BP919164 |
Clone id |
YMU001_000122_A01 |
Library |
YMU01 |
Length |
550 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000122_A01. |
Accession |
BP919164 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2451Contig1 |
Sequence |
TGGTCACCAAACCCTGTTGACTGAAACGAAACAAACGCCTTCTGCATGTCTATTGAAAGT CCATCAACTTGTCGAGAGCTTTTCCTCAATCGAATCCCAGCTGACTTGTTTCCAGTGTAC GTCTCTGCAGCGTCCACTTCACACTCATTCACCGTTCTGCAAATCTCATTGTAAATCCGA GCAACCTCTAATCTTCTTGGTTCATTATCATAAGCATATGCTGAAATTTCTTCTGGAGCT AATAGTGTGAGAAAAGGGTGAGAGTCCTCAGCATCATTTCCTGTAGCCTGCGGGGCAGTC TGACCTGCATCTTCCATGGCTTCTCCTTCCACTTTTGATTCTTCCAAAGACTCCTGGTGA TACTCTGCATTCAAGGCCCTTTCAAGTAGCACTACTCGTTTCTTCAAAAACTCAACCATT CTCTTGTGTATGCGGTGTTCGTCTGGCCTTTCAGTTGCTGAAAACCCTATTCCTCCATCT TCCTGCCCCCCTGCATGGTTAGAATTAATGCCCACGGCTTGTCCCGCAACTTCTTCTTTC GGGAAGCTAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9S775 |
Definition |
sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana |
Align length |
136 |
Score (bit) |
67.8 |
E-value |
3.0e-11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7P5Y1 |
Definition |
tr|A7P5Y1|A7P5Y1_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
164 |
Score (bit) |
90.9 |
E-value |
4.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919164|Adiantum capillus-veneris mRNA, clone: YMU001_000122_A01. (550 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7P5Y1|A7P5Y1_VITVI Chromosome chr4 scaffold_6, whole genome ... 91 4e-17 tr|A5BRA6|A5BRA6_VITVI Putative uncharacterized protein OS=Vitis... 91 4e-17 tr|Q6YNJ6|Q6YNJ6_ORYSA Chromatin-remodeling factor CHD3 OS=Oryza... 44 0.006 tr|Q5SML0|Q5SML0_ORYSJ Chromatin-remodeling factor CHD3 OS=Oryza... 44 0.006 tr|Q0DE21|Q0DE21_ORYSJ Os06g0183800 protein (Fragment) OS=Oryza ... 44 0.006 tr|B8B3I5|B8B3I5_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.006 tr|A3B915|A3B915_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.006 tr|A9RX41|A9RX41_PHYPA SNF2 family DNA-dependent ATPase (Fragmen... 44 0.007 tr|A9TI22|A9TI22_PHYPA SNF2 family DNA-dependent ATPase (Fragmen... 43 0.009 tr|Q9SZ57|Q9SZ57_ARATH Putative uncharacterized protein AT4g3190... 42 0.028 tr|Q16L63|Q16L63_AEDAE Putative uncharacterized protein OS=Aedes... 40 0.10 tr|B6LBM0|B6LBM0_BRAFL Putative uncharacterized protein OS=Branc... 39 0.14 tr|Q012R8|Q012R8_OSTTA Chromosome 08 contig 1, DNA sequence. (Fr... 38 0.31 tr|Q8L3W0|Q8L3W0_ORYSJ Putative uncharacterized protein P0455H11... 38 0.31 tr|A0ZIW4|A0ZIW4_NODSP Cobaltochelatase OS=Nodularia spumigena C... 38 0.41 tr|Q4P1I6|Q4P1I6_USTMA Putative uncharacterized protein OS=Ustil... 36 1.2 tr|Q0YIP1|Q0YIP1_9DELT Glycosyl transferase, family 51 OS=Geobac... 36 1.5 tr|A6RUT1|A6RUT1_BOTFB Putative uncharacterized protein OS=Botry... 36 1.5 tr|B2DBG2|B2DBG2_9NEOP Sarcalumenin OS=Papilio xuthus PE=2 SV=1 35 2.0 tr|B2WA12|B2WA12_PYRTR Carbon catabolite repression protein CreD... 35 2.6 tr|A2FDR0|A2FDR0_TRIVA Putative uncharacterized protein OS=Trich... 35 3.4 tr|B2WN62|B2WN62_PYRTR 5-oxoprolinase OS=Pyrenophora tritici-rep... 35 3.4 tr|Q6TAF9|Q6TAF9_SOLTU Blight resistance protein SH10 (Fragment)... 34 4.4 tr|B4R3D5|B4R3D5_DROSI GD15508 OS=Drosophila simulans GN=GD15508... 34 4.4 tr|B4KCY2|B4KCY2_DROMO GI10857 OS=Drosophila mojavensis GN=GI108... 34 4.4 tr|A7SIN2|A7SIN2_NEMVE Predicted protein (Fragment) OS=Nematoste... 34 4.4 tr|B4LQ32|B4LQ32_DROVI GJ21428 OS=Drosophila virilis GN=GJ21428 ... 34 4.5 tr|Q120U5|Q120U5_POLSJ Putative uncharacterized protein OS=Polar... 34 5.8 tr|A9TTN6|A9TTN6_PHYPA Predicted protein (Fragment) OS=Physcomit... 34 5.8 tr|Q16XZ7|Q16XZ7_AEDAE Smooth muscle caldesmon, putative OS=Aede... 34 5.8
>tr|A7P5Y1|A7P5Y1_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032704001 PE=4 SV=1 Length = 891
Score = 90.9 bits (224), Expect = 4e-17 Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 9/164 (5%) Frame = -3
Query: 503 SNHAGGQEDGGIGFSATERPDEHRIHKRMVEFLKKRVVLLERALNAEYHQESLEESKVEG 324 SN A +D + + E + +R VEF+KKRV+LLE+ALN EY +E + K Sbjct: 594 SNRAQLYQDSSVLYHFRE------MQRRQVEFIKKRVLLLEKALNTEYQKEYFGDIKSNE 647
Query: 323 EAMEDAGQTA-------PQATGNDAE--DSHPFLTLLAPEEISAYAYDNEPRRLEVARIY 171 A ED A P DA+ D P + ++A EEISA A D++P R E+AR+Y Sbjct: 648 IASEDPENEAKVIDISSPSNVEVDAQIMDQLPRIEVIASEEISATACDDKPERAEMARLY 707
Query: 170 NEICRTVNECEVDAAETYTGNKSAGIRLRKSSRQVDGLSIDMQK 39 NE+C+ + E ++ ++Y N+ A ++LRK ++ + D+ + Sbjct: 708 NEMCKVLAENVHESVQSYLANQPASLQLRKKLLPLEAICEDINR 751
>tr|A5BRA6|A5BRA6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043255 PE=4 SV=1 Length = 755
Score = 90.9 bits (224), Expect = 4e-17 Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 9/164 (5%) Frame = -3
Query: 503 SNHAGGQEDGGIGFSATERPDEHRIHKRMVEFLKKRVVLLERALNAEYHQESLEESKVEG 324 SN A +D + + E + +R VEF+KKRV+LLE+ALN EY +E + K Sbjct: 458 SNRAQLYQDSSVLYHFRE------MQRRQVEFIKKRVLLLEKALNTEYQKEYFGDIKSNE 511
Query: 323 EAMEDAGQTA-------PQATGNDAE--DSHPFLTLLAPEEISAYAYDNEPRRLEVARIY 171 A ED A P DA+ D P + ++A EEISA A D++P R E+AR+Y Sbjct: 512 IASEDPENEAKVIDISSPSNVEVDAQIMDQLPRIEVIASEEISATACDDKPERAEMARLY 571
Query: 170 NEICRTVNECEVDAAETYTGNKSAGIRLRKSSRQVDGLSIDMQK 39 NE+C+ + E ++ ++Y N+ A ++LRK ++ + D+ + Sbjct: 572 NEMCKVLAENVHESVQSYLANQPASLQLRKKLLPLEAICEDINR 615
>tr|Q6YNJ6|Q6YNJ6_ORYSA Chromatin-remodeling factor CHD3 OS=Oryza sativa GN=PKL PE=2 SV=1 Length = 1360
Score = 43.9 bits (102), Expect = 0.006 Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 1/137 (0%) Frame = -3
Query: 425 KRMVEFLKKRVVLLERALNAEYHQESLEESKVEGEAMED-AGQTAPQATGNDAEDSHPFL 249 +++VEF++KR LLER LN EY + + A +D G P D + L Sbjct: 1163 RKIVEFIRKRYHLLERCLNLEYAVIKTKTPVPDDLAEQDFPGGHRPAVP--DYSEMLREL 1220
Query: 248 TLLAPEEISAYAYDNEPRRLEVARIYNEICRTVNECEVDAAETYTGNKSAGIRLRKSSRQ 69 +L P A + + +V+ +YN++C + + V A ++ G+K+A L S + Sbjct: 1221 PVLEPIS-KEVAPEGTTDQSQVSHLYNKMCFVLEDSAVPALNSHFGDKAASSGLANSLHK 1279
Query: 68 VDGLSIDMQKAFVSFQS 18 + + D+ + S ++ Sbjct: 1280 FEAVCEDVSRILRSHEN 1296
>tr|Q5SML0|Q5SML0_ORYSJ Chromatin-remodeling factor CHD3 OS=Oryza sativa subsp. japonica GN=OSJNBb0036B04.22 PE=4 SV=1 Length = 1354
Score = 43.9 bits (102), Expect = 0.006 Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 1/137 (0%) Frame = -3
Query: 425 KRMVEFLKKRVVLLERALNAEYHQESLEESKVEGEAMED-AGQTAPQATGNDAEDSHPFL 249 +++VEF++KR LLER LN EY + + A +D G P D + L Sbjct: 1157 RKIVEFIRKRYHLLERCLNLEYAVIKTKTPVPDDLAEQDFPGGHRPAVP--DYSEMLREL 1214
Query: 248 TLLAPEEISAYAYDNEPRRLEVARIYNEICRTVNECEVDAAETYTGNKSAGIRLRKSSRQ 69 +L P A + + +V+ +YN++C + + V A ++ G+K+A L S + Sbjct: 1215 PVLEPIS-KEVAPEGTTDQSQVSHLYNKMCFVLEDSAVPALNSHFGDKAASSGLANSLHK 1273
Query: 68 VDGLSIDMQKAFVSFQS 18 + + D+ + S ++ Sbjct: 1274 FEAVCEDVSRILRSHEN 1290
>tr|Q0DE21|Q0DE21_ORYSJ Os06g0183800 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os06g0183800 PE=4 SV=1 Length = 1335
Score = 43.9 bits (102), Expect = 0.006 Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 1/137 (0%) Frame = -3
Query: 425 KRMVEFLKKRVVLLERALNAEYHQESLEESKVEGEAMED-AGQTAPQATGNDAEDSHPFL 249 +++VEF++KR LLER LN EY + + A +D G P D + L Sbjct: 1138 RKIVEFIRKRYHLLERCLNLEYAVIKTKTPVPDDLAEQDFPGGHRPAVP--DYSEMLREL 1195
Query: 248 TLLAPEEISAYAYDNEPRRLEVARIYNEICRTVNECEVDAAETYTGNKSAGIRLRKSSRQ 69 +L P A + + +V+ +YN++C + + V A ++ G+K+A L S + Sbjct: 1196 PVLEPIS-KEVAPEGTTDQSQVSHLYNKMCFVLEDSAVPALNSHFGDKAASSGLANSLHK 1254
Query: 68 VDGLSIDMQKAFVSFQS 18 + + D+ + S ++ Sbjct: 1255 FEAVCEDVSRILRSHEN 1271
>tr|B8B3I5|B8B3I5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21929 PE=4 SV=1 Length = 1309
Score = 43.9 bits (102), Expect = 0.006 Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 1/137 (0%) Frame = -3
Query: 425 KRMVEFLKKRVVLLERALNAEYHQESLEESKVEGEAMED-AGQTAPQATGNDAEDSHPFL 249 +++VEF++KR LLER LN EY + + A +D G P D + L Sbjct: 1112 RKIVEFIRKRYHLLERCLNLEYAVIKTKTPVPDDLAEQDFPGGHRPAVP--DYSEMLREL 1169
Query: 248 TLLAPEEISAYAYDNEPRRLEVARIYNEICRTVNECEVDAAETYTGNKSAGIRLRKSSRQ 69 +L P A + + +V+ +YN++C + + V A ++ G+K+A L S + Sbjct: 1170 PVLEPIS-KEVAPEGTTDQSQVSHLYNKMCFVLEDSAVPALNSHFGDKAASSGLANSLHK 1228
Query: 68 VDGLSIDMQKAFVSFQS 18 + + D+ + S ++ Sbjct: 1229 FEAVCEDVSRILRSHEN 1245
>tr|A3B915|A3B915_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_019537 PE=4 SV=1 Length = 1364
Score = 43.9 bits (102), Expect = 0.006 Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 1/137 (0%) Frame = -3
Query: 425 KRMVEFLKKRVVLLERALNAEYHQESLEESKVEGEAMED-AGQTAPQATGNDAEDSHPFL 249 +++VEF++KR LLER LN EY + + A +D G P D + L Sbjct: 1167 RKIVEFIRKRYHLLERCLNLEYAVIKTKTPVPDDLAEQDFPGGHRPAVP--DYSEMLREL 1224
Query: 248 TLLAPEEISAYAYDNEPRRLEVARIYNEICRTVNECEVDAAETYTGNKSAGIRLRKSSRQ 69 +L P A + + +V+ +YN++C + + V A ++ G+K+A L S + Sbjct: 1225 PVLEPIS-KEVAPEGTTDQSQVSHLYNKMCFVLEDSAVPALNSHFGDKAASSGLANSLHK 1283
Query: 68 VDGLSIDMQKAFVSFQS 18 + + D+ + S ++ Sbjct: 1284 FEAVCEDVSRILRSHEN 1300
>tr|A9RX41|A9RX41_PHYPA SNF2 family DNA-dependent ATPase (Fragment) OS=Physcomitrella patens subsp. patens GN=CHR1512 PE=4 SV=1 Length = 1220
Score = 43.5 bits (101), Expect = 0.007 Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Frame = -3
Query: 494 AGGQEDG--GIGFSATERPDEHRIHKRMVEFLKKRVVLLERALNAEYH 357 A E+G G+ A E + KRMV+F+K+RV++LE+ LNAEYH Sbjct: 1167 APADEEGPPGLPVGADREEREAYLQKRMVDFVKRRVLVLEKVLNAEYH 1214
>tr|A9TI22|A9TI22_PHYPA SNF2 family DNA-dependent ATPase (Fragment) OS=Physcomitrella patens subsp. patens GN=CHR1504 PE=4 SV=1 Length = 1245
Score = 43.1 bits (100), Expect = 0.009 Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 4/63 (6%) Frame = -3
Query: 533 EVAGQAVGIN--SNHAGGQEDGGIGFSATERPDEHR--IHKRMVEFLKKRVVLLERALNA 366 ++AG + N S +++G G A +E + KRMV+F+K+RV++LE+ LNA Sbjct: 1150 DIAGPSKNGNARSTPVPAEDEGPSGLPAEADREEREAYLQKRMVDFVKRRVLVLEKVLNA 1209
Query: 365 EYH 357 EYH Sbjct: 1210 EYH 1212
>tr|Q9SZ57|Q9SZ57_ARATH Putative uncharacterized protein AT4g31900 OS=Arabidopsis thaliana GN=AT4g31900 PE=2 SV=1 Length = 1067
Score = 41.6 bits (96), Expect = 0.028 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 16/160 (10%) Frame = -3
Query: 548 SFPKEEVAGQAVGINSNHAGGQ-----EDGGIGFSATE--------RPDEHRIHKRMVEF 408 +F KEE + S H G+ ED IGF PD KR+ + Sbjct: 875 AFSKEEHDRILIPAVSKHGYGRWVAIVEDEEIGFQEVACKDLNIPFPPDTKSARKRICDH 934
Query: 407 LKKRVVLLERALNAEYHQESLEE---SKVEGEAMEDAGQTAPQATGNDAEDSHPFLTLLA 237 + KRV +E A+ EY ++ L E ++ +G + DA + + ND + Sbjct: 935 VGKRVKKMEDAIKYEYAEKILAEQAKAETKGTSFVDAEK---EMLKNDP---------IT 982
Query: 236 PEEISAYAYDNEPRRLEVARIYNEICRTVNECEVDAAETY 117 ++ SA A DN+ R+E+A+ Y++ +VNE ++ +TY Sbjct: 983 SKKNSATAVDNKQGRVEMAQSYDQ---SVNEKSGESFQTY 1019
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