BP919194 |
Clone id |
YMU001_000122_C11 |
Library |
YMU01 |
Length |
540 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000122_C11. |
Accession |
BP919194 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TTTCATGTGGCTCAAGCACACACTCGGAACGCTCATCCAATGATAAATTGTAAGCTCATC AAGTGCACACCAAAAGAATGATCACATTGTAGGTTTGATTTTAAGAGCAAAAAGTAGTAA GGATGTACAAAAGATCACCTGAAATAGAGCTCCTTTCAAGACAGGAGACTTTAATGTGTA GAAGCTTTGAGTTTGATTAGTCAAGAATACGGCCTGGTGCTGCGTATGCTTTAGGCACAT ACTCTTCGAGTCTTCTGTCTACCTCTACTGTTGTCCCTGCTTCTGCGCTGTCTTTTCTGC CGAGGTGGTCGTCTTGAGATTTTTTTCCTTGCAAGCCGCTGTTTCCGTACCTCTGGGTCT CCCCAGCCTCGTCCCCACTCTTGTGCCCTGCTGAGCCTGGACGGCTCCAGCAGGGCCTGG ATCATGTCTCCTTCTGGATGGACCCAAAAACTCACCGAGCCTTCTCTCCTTCGATCATCA AGGAACTTCTGACCATCAGCCGTGACTTCTGGGTTTCTGAGGTGTGGCACAATCAGCTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8BL06 |
Definition |
sp|Q8BL06|UBP54_MOUSE Inactive ubiquitin carboxyl-terminal hydrolase 54 OS=Mus musculus |
Align length |
109 |
Score (bit) |
33.1 |
E-value |
0.89 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PS27 |
Definition |
tr|A7PS27|A7PS27_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
63 |
Score (bit) |
52.4 |
E-value |
2.0e-05 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919194|Adiantum capillus-veneris mRNA, clone: YMU001_000122_C11. (540 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PS27|A7PS27_VITVI Chromosome chr14 scaffold_27, whole genom... 52 2e-05 tr|A9T1T4|A9T1T4_PHYPA Predicted protein (Fragment) OS=Physcomit... 52 3e-05 tr|Q5WN04|Q5WN04_ORYSJ Putative DNA helicase OS=Oryza sativa sub... 50 6e-05 tr|Q0DKP2|Q0DKP2_ORYSJ Os05g0150600 protein OS=Oryza sativa subs... 50 6e-05 tr|B8AY50|B8AY50_ORYSI Putative uncharacterized protein OS=Oryza... 50 6e-05 tr|A3B014|A3B014_ORYSJ Putative uncharacterized protein OS=Oryza... 50 6e-05 tr|Q9FT69|Q9FT69_ARATH DNA Helicase (Putative uncharacterized pr... 50 8e-05 tr|A7SQ81|A7SQ81_NEMVE Predicted protein OS=Nematostella vectens... 36 1.5 tr|Q4CVR4|Q4CVR4_TRYCR Nucleosome assembly protein-like protein,... 34 4.3 tr|B4PU13|B4PU13_DROYA GE10089 OS=Drosophila yakuba GN=GE10089 P... 34 4.4 tr|B3K261|B3K261_9DELT ATP-dependent metalloprotease FtsH OS=Geo... 34 5.6 tr|B6PTE4|B6PTE4_BRAFL Putative uncharacterized protein OS=Branc... 34 5.6 tr|Q4P4G6|Q4P4G6_USTMA Putative uncharacterized protein OS=Ustil... 34 5.6 tr|A6G5Y2|A6G5Y2_9DELT Putative uncharacterized protein OS=Plesi... 33 7.3 tr|Q093G7|Q093G7_STIAU Putative uncharacterized protein OS=Stigm... 33 7.4 tr|B5EHB1|B5EHB1_GEOBB ATP-dependent metalloprotease FtsH OS=Geo... 33 9.5
>tr|A7PS27|A7PS27_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022732001 PE=4 SV=1 Length = 745
Score = 52.4 bits (124), Expect = 2e-05 Identities = 24/63 (38%), Positives = 37/63 (58%) Frame = -2
Query: 521 LRNPEVTADGQKFLDDRRREGSVSFWVHPEGDMIQALLEPSRLSRAQEWGRGWGDPEVRK 342 ++ P+ T G +FL + +F V+P+ DM+ + P S EWG+GW DPE+R+ Sbjct: 649 IKFPKPTKLGLEFLQSTTEQ---TFDVYPQADMLLSTRNPKSYSTFSEWGKGWADPEIRR 705
Query: 341 QRL 333 QRL Sbjct: 706 QRL 708
>tr|A9T1T4|A9T1T4_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_10706 PE=4 SV=1 Length = 711
Score = 51.6 bits (122), Expect = 3e-05 Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 7/77 (9%) Frame = -2
Query: 539 KLIVPHLRNPEVTADGQKFLDDRR----REGSVSFWVHPEGDMIQALLEPSR---LSRAQ 381 KL+VP ++ P +T G + L + V+ EGDMIQA P ++ Sbjct: 611 KLVVPTIKYPLLTPKGLELLRTPNITIASQHVHRLLVYLEGDMIQASKMPRNHRTSEESR 670
Query: 380 EWGRGWGDPEVRKQRLA 330 EWGRGW DPE+R+QRL+ Sbjct: 671 EWGRGWADPEIRRQRLS 687
>tr|Q5WN04|Q5WN04_ORYSJ Putative DNA helicase OS=Oryza sativa subsp. japonica GN=P0001A07.5 PE=4 SV=1 Length = 844
Score = 50.4 bits (119), Expect = 6e-05 Identities = 24/64 (37%), Positives = 38/64 (59%) Frame = -2
Query: 521 LRNPEVTADGQKFLDDRRREGSVSFWVHPEGDMIQALLEPSRLSRAQEWGRGWGDPEVRK 342 ++ PEVT G FL + E + +++ M+ + +P +S + EWGRGW DP +R+ Sbjct: 747 IQYPEVTEAGLNFLSMQSEEEGLYEYLNAA--MLLVMNDPKPISTSSEWGRGWADPAIRR 804
Query: 341 QRLA 330 QRLA Sbjct: 805 QRLA 808
>tr|Q0DKP2|Q0DKP2_ORYSJ Os05g0150600 protein OS=Oryza sativa subsp. japonica GN=Os05g0150600 PE=4 SV=1 Length = 872
Score = 50.4 bits (119), Expect = 6e-05 Identities = 24/64 (37%), Positives = 38/64 (59%) Frame = -2
Query: 521 LRNPEVTADGQKFLDDRRREGSVSFWVHPEGDMIQALLEPSRLSRAQEWGRGWGDPEVRK 342 ++ PEVT G FL + E + +++ M+ + +P +S + EWGRGW DP +R+ Sbjct: 775 IQYPEVTEAGLNFLSMQSEEEGLYEYLNAA--MLLVMNDPKPISTSSEWGRGWADPAIRR 832
Query: 341 QRLA 330 QRLA Sbjct: 833 QRLA 836
>tr|B8AY50|B8AY50_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18479 PE=4 SV=1 Length = 826
Score = 50.4 bits (119), Expect = 6e-05 Identities = 24/64 (37%), Positives = 38/64 (59%) Frame = -2
Query: 521 LRNPEVTADGQKFLDDRRREGSVSFWVHPEGDMIQALLEPSRLSRAQEWGRGWGDPEVRK 342 ++ PEVT G FL + E + +++ M+ + +P +S + EWGRGW DP +R+ Sbjct: 729 IQYPEVTEAGLNFLSMQSEEEGLYEYLNAA--MLLVMNDPKPISTSSEWGRGWADPAIRR 786
Query: 341 QRLA 330 QRLA Sbjct: 787 QRLA 790
>tr|A3B014|A3B014_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_016386 PE=4 SV=1 Length = 848
Score = 50.4 bits (119), Expect = 6e-05 Identities = 24/64 (37%), Positives = 38/64 (59%) Frame = -2
Query: 521 LRNPEVTADGQKFLDDRRREGSVSFWVHPEGDMIQALLEPSRLSRAQEWGRGWGDPEVRK 342 ++ PEVT G FL + E + +++ M+ + +P +S + EWGRGW DP +R+ Sbjct: 751 IQYPEVTEAGLNFLSMQSEEEGLYEYLNAA--MLLVMNDPKPISTSSEWGRGWADPAIRR 808
Query: 341 QRLA 330 QRLA Sbjct: 809 QRLA 812
>tr|Q9FT69|Q9FT69_ARATH DNA Helicase (Putative uncharacterized protein At5g27680) (Fragment) OS=Arabidopsis thaliana GN=recQsim PE=2 SV=1 Length = 858
Score = 50.1 bits (118), Expect = 8e-05 Identities = 24/57 (42%), Positives = 34/57 (59%) Frame = -2
Query: 503 TADGQKFLDDRRREGSVSFWVHPEGDMIQALLEPSRLSRAQEWGRGWGDPEVRKQRL 333 T G+K LD + +V+PE DM+ +L + S EWG+GW DPE+R+QRL Sbjct: 772 TEKGKKQLDF---QDDKPLYVYPEADMLLSLKQDRTYSGFSEWGKGWADPEIRRQRL 825
>tr|A7SQ81|A7SQ81_NEMVE Predicted protein OS=Nematostella vectensis GN=v1g246718 PE=4 SV=1 Length = 1811
Score = 35.8 bits (81), Expect = 1.5 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%) Frame = +1
Query: 352 SGSPQPRPHSCALLSLDG--SSRAWIMSPSGWTQKLTEPSLLRSSRNF*PSAVTSGFLR 522 +GSP RP S +S+DG +S + SPS T+ L +P+ LR + VTS F++ Sbjct: 542 NGSPTERPSSDKKVSIDGFSTSHTSLKSPSPVTEVLMDPTGLRETTGITTPTVTSTFVK 600
>tr|Q4CVR4|Q4CVR4_TRYCR Nucleosome assembly protein-like protein, putative OS=Trypanosoma cruzi GN=Tc00.1047053505983.20 PE=3 SV=1 Length = 455
Score = 34.3 bits (77), Expect = 4.3 Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%) Frame = -3
Query: 415 PCWSRPGSAGHKSGDEAGETQRY-GNSGLQGKKSQDDHLGRKDSAEAGTTVEVDRRL-EE 242 PC D+ G+ ++ G++G +G K DD ++ AEA +EV + L EE Sbjct: 305 PCRDEDDDEDDDHDDDNGKDGKHSGDAGKKGDKEDDDDDDDEEEAEAELHIEVGQLLMEE 364
Query: 241 YVPK-AYAAPGRILD*SNSKLLHIKV 167 VPK A+ G+ +D ++ LH ++ Sbjct: 365 IVPKAAFFYTGKSVD-QTAQALHNQI 389
>tr|B4PU13|B4PU13_DROYA GE10089 OS=Drosophila yakuba GN=GE10089 PE=4 SV=1 Length = 1259
Score = 34.3 bits (77), Expect = 4.4 Identities = 20/61 (32%), Positives = 31/61 (50%) Frame = -1
Query: 474 SKERRLGEFLGPSRRRHDPGPAGAVQAQQGTRVGTRLGRPRGTETAACKEKNLKTTTSAE 295 S+ R E SRR H P P + G+ V T +GRPR ++ A + NL +T++ Sbjct: 488 SRHRTYAEQESTSRRHHMPFPPSSTPTSNGSCVITYVGRPRESQPAV--DLNLPSTSTGR 545
Query: 294 K 292 + Sbjct: 546 R 546
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