHPHNARYRLMQELVIVCM*RSVVLRVHTRGQPWLR-------VMQIHR---RI 257
           A C+ Y+       R +QEL + C+ R+V   +  R  PW R       ++ +HR   ++
Sbjct: 28  AFCRGYLARKKMSQRRVQELAVRCIQRNVKAFLAVRDWPWWRLLVRVTPLLNVHRTEEQL 87

Query: 256 MLPCLQLFLLGAQFESLRC 200
                +L +L A+ E + C
Sbjct: 88  KTANEELLMLRAKLEKIEC 106