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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919171
Clone id YMU001_000122_A10
Library
Length 473
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000122_A10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ATCGGGTACTCCTTGGTCATAAGGAAGCACAGACTCTGAGCAGCTTATATGTTAACGAGC
ATTGTTTCAAGCAAAGGGTGTGGGTTATGGGGGCACGTCCGAATGAAGAGGAGATTTTCG
AGTTCACTCTGTTGCAGAGAGTTGGTGGCTGCTGGGATGGCTATTGGTTAACTCAAAGCC
TTCGCCATGATGGTGATGGCATCAGTGGTGGTATAGCTTACTAGTTCGCTATTGAACTAG
TTTTGGTGGGTCGTTGTTCTGTACATATATTACCGGGGATCGCATCACTTCGTGCTACAA
AGGAAGAAGAGAGTATTTGGAGCTGGCGAGAGGCTTGTACATAGTAGGGATACAGGAGTA
TAGACATGATCCCCATGGCAATTTGTAATGTGCGCTATGGCTTCTTGAGCTCTAGGGCTC
ACCTCCAGGAGTCAAATGTATCATTGCAGGAAAATCTTCCGGAGTAAATTAGA
■■Homology search results ■■ -
sp_hit_id Q2S3W3
Definition sp|Q2S3W3|SYR_SALRD Arginyl-tRNA synthetase OS=Salinibacter ruber (strain DSM 13855)
Align length 29
Score (bit) 30.4
E-value 4.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919171|Adiantum capillus-veneris mRNA, clone:
YMU001_000122_A10.
         (473 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q2S3W3|SYR_SALRD Arginyl-tRNA synthetase OS=Salinibacter rube...    30   4.2  
sp|Q9DBE8|ALG2_MOUSE Alpha-1,3-mannosyltransferase ALG2 OS=Mus m...    30   7.1  
sp|Q2JPC2|Y372_SYNJB UPF0182 protein CYB_0372 OS=Synechococcus s...    29   9.3  
sp|Q68UT4|MRAP_PANTR Melanocortin-2 receptor accessory protein O...    29   9.3  

>sp|Q2S3W3|SYR_SALRD Arginyl-tRNA synthetase OS=Salinibacter ruber
           (strain DSM 13855) GN=argS PE=3 SV=1
          Length = 562

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -2

Query: 346 YYVQASRQLQILSSSFVARSDAIPGNICT 260
           YY  A RQ+++L+ S  AR +A+ GN+ T
Sbjct: 162 YYNDAGRQMRVLAQSVRARYEALAGNVPT 190


>sp|Q9DBE8|ALG2_MOUSE Alpha-1,3-mannosyltransferase ALG2 OS=Mus
           musculus GN=Alg2 PE=2 SV=2
          Length = 415

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 18/53 (33%), Positives = 28/53 (52%)
 Frame = -3

Query: 405 RSHSAHYKLPWGSCLYSCIPTMYKPLASSKYSLLPL*HEVMRSPVIYVQNNDP 247
           RS S   K+   S L+ C+  +Y P ++  + ++PL    M+ PVI V N  P
Sbjct: 301 RSFSDRQKI---SLLHGCLCVLYTP-SNEHFGIVPLEAMYMQCPVIAVNNGGP 349


>sp|Q2JPC2|Y372_SYNJB UPF0182 protein CYB_0372 OS=Synechococcus sp.
           GN=CYB_0372 PE=3 SV=1
          Length = 847

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 209 WYSLLVRY*TSFGGSLFCTYITGDRITSCYKG 304
           W  ++ R+    G  LF   +TG  I SC++G
Sbjct: 44  WTRVIARWGLGLGAFLFALAVTGSNICSCWRG 75


>sp|Q68UT4|MRAP_PANTR Melanocortin-2 receptor accessory protein
           OS=Pan troglodytes GN=MRAP PE=3 SV=1
          Length = 172

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
 Frame = -3

Query: 453 FPAMIHLTPGGEP*SSRSHSAHYKLPWGS------CLYSCIPTMYKPLASSK 316
           F  +++++  G P    S   H   PW        C+  C+P   +PLA+S+
Sbjct: 54  FLILLYMSWSGSPQMRNSPKHHQTCPWSHGLNLHLCIQKCLPCHREPLATSQ 105
tr_hit_id A9T6I0
Definition tr|A9T6I0|A9T6I0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 73
Score (bit) 125.0
E-value 1.0e-27
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919171|Adiantum capillus-veneris mRNA, clone:
YMU001_000122_A10.
         (473 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9T6I0|A9T6I0_PHYPA Predicted protein OS=Physcomitrella paten...   125   1e-27
tr|B6THC8|B6THC8_MAIZE Putative uncharacterized protein OS=Zea m...   119   1e-25
tr|Q6NM03|Q6NM03_ARATH At2g25605 (Putative uncharacterized prote...   117   3e-25
tr|A7P5K4|A7P5K4_VITVI Chromosome chr4 scaffold_6, whole genome ...   115   1e-24
tr|Q0DFR7|Q0DFR7_ORYSJ Os05g0574700 protein OS=Oryza sativa subs...   108   1e-22
tr|B8AWV6|B8AWV6_ORYSI Putative uncharacterized protein OS=Oryza...   108   1e-22
tr|A5BJE9|A5BJE9_VITVI Putative uncharacterized protein OS=Vitis...    98   2e-19
tr|A3B727|A3B727_ORYSJ Putative uncharacterized protein OS=Oryza...    77   3e-13
tr|A8JI05|A8JI05_CHLRE Predicted protein OS=Chlamydomonas reinha...    51   3e-05
tr|Q7N5Y6|Q7N5Y6_PHOLL Similar to unknown protein OS=Photorhabdu...    34   3.2  
tr|Q3L9Z7|Q3L9Z7_RHOE4 Hypothetical membrane protein OS=Rhodococ...    34   3.2  
tr|Q7U2J4|Q7U2J4_MYCBO PROBABLE CONSERVED TRANSMEMBRANE PROTEIN ...    34   4.2  
tr|P96401|P96401_MYCTU PROBABLE CONSERVED TRANSMEMBRANE PROTEIN ...    34   4.2  
tr|A5TYU4|A5TYU4_MYCTA Putative conserved transmembrane protein ...    34   4.2  
tr|A1KF39|A1KF39_MYCBP Probable conserved transmembrane protein ...    34   4.2  
tr|A4KNP0|A4KNP0_MYCTU Conserved transmembrane protein OS=Mycoba...    34   4.2  
tr|A2VND9|A2VND9_MYCTU Putative uncharacterized protein OS=Mycob...    34   4.2  
tr|A1QMZ6|A1QMZ6_MYCTF Putative uncharacterized protein (Conserv...    34   4.2  
tr|A8RFI9|A8RFI9_9FIRM Putative uncharacterized protein OS=Eubac...    33   5.4  

>tr|A9T6I0|A9T6I0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_219361 PE=4 SV=1
          Length = 230

 Score =  125 bits (314), Expect = 1e-27
 Identities = 56/73 (76%), Positives = 64/73 (87%)
 Frame = +3

Query: 3   RVLLGHKEAQTLSSLYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSL 182
           RVLL H + + LSSL+VNEHCFKQRV ++GARP EEEI+EFTL QR+GG WDGYWLTQSL
Sbjct: 158 RVLLNHTDRRILSSLFVNEHCFKQRVCIVGARPGEEEIYEFTLAQRIGGNWDGYWLTQSL 217

Query: 183 RHDGDGISGGIAY 221
           RHDG+G SGGIAY
Sbjct: 218 RHDGEGASGGIAY 230


>tr|B6THC8|B6THC8_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 211

 Score =  119 bits (297), Expect = 1e-25
 Identities = 54/73 (73%), Positives = 63/73 (86%)
 Frame = +3

Query: 3   RVLLGHKEAQTLSSLYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSL 182
           RVLLGH+E + LSSL+V E+ FKQRVWV GARP EEEIF+FT++QRVGG WDGYWLT+SL
Sbjct: 139 RVLLGHRERRILSSLWVEENQFKQRVWVQGARPEEEEIFQFTMVQRVGGSWDGYWLTESL 198

Query: 183 RHDGDGISGGIAY 221
            +DGD  SGGIAY
Sbjct: 199 INDGDAFSGGIAY 211


>tr|Q6NM03|Q6NM03_ARATH At2g25605 (Putative uncharacterized protein)
           OS=Arabidopsis thaliana GN=At2g25605 PE=2 SV=1
          Length = 200

 Score =  117 bits (293), Expect = 3e-25
 Identities = 51/73 (69%), Positives = 61/73 (83%)
 Frame = +3

Query: 3   RVLLGHKEAQTLSSLYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSL 182
           RVLLGHK+ + LSSL+V E+ FKQR+W+ G RP EEEIFEFT+ QR+GG WDGYWLT+SL
Sbjct: 128 RVLLGHKDRKLLSSLFVEENRFKQRIWIQGNRPEEEEIFEFTMFQRIGGSWDGYWLTESL 187

Query: 183 RHDGDGISGGIAY 221
            HDGD  SGG+AY
Sbjct: 188 LHDGDVFSGGMAY 200


>tr|A7P5K4|A7P5K4_VITVI Chromosome chr4 scaffold_6, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00032568001
           PE=4 SV=1
          Length = 200

 Score =  115 bits (288), Expect = 1e-24
 Identities = 51/73 (69%), Positives = 60/73 (82%)
 Frame = +3

Query: 3   RVLLGHKEAQTLSSLYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSL 182
           RVLL H+E + LSSL+V E+ FKQRVW+ G RP EEEIF+FT+ QRVGG WDGYWLT+SL
Sbjct: 128 RVLLCHRERKILSSLWVKENRFKQRVWIRGTRPEEEEIFQFTMFQRVGGSWDGYWLTESL 187

Query: 183 RHDGDGISGGIAY 221
            HDGD  SGG+AY
Sbjct: 188 LHDGDSFSGGVAY 200


>tr|Q0DFR7|Q0DFR7_ORYSJ Os05g0574700 protein OS=Oryza sativa subsp.
           japonica GN=Os05g0574700 PE=2 SV=1
          Length = 218

 Score =  108 bits (270), Expect = 1e-22
 Identities = 50/74 (67%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
 Frame = +3

Query: 3   RVLLGHKEAQTLSSLYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSL 182
           RVLL HKE   LSSL+V E+ +KQRVWV G+RP EE IF+FT++QRVGG WDGYWLT+SL
Sbjct: 145 RVLLAHKERTILSSLWVEENLYKQRVWVRGSRPEEEAIFQFTMVQRVGGSWDGYWLTESL 204

Query: 183 -RHDGDGISGGIAY 221
              DGD +SGG+AY
Sbjct: 205 INDDGDALSGGLAY 218


>tr|B8AWV6|B8AWV6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_21087 PE=4 SV=1
          Length = 215

 Score =  108 bits (270), Expect = 1e-22
 Identities = 50/74 (67%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
 Frame = +3

Query: 3   RVLLGHKEAQTLSSLYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSL 182
           RVLL HKE   LSSL+V E+ +KQRVWV G+RP EE IF+FT++QRVGG WDGYWLT+SL
Sbjct: 142 RVLLAHKERTILSSLWVEENLYKQRVWVRGSRPEEEAIFQFTMVQRVGGSWDGYWLTESL 201

Query: 183 -RHDGDGISGGIAY 221
              DGD +SGG+AY
Sbjct: 202 INDDGDALSGGLAY 215


>tr|A5BJE9|A5BJE9_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_004444 PE=4 SV=1
          Length = 166

 Score = 98.2 bits (243), Expect = 2e-19
 Identities = 47/73 (64%), Positives = 56/73 (76%)
 Frame = +3

Query: 3   RVLLGHKEAQTLSSLYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSL 182
           RVLL H+E + LSSL+V E+ FKQRVW+ G RP EEEIF+FT+   V   WDGYWLT+SL
Sbjct: 96  RVLLCHRERKILSSLWVKENRFKQRVWIRGTRPEEEEIFQFTIGLVVP--WDGYWLTESL 153

Query: 183 RHDGDGISGGIAY 221
            HDGD  SGG+AY
Sbjct: 154 LHDGDSFSGGVAY 166


>tr|A3B727|A3B727_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_018849 PE=4 SV=1
          Length = 269

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 33/53 (62%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
 Frame = +3

Query: 51  VNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSL-RHDGDGIS 206
           + ++ +KQRVWV G+RP EE IF+FT++QRVGG WDGYWLT+SL   DGD +S
Sbjct: 172 LGQNLYKQRVWVRGSRPEEEAIFQFTMVQRVGGSWDGYWLTESLINDDGDALS 224


>tr|A8JI05|A8JI05_CHLRE Predicted protein OS=Chlamydomonas
           reinhardtii GN=CHLREDRAFT_180553 PE=4 SV=1
          Length = 169

 Score = 50.8 bits (120), Expect = 3e-05
 Identities = 25/66 (37%), Positives = 37/66 (56%)
 Frame = +3

Query: 9   LLGHKEAQTLSSLYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSLRH 188
           LL +   + LS+L ++E C+  RV V      EE  +  TL QR+GGC+DGYW T     
Sbjct: 99  LLDNSGWEVLSTLQLSETCWCARVRVWDTHRLEERAYAITLTQRLGGCYDGYWYTDRWVC 158

Query: 189 DGDGIS 206
           +G  ++
Sbjct: 159 EGQDVN 164


>tr|Q7N5Y6|Q7N5Y6_PHOLL Similar to unknown protein OS=Photorhabdus
           luminescens subsp. laumondii GN=plu1793 PE=4 SV=1
          Length = 452

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
 Frame = +3

Query: 9   LLGHKEAQTLSSLYVNEHCF---KQRVWVMGARPNEEEIFEFTLLQRVGGCWD------- 158
           ++G +    L     NE C     Q++W+   R  ++E F+F   +R GG W        
Sbjct: 353 VVGIQNLIELKGWSANEDCALKRAQQLWLDPYRCQQDETFKF---EREGGDWKKEIAADF 409

Query: 159 GYWLTQSLRHD 191
            YWL QSL+H+
Sbjct: 410 SYWLNQSLKHE 420