BP919183
Clone id YMU001_000122_B10
Library
Length 484
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000122_B10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AAGCCCATGCAAAAAGTTATCCTCATGTGAAGCACTTTGAACAAAATAACAGCATCACAA
CTGGAATCAGCAGGTACACTCTAACGATTGCACCAATTTTGTGCCCATGCTGCTGATGCC
CATGCGTCTCAAAACCGCAGACATTGCAAAACTTACAATTCAGTCCAATCAAGAAGCACA
ATGACCTTCCTCCATGAAAGTGTTTAGCTCCATAAAGAAAGGGCTTTCACTTTGATCTCT
CCTTCCCTCTGCCACTTCTTTATACTCTGCTATCAGCTTCTCCCACTTCTCTCTACATTG
CCTTCCATCTCGGTGGATGTCTTGTGCACTCAAAGTCTCTGCTAGCTCTTCCCACAACTC
CGCCCTCCTTGCGGGCATACTAAACTTGCTGCCCATTTCCATCCTGACCTTAATCAACTC
CAAGACCTCCGACCTCTTCCAGTTTTTAGACCTTTATTTCAAGCCCCCTTGTTCATCAGA
CGTA
■■Homology search results ■■ -
sp_hit_id Q7ZY56
Definition sp|Q7ZY56|HEAT6_XENLA HEAT repeat-containing protein 6 OS=Xenopus laevis
Align length 28
Score (bit) 30.8
E-value 3.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919183|Adiantum capillus-veneris mRNA, clone:
YMU001_000122_B10.
(484 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7ZY56|HEAT6_XENLA HEAT repeat-containing protein 6 OS=Xenopu... 31 3.4
sp|Q6N233|Y4217_RHOPA UPF0337 protein RPA4217 OS=Rhodopseudomona... 29 9.8

>sp|Q7ZY56|HEAT6_XENLA HEAT repeat-containing protein 6 OS=Xenopus
laevis GN=heatr6 PE=2 SV=1
Length = 1174

Score = 30.8 bits (68), Expect = 3.4
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1

Query: 352 PQLRPPCGHTKLAAHFHPDLNQLQDLRP 435
P L+PP H + A F LN+LQ LRP
Sbjct: 23 PSLQPPYNHQEYAWDFQRYLNKLQSLRP 50


>sp|Q6N233|Y4217_RHOPA UPF0337 protein RPA4217 OS=Rhodopseudomonas
palustris GN=RPA4217 PE=3 SV=1
Length = 66

Score = 29.3 bits (64), Expect = 9.8
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -2

Query: 294 REKWEKLIAEYKEVAEGRRDQSE 226
+EKW KL + +V EGRRDQ E
Sbjct: 18 KEKWGKLTDDDLDVIEGRRDQLE 40


tr_hit_id A9NRE1
Definition tr|A9NRE1|A9NRE1_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 98
Score (bit) 98.6
E-value 1.0e-19
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919183|Adiantum capillus-veneris mRNA, clone:
YMU001_000122_B10.
(484 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NRE1|A9NRE1_PICSI Putative uncharacterized protein OS=Picea... 99 1e-19
tr|A9RUD2|A9RUD2_PHYPA Predicted protein OS=Physcomitrella paten... 95 1e-18
tr|A9TGC8|A9TGC8_PHYPA Predicted protein OS=Physcomitrella paten... 84 5e-15
tr|A9RNY9|A9RNY9_PHYPA Predicted protein (Fragment) OS=Physcomit... 49 9e-05
tr|Q9FMV9|Q9FMV9_ARATH Genomic DNA, chromosome 5, P1 clone:MLE2 ... 49 2e-04
tr|Q84W56|Q84W56_ARATH Putative uncharacterized protein At5g6342... 49 2e-04
tr|Q67YC1|Q67YC1_ARATH Putative uncharacterized protein At5g6342... 49 2e-04
tr|A9SJK2|A9SJK2_PHYPA Predicted protein OS=Physcomitrella paten... 48 2e-04
tr|A7PHF3|A7PHF3_VITVI Chromosome chr17 scaffold_16, whole genom... 46 0.001
tr|A5C3R9|A5C3R9_VITVI Putative uncharacterized protein OS=Vitis... 46 0.001
tr|Q7XR86|Q7XR86_ORYSJ OSJNBa0011L07.15 protein OS=Oryza sativa ... 45 0.001
tr|Q0JBC9|Q0JBC9_ORYSJ Os04g0541100 protein (Fragment) OS=Oryza ... 45 0.001
tr|Q02227|Q02227_ORYSA Gt-2 OS=Oryza sativa PE=4 SV=1 45 0.001
tr|Q01IP4|Q01IP4_ORYSA H0115B09.8 protein OS=Oryza sativa GN=H01... 45 0.001
tr|B8ASL5|B8ASL5_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.001
tr|A3AW06|A3AW06_ORYSJ Putative uncharacterized protein OS=Oryza... 45 0.001
tr|A7QIZ6|A7QIZ6_VITVI Chromosome chr2 scaffold_105, whole genom... 45 0.002
tr|Q9C6K3|Q9C6K3_ARATH GT-like trihelix DNA-binding protein, put... 44 0.004
tr|Q6H6S9|Q6H6S9_ORYSJ Putative DNA-binding protein Gt-2 OS=Oryz... 44 0.005
tr|B8AG14|B8AG14_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.005
tr|A3A9L0|A3A9L0_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.005
tr|Q9LP25|Q9LP25_ARATH Putative GTL1 OS=Arabidopsis thaliana GN=... 43 0.007
tr|Q9C882|Q9C882_ARATH Trihelix DNA-binding protein (GTL1) OS=Ar... 43 0.007
tr|Q8W239|Q8W239_SOYBN GT-2 factor (Fragment) OS=Glycine max PE=... 43 0.007
tr|Q8L6Y5|Q8L6Y5_ARATH DNA-binding factor, putative (At1g33240) ... 43 0.007
tr|Q6YPG7|Q6YPG7_ORYSJ Os02g0104500 protein OS=Oryza sativa subs... 43 0.007
tr|O48590|O48590_ARATH GTL1 protein OS=Arabidopsis thaliana GN=G... 43 0.007
tr|A7P4T1|A7P4T1_VITVI Chromosome chr4 scaffold_6, whole genome ... 43 0.007
tr|A3A272|A3A272_ORYSJ Putative uncharacterized protein OS=Oryza... 43 0.007
tr|A2WZT7|A2WZT7_ORYSI Putative uncharacterized protein OS=Oryza... 43 0.007

>tr|A9NRE1|A9NRE1_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 378

Score = 98.6 bits (244), Expect = 1e-19
Identities = 49/98 (50%), Positives = 65/98 (66%)
Frame = -2

Query: 468 GGLK*RSKNWKRSEVLELIKVRMEMGSKFSMPXXXXXXXXXXXXXXXAQDIHRDGRQCRE 289
GG K RSKNWKR+EVL LIK R EM S+F+ A+ I RDG+QCRE
Sbjct: 278 GGPKKRSKNWKRAEVLRLIKFRAEMESRFAKSARRAALWEELAELLGAEGIKRDGKQCRE 337

Query: 288 KWEKLIAEYKEVAEGRRDQSESPFFMELNTFMEEGHCA 175
KW+KL+AE+K+V++G+RD+SESP++ EL + G A
Sbjct: 338 KWDKLMAEFKDVSDGKRDRSESPYYAELTATVGPGRSA 375



Score = 77.0 bits (188), Expect = 4e-13
Identities = 36/89 (40%), Positives = 54/89 (60%)
Frame = -2

Query: 459 K*RSKNWKRSEVLELIKVRMEMGSKFSMPXXXXXXXXXXXXXXXAQDIHRDGRQCREKWE 280
K RSKNW R+E L+LI++R EM +F+ + + RD ++CR+KWE
Sbjct: 28 KQRSKNWTRAETLKLIRLRAEMEPRFARSGRKSELWEEIAESLRRESVARDAQRCRDKWE 87

Query: 279 KLIAEYKEVAEGRRDQSESPFFMELNTFM 193
KL A YKEV +G+R++ + PFF EL+ +
Sbjct: 88 KLTASYKEVRDGQRNRQDFPFFDELDPLL 116


>tr|A9RUD2|A9RUD2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_161039 PE=4 SV=1
Length = 496

Score = 95.1 bits (235), Expect = 1e-18
Identities = 45/89 (50%), Positives = 59/89 (66%)
Frame = -2

Query: 459 K*RSKNWKRSEVLELIKVRMEMGSKFSMPXXXXXXXXXXXXXXXAQDIHRDGRQCREKWE 280
K RSKNWKR+EVL+ IK+R EM S+F+ Q I RDG+QCREKW+
Sbjct: 401 KRRSKNWKRTEVLQFIKLRGEMDSRFAHSTRRAALWDGLAERLLVQGIKRDGKQCREKWD 460

Query: 279 KLIAEYKEVAEGRRDQSESPFFMELNTFM 193
KL+AEYK+V +G+RDQ ESP++ EL +
Sbjct: 461 KLMAEYKDVTDGKRDQRESPYYSELTAIL 489



Score = 74.3 bits (181), Expect = 3e-12
Identities = 35/89 (39%), Positives = 54/89 (60%)
Frame = -2

Query: 459 K*RSKNWKRSEVLELIKVRMEMGSKFSMPXXXXXXXXXXXXXXXAQDIHRDGRQCREKWE 280
K RSKNW R E L+LI++R ++ +FS ++ RD +QCR+KWE
Sbjct: 129 KKRSKNWTRPESLQLIRLRTQLEPRFSKSGRKTELWDEIAEALHKKNFTRDAQQCRDKWE 188

Query: 279 KLIAEYKEVAEGRRDQSESPFFMELNTFM 193
KL A YKEV +G +D+ ++PF+ EL++ +
Sbjct: 189 KLTAGYKEVRDGIKDKEDNPFYDELHSLL 217


>tr|A9TGC8|A9TGC8_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_169928 PE=4 SV=1
Length = 627

Score = 83.6 bits (205), Expect = 5e-15
Identities = 41/78 (52%), Positives = 52/78 (66%)
Frame = -2

Query: 471 QGGLK*RSKNWKRSEVLELIKVRMEMGSKFSMPXXXXXXXXXXXXXXXAQDIHRDGRQCR 292
QG K RSKNWKR+EVL+LIK+R EM S+F+ Q I RDG+QCR
Sbjct: 415 QGAPKRRSKNWKRAEVLQLIKLRGEMDSRFAHSTRRAALWDELAERLLVQGIKRDGKQCR 474

Query: 291 EKWEKLIAEYKEVAEGRR 238
EKW+KL+AEYK+V +G+R
Sbjct: 475 EKWDKLMAEYKDVTDGKR 492



Score = 72.4 bits (176), Expect = 1e-11
Identities = 33/89 (37%), Positives = 54/89 (60%)
Frame = -2

Query: 459 K*RSKNWKRSEVLELIKVRMEMGSKFSMPXXXXXXXXXXXXXXXAQDIHRDGRQCREKWE 280
K RSKNW R E L+LI++R ++ +F+ ++ RD +QCR+KWE
Sbjct: 149 KKRSKNWTRPESLQLIRLRTQLEPRFAKSGRKTELWDEIAEALQKENFTRDAQQCRDKWE 208

Query: 279 KLIAEYKEVAEGRRDQSESPFFMELNTFM 193
KL A YKEV +G +D+ ++PF+ +L++ +
Sbjct: 209 KLTAGYKEVRDGIKDKEDNPFYDDLHSLL 237


>tr|A9RNY9|A9RNY9_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_22031 PE=4 SV=1
Length = 476

Score = 49.3 bits (116), Expect = 9e-05
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Frame = -2

Query: 477 DEQGGLK*RSKNWKRSEVLELIKVRMEMGSKFSMPXXXXXXXXXXXXXXXAQDIHRDGRQ 298
D+ + SK W + EVL LIK+R +M S+F +R+ ++
Sbjct: 371 DKDSPIDPNSKRWPKPEVLTLIKLRSDMESRFQEAGPKGPLWEEISQGMACLGYNRNQKR 430

Query: 297 CREKWEKLIAEYKEVAEGRRDQSES----PFFMELNTFMEEG 184
C+EKWE + +++ E + + E+ P+F +L +G
Sbjct: 431 CKEKWENINKYFRKTKESNKKRPENAKTCPYFHQLEVLYRQG 472



Score = 41.2 bits (95), Expect = 0.026
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = -2

Query: 474 EQGGLK*RSKNWKRSEVLELIKVRMEMGSKFSMPXXXXXXXXXXXXXXXAQDIHRDGRQC 295
E+ G + W R E L LIK+R +M + F +R ++C
Sbjct: 44 EEEGRSTGANRWPRQETLALIKIRSDMDANFRDSGLKGPLWEDVSKKLAELGYNRSAKKC 103

Query: 294 REKWEKLIAEYKEVAE---GRRDQSESPFFMEL 205
+EK+E + YK+ + GR+D FF +L
Sbjct: 104 KEKFENVHKYYKKTKDGRAGRQDGKNYRFFSQL 136


>tr|Q9FMV9|Q9FMV9_ARATH Genomic DNA, chromosome 5, P1 clone:MLE2
OS=Arabidopsis thaliana PE=4 SV=1
Length = 330

Score = 48.5 bits (114), Expect = 2e-04
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = -2

Query: 453 RSKNWKRSEVLELIKVRMEMGSKFSMPXXXXXXXXXXXXXXXAQDIHRDGRQCREKWEKL 274
R WK E+ ++I++R E+ S+F + A+ I+R QC+ W L
Sbjct: 236 RKNKWKPEEIKKVIRMRGELHSRFQVVKGRMALWEEISSNLSAEGINRSPGQCKSLWASL 295

Query: 273 IAEYKEVAEGRRDQSESPFFMELNTFMEE 187
I +Y+E R ++ P F ++N + E
Sbjct: 296 IQKYEESKADERSKTSWPHFEDMNNILSE 324


>tr|Q84W56|Q84W56_ARATH Putative uncharacterized protein At5g63420
OS=Arabidopsis thaliana GN=At5g63420 PE=2 SV=1
Length = 911

Score = 48.5 bits (114), Expect = 2e-04
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = -2

Query: 453 RSKNWKRSEVLELIKVRMEMGSKFSMPXXXXXXXXXXXXXXXAQDIHRDGRQCREKWEKL 274
R WK E+ ++I++R E+ S+F + A+ I+R QC+ W L
Sbjct: 817 RKNKWKPEEIKKVIRMRGELHSRFQVVKGRMALWEEISSNLSAEGINRSPGQCKSLWASL 876

Query: 273 IAEYKEVAEGRRDQSESPFFMELNTFMEE 187
I +Y+E R ++ P F ++N + E
Sbjct: 877 IQKYEESKADERSKTSWPHFEDMNNILSE 905


>tr|Q67YC1|Q67YC1_ARATH Putative uncharacterized protein At5g63420
OS=Arabidopsis thaliana GN=At5g63420 PE=2 SV=1
Length = 911

Score = 48.5 bits (114), Expect = 2e-04
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = -2

Query: 453 RSKNWKRSEVLELIKVRMEMGSKFSMPXXXXXXXXXXXXXXXAQDIHRDGRQCREKWEKL 274
R WK E+ ++I++R E+ S+F + A+ I+R QC+ W L
Sbjct: 817 RKNKWKPEEIKKVIRMRGELHSRFQVVKGRMALWEEISSNLSAEGINRSPGQCKSLWASL 876

Query: 273 IAEYKEVAEGRRDQSESPFFMELNTFMEE 187
I +Y+E R ++ P F ++N + E
Sbjct: 877 IQKYEESKADERSKTSWPHFEDMNNILSE 905


>tr|A9SJK2|A9SJK2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_130931 PE=4 SV=1
Length = 567

Score = 48.1 bits (113), Expect = 2e-04
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Frame = -2

Query: 477 DEQGGLK*RSKNWKRSEVLELIKVRMEMGSKFSMPXXXXXXXXXXXXXXXAQDIHRDGRQ 298
D+ + SK W + EVL LIK+R +M ++F +R+ ++
Sbjct: 369 DKDSPIDPNSKRWPKPEVLTLIKLRSDMETRFQEAGPKGPLWEEISQGMACLGYNRNQKR 428

Query: 297 CREKWEKLIAEYKEVAEGRRDQSES----PFFMELNTFMEEG 184
C+EKWE + +++ E + + E+ P+F +L +G
Sbjct: 429 CKEKWENINKYFRKTKESNKKRPENAKTCPYFHQLEVLYRQG 470



Score = 40.0 bits (92), Expect = 0.057
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
Frame = -2

Query: 474 EQGGLK*RSKNWKRSEVLELIKVRMEMGSKFSMPXXXXXXXXXXXXXXXAQDIHRDGRQC 295
E+ G W R E L LIK+R +M + F R ++C
Sbjct: 44 EEEGRSTGGNRWPRQETLALIKIRSDMDANFRDSGLKGPLWEDVSKKLAELGYSRSAKKC 103

Query: 294 REKWEKLIAEYKEVAE---GRRDQSESPFFMEL 205
+EK+E + YK+ + GR+D FF +L
Sbjct: 104 KEKFENVHKYYKKTKDGRAGRQDGKSYRFFSQL 136


>tr|A7PHF3|A7PHF3_VITVI Chromosome chr17 scaffold_16, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00017918001
PE=4 SV=1
Length = 880

Score = 45.8 bits (107), Expect = 0.001
Identities = 23/89 (25%), Positives = 40/89 (44%)
Frame = -2

Query: 453 RSKNWKRSEVLELIKVRMEMGSKFSMPXXXXXXXXXXXXXXXAQDIHRDGRQCREKWEKL 274
+ WK EV +LI +R E+ SKF + A I R QC+ W L
Sbjct: 785 KRNKWKPEEVKKLISMRGELHSKFQVVKRRMALWEEIATNLLADGIDRTPGQCKSLWTSL 844

Query: 273 IAEYKEVAEGRRDQSESPFFMELNTFMEE 187
+ +Y+E+ ++ + P F ++N + +
Sbjct: 845 VQKYQEIKGDKKSRKSWPHFEDMNEILSD 873


>tr|A5C3R9|A5C3R9_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_026006 PE=4 SV=1
Length = 1616

Score = 45.8 bits (107), Expect = 0.001
Identities = 23/89 (25%), Positives = 40/89 (44%)
Frame = -2

Query: 453 RSKNWKRSEVLELIKVRMEMGSKFSMPXXXXXXXXXXXXXXXAQDIHRDGRQCREKWEKL 274
+ WK EV +LI +R E+ SKF + A I R QC+ W L
Sbjct: 1521 KRNKWKPEEVKKLISMRGELHSKFQVVKRRMALWEEIATNLLADGIDRTPGQCKSLWTSL 1580

Query: 273 IAEYKEVAEGRRDQSESPFFMELNTFMEE 187
+ +Y+E+ ++ + P F ++N + +
Sbjct: 1581 VQKYQEIKGDKKSRKSWPHFEDMNEILSD 1609