BP919177 |
Clone id |
YMU001_000122_B04 |
Library |
YMU01 |
Length |
513 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000122_B04. |
Accession |
BP919177 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AAGACCATGCACTTGATATATAATAACTCGTGCGATAAGAACATCGTCGAGCATTCGCAT TGAAAATCTCTGGCTGTAAGGTATTGAAAAAAAAAATGAAAATCTAAGGAGCACAAAGAT TCCTCAAATCCTCATCTTTTGCAAACCAATCTGGGATTATCTTGGGTGCATGGGGATACA AATCCTTGTAGGAATTCCTTATGGTGCCCTCCGCAACTCCAGTGACGCGCGAGATATCTT TTAATGGTTTTGAGTCGTCTGATAATTGTGATATCATGTAGATGGCAGCCGCTGCGATCG AGATTGGGCTCCTCCTAATATCCAACTCCTCCGATTTCTTGACAACTTCGGTTGCAGCTT TTATGGACTGATTGCCCATGCCAAGATGCGAGCAGAATCTCCTCAAGAAGTCCCCGGCAT GTATGGTGCCCATTTCCATAGACTTGCCCATCTCTTCTTCCAGCTGCTTAACAATAAACT CTTGATCCCGTCCAATCTCCTTCTTTGATGCGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8W0W3 |
Definition |
sp|Q8W0W3|TF2B_ORYSJ Transcription initiation factor IIB OS=Oryza sativa subsp. japonica |
Align length |
135 |
Score (bit) |
192.0 |
E-value |
8.0e-49 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LMH3 |
Definition |
tr|B8LMH3|B8LMH3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
135 |
Score (bit) |
214.0 |
E-value |
2.0e-54 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919177|Adiantum capillus-veneris mRNA, clone: YMU001_000122_B04. (513 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LMH3|B8LMH3_PICSI Putative uncharacterized protein OS=Picea... 214 2e-54 tr|A7PQV4|A7PQV4_VITVI Chromosome chr6 scaffold_25, whole genome... 193 5e-48 tr|Q0J026|Q0J026_ORYSJ Os09g0534800 protein OS=Oryza sativa subs... 192 8e-48 tr|A2Z3G6|A2Z3G6_ORYSI Putative uncharacterized protein OS=Oryza... 192 8e-48 tr|B6THD9|B6THD9_MAIZE Transcription initiation factor IIB OS=Ze... 188 2e-46 tr|B4FRH0|B4FRH0_MAIZE Putative uncharacterized protein OS=Zea m... 188 2e-46 tr|B4FHS1|B4FHS1_MAIZE Putative uncharacterized protein OS=Zea m... 187 3e-46 tr|A7PWI7|A7PWI7_VITVI Chromosome chr8 scaffold_34, whole genome... 186 8e-46 tr|A7QJY1|A7QJY1_VITVI Chromosome undetermined scaffold_109, who... 184 2e-45 tr|A5BBG2|A5BBG2_VITVI Putative uncharacterized protein (Fragmen... 184 2e-45 tr|A9T0Q7|A9T0Q7_PHYPA Predicted protein OS=Physcomitrella paten... 183 5e-45 tr|Q53YT9|Q53YT9_ARATH TFIIB2 (Fragment) OS=Arabidopsis thaliana... 177 2e-43 tr|Q53YU0|Q53YU0_ARATH TFIIB1 (Fragment) OS=Arabidopsis thaliana... 171 1e-41 tr|A9RXM3|A9RXM3_PHYPA Predicted protein OS=Physcomitrella paten... 142 1e-32 tr|Q5KQD1|Q5KQD1_ORYSJ Os05g0548200 protein OS=Oryza sativa subs... 96 8e-19 tr|A3B6H1|A3B6H1_ORYSJ Putative uncharacterized protein OS=Oryza... 96 8e-19 tr|A2Y747|A2Y747_ORYSI Putative uncharacterized protein OS=Oryza... 96 8e-19 tr|Q6S7A3|Q6S7A3_ARATH Mutant TFIIB3 (Fragment) OS=Arabidopsis t... 89 1e-16 tr|Q9LIA6|Q9LIA6_ARATH Transcription initiation factor IIB (TFII... 88 3e-16 tr|Q63ZH4|Q63ZH4_XENLA LOC494830 protein OS=Xenopus laevis GN=gt... 82 1e-14 tr|Q28G23|Q28G23_XENTR General transcription factor IIBgeneral t... 82 1e-14 tr|Q9M2L0|Q9M2L0_ARATH Putative uncharacterized protein F28O9.22... 82 2e-14 tr|B4NZP8|B4NZP8_DROYA GE18945 OS=Drosophila yakuba GN=GE18945 P... 81 3e-14 tr|Q6B512|Q6B512_OREMO General transcription factor II B OS=Oreo... 80 4e-14 tr|Q4SSL3|Q4SSL3_TETNG Chromosome 15 SCAF14367, whole genome sho... 80 4e-14 tr|Q1PEE4|Q1PEE4_ARATH Transcription factor IIB family protein O... 80 4e-14 tr|A0MF31|A0MF31_ARATH Putative uncharacterized protein (Fragmen... 80 4e-14 tr|B4HWP7|B4HWP7_DROSE GM18405 OS=Drosophila sechellia GN=GM1840... 80 4e-14 tr|Q7SX98|Q7SX98_DANRE General transcription factor IIB OS=Danio... 80 6e-14 tr|B5XD83|B5XD83_SALSA Transcription initiation factor IIB OS=Sa... 80 6e-14
>tr|B8LMH3|B8LMH3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 313
Score = 214 bits (545), Expect = 2e-54 Identities = 105/135 (77%), Positives = 117/135 (86%) Frame = -3
Query: 511 ASKKEIGRDQEFIVKQLEEEMGKSMEMGTIHAGDFLRRFCSHLGMGNQSIKAATEVVKKS 332 ASKKE+GR +EFIVKQLEEEMGKSMEMGTIHAGDFLRRFCSHLGMG+Q++KAATE VKKS Sbjct: 179 ASKKEVGRAKEFIVKQLEEEMGKSMEMGTIHAGDFLRRFCSHLGMGHQAVKAATEAVKKS 238
Query: 331 EELDXXXXXXXXXXXXIYMISQLSDDSKPLKDISRVTGVAEGTIRNSYKDLYPHAPKIIP 152 EELD IYMISQLS++ K L+DISR TGVAEGTIRNSYKDLYPHA ++IP Sbjct: 239 EELDIRRSPISIAAAAIYMISQLSEEKKLLRDISRATGVAEGTIRNSYKDLYPHAARLIP 298
Query: 151 DWFAKDEDLRNLCAP 107 DWFAK+EDL+NLCAP Sbjct: 299 DWFAKEEDLKNLCAP 313
>tr|A7PQV4|A7PQV4_VITVI Chromosome chr6 scaffold_25, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022213001 PE=4 SV=1 Length = 314
Score = 193 bits (490), Expect = 5e-48 Identities = 98/135 (72%), Positives = 111/135 (82%) Frame = -3
Query: 511 ASKKEIGRDQEFIVKQLEEEMGKSMEMGTIHAGDFLRRFCSHLGMGNQSIKAATEVVKKS 332 A+KKEIGR +E+IVKQLE EMG+SMEMGTIHAGDFLRRFCSHLGM NQ++KAA E V+KS Sbjct: 180 ATKKEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNQAVKAAQEAVQKS 239
Query: 331 EELDXXXXXXXXXXXXIYMISQLSDDSKPLKDISRVTGVAEGTIRNSYKDLYPHAPKIIP 152 EELD IYMI+QLSDD K LKDIS TGVAEGTIRNSYKDLYP+A +IIP Sbjct: 240 EELDIRRSPISVAAAVIYMITQLSDDKKLLKDISLATGVAEGTIRNSYKDLYPYASRIIP 299
Query: 151 DWFAKDEDLRNLCAP 107 +AK+EDLRNLC+P Sbjct: 300 SSYAKEEDLRNLCSP 314
>tr|Q0J026|Q0J026_ORYSJ Os09g0534800 protein OS=Oryza sativa subsp. japonica GN=Os09g0534800 PE=4 SV=1 Length = 312
Score = 192 bits (488), Expect = 8e-48 Identities = 96/135 (71%), Positives = 111/135 (82%) Frame = -3
Query: 511 ASKKEIGRDQEFIVKQLEEEMGKSMEMGTIHAGDFLRRFCSHLGMGNQSIKAATEVVKKS 332 A+KKEIGR +EFIVKQLE EMG+SMEMGTIHAGDFLRRFCS LGM NQ++KAA E V++S Sbjct: 178 ATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRS 237
Query: 331 EELDXXXXXXXXXXXXIYMISQLSDDSKPLKDISRVTGVAEGTIRNSYKDLYPHAPKIIP 152 EELD IYMI+QLSDD KPLKDIS TGVAEGTIRNSYKDLYP+A ++IP Sbjct: 238 EELDIRRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIP 297
Query: 151 DWFAKDEDLRNLCAP 107 + +AK+EDL+NLC P Sbjct: 298 NTYAKEEDLKNLCTP 312
>tr|A2Z3G6|A2Z3G6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32170 PE=4 SV=1 Length = 312
Score = 192 bits (488), Expect = 8e-48 Identities = 96/135 (71%), Positives = 111/135 (82%) Frame = -3
Query: 511 ASKKEIGRDQEFIVKQLEEEMGKSMEMGTIHAGDFLRRFCSHLGMGNQSIKAATEVVKKS 332 A+KKEIGR +EFIVKQLE EMG+SMEMGTIHAGDFLRRFCS LGM NQ++KAA E V++S Sbjct: 178 ATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRS 237
Query: 331 EELDXXXXXXXXXXXXIYMISQLSDDSKPLKDISRVTGVAEGTIRNSYKDLYPHAPKIIP 152 EELD IYMI+QLSDD KPLKDIS TGVAEGTIRNSYKDLYP+A ++IP Sbjct: 238 EELDIRRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIP 297
Query: 151 DWFAKDEDLRNLCAP 107 + +AK+EDL+NLC P Sbjct: 298 NTYAKEEDLKNLCTP 312
>tr|B6THD9|B6THD9_MAIZE Transcription initiation factor IIB OS=Zea mays PE=2 SV=1 Length = 312
Score = 188 bits (477), Expect = 2e-46 Identities = 94/135 (69%), Positives = 110/135 (81%) Frame = -3
Query: 511 ASKKEIGRDQEFIVKQLEEEMGKSMEMGTIHAGDFLRRFCSHLGMGNQSIKAATEVVKKS 332 A+KKEIGR +EFIVKQLE EMG+SMEMGTIHAGDFLRRFCS LGM NQ++ AA E V++S Sbjct: 178 ATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMTNQAVNAAKEAVQRS 237
Query: 331 EELDXXXXXXXXXXXXIYMISQLSDDSKPLKDISRVTGVAEGTIRNSYKDLYPHAPKIIP 152 EELD IYMI+QLS+D KPLKDIS TGVAEGTIRNSYKDLYP+A ++IP Sbjct: 238 EELDIRRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIP 297
Query: 151 DWFAKDEDLRNLCAP 107 + +AK+EDL+NLC P Sbjct: 298 NTYAKEEDLKNLCTP 312
>tr|B4FRH0|B4FRH0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 198
Score = 188 bits (477), Expect = 2e-46 Identities = 94/135 (69%), Positives = 110/135 (81%) Frame = -3
Query: 511 ASKKEIGRDQEFIVKQLEEEMGKSMEMGTIHAGDFLRRFCSHLGMGNQSIKAATEVVKKS 332 A+KKEIGR +EFIVKQLE EMG+SMEMGTIHAGDFLRRFCS LGM NQ++ AA E V++S Sbjct: 64 ATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMTNQAVNAAKEAVQRS 123
Query: 331 EELDXXXXXXXXXXXXIYMISQLSDDSKPLKDISRVTGVAEGTIRNSYKDLYPHAPKIIP 152 EELD IYMI+QLS+D KPLKDIS TGVAEGTIRNSYKDLYP+A ++IP Sbjct: 124 EELDIRRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIP 183
Query: 151 DWFAKDEDLRNLCAP 107 + +AK+EDL+NLC P Sbjct: 184 NTYAKEEDLKNLCTP 198
>tr|B4FHS1|B4FHS1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 312
Score = 187 bits (474), Expect = 3e-46 Identities = 93/135 (68%), Positives = 110/135 (81%) Frame = -3
Query: 511 ASKKEIGRDQEFIVKQLEEEMGKSMEMGTIHAGDFLRRFCSHLGMGNQSIKAATEVVKKS 332 A+KKEIGR +EFIVKQLE EMG+SMEMGTIHAG+FLRRFCS LGM NQ+++AA + VK S Sbjct: 178 ATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGNFLRRFCSTLGMNNQAVRAAQDAVKHS 237
Query: 331 EELDXXXXXXXXXXXXIYMISQLSDDSKPLKDISRVTGVAEGTIRNSYKDLYPHAPKIIP 152 EELD IYMI+QLS+D KPLKDIS TGVAEGTIRNSYKDLYP+A ++IP Sbjct: 238 EELDIRRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIP 297
Query: 151 DWFAKDEDLRNLCAP 107 + +AK+EDL+NLC P Sbjct: 298 NTYAKEEDLKNLCTP 312
>tr|A7PWI7|A7PWI7_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025627001 PE=4 SV=1 Length = 312
Score = 186 bits (471), Expect = 8e-46 Identities = 92/135 (68%), Positives = 108/135 (80%) Frame = -3
Query: 511 ASKKEIGRDQEFIVKQLEEEMGKSMEMGTIHAGDFLRRFCSHLGMGNQSIKAATEVVKKS 332 A+KKEIGR +E+IVKQLE E G+S+EMGTIHAGDF+RRFCS+LGM NQ +KAA E V+KS Sbjct: 178 ATKKEIGRAKEYIVKQLEAEKGQSVEMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKS 237
Query: 331 EELDXXXXXXXXXXXXIYMISQLSDDSKPLKDISRVTGVAEGTIRNSYKDLYPHAPKIIP 152 EE D IY+I+QLSD+ K L+DIS TGVAEGTIRNSYKDLYPH KIIP Sbjct: 238 EEFDIRRSPVSIAAAVIYIITQLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISKIIP 297
Query: 151 DWFAKDEDLRNLCAP 107 W+AK+EDLRNLC+P Sbjct: 298 SWYAKEEDLRNLCSP 312
>tr|A7QJY1|A7QJY1_VITVI Chromosome undetermined scaffold_109, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000846001 PE=4 SV=1 Length = 312
Score = 184 bits (468), Expect = 2e-45 Identities = 91/135 (67%), Positives = 108/135 (80%) Frame = -3
Query: 511 ASKKEIGRDQEFIVKQLEEEMGKSMEMGTIHAGDFLRRFCSHLGMGNQSIKAATEVVKKS 332 A+KKEIGR +E+IVKQLE E G+S+EMGTIHAGDF+RRFCS+LGM NQ +KAA E V+KS Sbjct: 178 ATKKEIGRAKEYIVKQLEAEKGQSVEMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKS 237
Query: 331 EELDXXXXXXXXXXXXIYMISQLSDDSKPLKDISRVTGVAEGTIRNSYKDLYPHAPKIIP 152 EE D IY+I+QLSD+ K L+DIS TGVAEGTIRNSYKDLYPH +IIP Sbjct: 238 EEFDIRRSPVSIAAAVIYIITQLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISRIIP 297
Query: 151 DWFAKDEDLRNLCAP 107 W+AK+EDLRNLC+P Sbjct: 298 SWYAKEEDLRNLCSP 312
>tr|A5BBG2|A5BBG2_VITVI Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_004775 PE=4 SV=1 Length = 312
Score = 184 bits (468), Expect = 2e-45 Identities = 91/135 (67%), Positives = 108/135 (80%) Frame = -3
Query: 511 ASKKEIGRDQEFIVKQLEEEMGKSMEMGTIHAGDFLRRFCSHLGMGNQSIKAATEVVKKS 332 A+KKEIGR +E+IVKQLE E G+S+EMGTIHAGDF+RRFCS+LGM NQ +KAA E V+KS Sbjct: 178 ATKKEIGRAKEYIVKQLEAEKGQSVEMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKS 237
Query: 331 EELDXXXXXXXXXXXXIYMISQLSDDSKPLKDISRVTGVAEGTIRNSYKDLYPHAPKIIP 152 EE D IY+I+QLSD+ K L+DIS TGVAEGTIRNSYKDLYPH +IIP Sbjct: 238 EEFDIRRSPVSIAAAVIYIITQLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISRIIP 297
Query: 151 DWFAKDEDLRNLCAP 107 W+AK+EDLRNLC+P Sbjct: 298 SWYAKEEDLRNLCSP 312
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