BP919199
Clone id YMU001_000122_D04
Library
Length 544
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000122_D04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ATCTGGAGTAAGAAAACTTGTTCCTCCTAAAACAATGTCAGCATCATCTTCCATCTTGTA
AATTGCTTGTGCTTCTTTAGCTTCACAAATCTCTACACCGATAATACCTCCAATAACAAA
CACCATAATAAGTTTGTTGTCACTGAGCTTTGGTTTTACCTGGCTGAGTCCAAACCTTCC
AAGACCACTCTTCAGTATCCGGCCCACAAAGGAAGCATGATGCTCCATCCCTGGGTATTT
CAGGCTTTTGCAAAAAGCAACATAAGGCACTTTAAAGATTAAGCTTCTCCGTGTAGATGA
AGATCCACCAAAGCCATCATAATCGTCAAAAACTGACGACTTATTATCAGCCTGTAAAAA
TCGTCTTGCTTCTGAGACTCTGTGAAGCCTTCCAAAAACGGCTTCAACCCTATCCCTTAC
TTGCAATCTGAGTTGGGTTCTTTGGTAATCTCCGTCATATGCTTCGCCATTGCCCATATC
AATTTCTTCCTCATCATCCCACGCTTCCCATCCTTCATTACTGAAATCAAGCTGGAGTTC
TTCG
■■Homology search results ■■ -
sp_hit_id Q22472
Definition sp|Q22472|RIC3_CAEEL Resistance to inhibitors of cholinesterase protein 3 OS=Caenorhabditis elegans
Align length 46
Score (bit) 30.4
E-value 5.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919199|Adiantum capillus-veneris mRNA, clone:
YMU001_000122_D04.
(521 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q22472|RIC3_CAEEL Resistance to inhibitors of cholinesterase ... 30 5.3
sp|Q9LZB8|ATH12_ARATH ABC2 homolog 12 OS=Arabidopsis thaliana GN... 30 5.3
sp|Q8I3Z1|MLRR1_PLAF7 MATH and LRR domain-containing protein PFE... 30 6.9
sp|B4LNA1|EIF3C_DROVI Eukaryotic translation initiation factor 3... 30 9.0

>sp|Q22472|RIC3_CAEEL Resistance to inhibitors of cholinesterase
protein 3 OS=Caenorhabditis elegans GN=ric-3 PE=1 SV=2
Length = 378

Score = 30.4 bits (67), Expect = 5.3
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -3

Query: 330 FDDYDGFGGSSSTRRSLIFKVPYVAFCKSLKYPGMEHH--ASFVGR 199
+DDYD GG S + L+F V + C ++ YP + H F+GR
Sbjct: 28 YDDYDEEGGISGWKLGLVFGV--IVVCFAMLYPTLFHPMLMGFLGR 71


>sp|Q9LZB8|ATH12_ARATH ABC2 homolog 12 OS=Arabidopsis thaliana
GN=ATH12 PE=2 SV=1
Length = 634

Score = 30.4 bits (67), Expect = 5.3
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1

Query: 415 PYLQSELGSLVISVICFAIAHINFFLIIPRFPSF 516
PYLQSE ++++ +C ++ ++ I+PR SF
Sbjct: 67 PYLQSESKTVLLGWLCSCVSVVSLSQIVPRLGSF 100


>sp|Q8I3Z1|MLRR1_PLAF7 MATH and LRR domain-containing protein PFE0570w
OS=Plasmodium falciparum (isolate 3D7) GN=PFE0570w PE=2
SV=1
Length = 10061

Score = 30.0 bits (66), Expect = 6.9
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Frame = +1

Query: 7 SKKTCSS*NNVSIIFHLVNCLCFFSFTNLY-TDNTSNNKHHNKFVVTEL-----WFYLAE 168
SKK CS+ N++ I H + N T+N +NN ++N +VV ++YL
Sbjct: 8934 SKKNCSNTNHIMSINHS-------NMNNTKNTNNHNNNNNNNNYVVNHTTHSTSFYYLHN 8986

Query: 169 SKPS 180
KPS
Sbjct: 8987 EKPS 8990


>sp|B4LNA1|EIF3C_DROVI Eukaryotic translation initiation factor 3
subunit C OS=Drosophila virilis GN=eIF3-S8 PE=3 SV=1
Length = 913

Score = 29.6 bits (65), Expect = 9.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3

Query: 507 EAWDDEEEIDMGNGEAYDGDYQR 439
EA D E ++D G GEA+D D +R
Sbjct: 159 EAPDQESDVDEGEGEAHDSDAER 181


tr_hit_id B8LLT8
Definition tr|B8LLT8|B8LLT8_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 173
Score (bit) 112.0
E-value 1.0e-23
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919199|Adiantum capillus-veneris mRNA, clone:
YMU001_000122_D04.
(521 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8LLT8|B8LLT8_PICSI Putative uncharacterized protein OS=Picea... 112 1e-23
tr|A9PJ66|A9PJ66_POPJC Putative uncharacterized protein OS=Popul... 106 8e-22
tr|Q9SJI6|Q9SJI6_ARATH Putative uncharacterized protein At2g4270... 105 2e-21
tr|A9TCH1|A9TCH1_PHYPA Predicted protein (Fragment) OS=Physcomit... 97 6e-19
tr|Q2RA23|Q2RA23_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 91 3e-17
tr|A7PJI5|A7PJI5_VITVI Chromosome chr12 scaffold_18, whole genom... 89 2e-16
tr|Q53JG6|Q53JG6_ORYSJ Putative uncharacterized protein OS=Oryza... 82 2e-14
tr|B8BJB1|B8BJB1_ORYSI Putative uncharacterized protein OS=Oryza... 82 2e-14
tr|Q2K6N3|Q2K6N3_RHIEC Probable SAM-dependent methyltransferase ... 35 1.7
tr|B4I1P4|B4I1P4_DROSE GM17973 OS=Drosophila sechellia GN=GM1797... 34 5.0

>tr|B8LLT8|B8LLT8_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 886

Score = 112 bits (280), Expect = 1e-23
Identities = 67/173 (38%), Positives = 101/173 (58%)
Frame = -3

Query: 519 NEGWEAWDDEEEIDMGNGEAYDGDYQRTQLRLQVRDRVEAVFGRLHRVSEARRFLQADNK 340
++ W +W+DEE G+ + +Y QL+L++RDR++ VF LH+VS+ARR L ++
Sbjct: 710 DDQWGSWEDEE----AEGDR-EQEYGELQLKLELRDRMDNVFKVLHKVSDARRALLFKDR 764

Query: 339 SSVFDDYDGFGGSSSTRRSLIFKVPYVAFCKSLKYPGMEHHASFVGRILKSGLGRFGLSQ 160
S ++ +S T R LI K+ + F K PG+E+H+S +GR+ KSG GRFGL Q
Sbjct: 765 QSTLEEISN--ATSYTNRGLISKILSMVFAKC-DIPGLEYHSSAMGRLFKSGFGRFGLGQ 821

Query: 159 VKPKLSDNKLXXXXXXXXXXXXXICEAKEAQAIYKMEDDADIVLGGTSFLTPD 1
KP+L D L + EA+EAQA D +++LGGT+ LTP+
Sbjct: 822 AKPRLGDQSLLFVFLVGGINALEVREAQEAQA-SAGADGVELLLGGTTILTPN 873


>tr|A9PJ66|A9PJ66_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 517

Score = 106 bits (264), Expect = 8e-22
Identities = 63/173 (36%), Positives = 94/173 (54%)
Frame = -3

Query: 519 NEGWEAWDDEEEIDMGNGEAYDGDYQRTQLRLQVRDRVEAVFGRLHRVSEARRFLQADNK 340
++ W W DEEE D N + Y QL+L++ DRV+ +F LH++S +R + +
Sbjct: 338 DDQWGKWGDEEEDDDKNDKKQA--YSDMQLKLELLDRVDNLFKSLHKLSTVKRNVSL--R 393

Query: 339 SSVFDDYDGFGGSSSTRRSLIFKVPYVAFCKSLKYPGMEHHASFVGRILKSGLGRFGLSQ 160
F F G S + RSLI+K+ K+ PG+E+H++ VGR+ KSG GRFGL Q
Sbjct: 394 EGTFSSESNFTGDSDSNRSLIYKLLTRVLRKN-DVPGLEYHSTTVGRLFKSGFGRFGLGQ 452

Query: 159 VKPKLSDNKLXXXXXXXXXXXXXICEAKEAQAIYKMEDDADIVLGGTSFLTPD 1
KP L+D + + E +EA + D +++LGGT+FLTPD
Sbjct: 453 TKPSLADQNIIMVFVVGGINAAEVREVQEALS-ESGRPDVELILGGTTFLTPD 504


>tr|Q9SJI6|Q9SJI6_ARATH Putative uncharacterized protein At2g42700
OS=Arabidopsis thaliana GN=At2g42700 PE=2 SV=1
Length = 788

Score = 105 bits (261), Expect = 2e-21
Identities = 62/173 (35%), Positives = 96/173 (55%)
Frame = -3

Query: 519 NEGWEAWDDEEEIDMGNGEAYDGDYQRTQLRLQVRDRVEAVFGRLHRVSEARRFLQADNK 340
++ W W DEEE ++ N +A D Y QL+L +RDRV+++F LH++S R +
Sbjct: 607 DDPWGKWGDEEEEEVDNSKA-DESYDDMQLKLDLRDRVDSLFRFLHKLSSLRTRNLPLRE 665

Query: 339 SSVFDDYDGFGGSSSTRRSLIFKVPYVAFCKSLKYPGMEHHASFVGRILKSGLGRFGLSQ 160
S+ + F G S + L++++ K + PG+E+H+S VGR +KSG GRFGL Q
Sbjct: 666 GSLASE-SSFPGEPSGNKGLVYRLITKVLSKQ-EIPGLEYHSSTVGRFIKSGFGRFGLGQ 723

Query: 159 VKPKLSDNKLXXXXXXXXXXXXXICEAKEAQAIYKMEDDADIVLGGTSFLTPD 1
KP L+D + + EA+EA + D ++V+GGT+ LTPD
Sbjct: 724 AKPSLADQSVILVFVIGGINGIEVLEAQEAVS-ESGRPDINLVIGGTTLLTPD 775


>tr|A9TCH1|A9TCH1_PHYPA Predicted protein (Fragment) OS=Physcomitrella
patens subsp. patens GN=PHYPADRAFT_143481 PE=4 SV=1
Length = 757

Score = 96.7 bits (239), Expect = 6e-19
Identities = 65/175 (37%), Positives = 92/175 (52%), Gaps = 3/175 (1%)
Frame = -3

Query: 519 NEGWEAWDD-EEEIDMGNGEAYDGDYQRTQLRLQVRDRVEAVFGRLHRVSEARRFLQADN 343
++GW W+ EE+ID DGDY TQL+L++RDR++ V LH VS AR L
Sbjct: 586 DDGWGEWEGLEEDID-------DGDYGETQLKLEIRDRLQEVMSVLHCVSRARARLPVAL 638

Query: 342 KSSVFDDYDGFGGSSSTRRSLIFKVPYVAFCKSLKYPGMEHHASFVGRILKSGLGRFGLS 163
+S+ + L+ +V + F K+ PG+ HH+S VG KSGLGRFGL
Sbjct: 639 RSTEEQVFP---------TGLLQQVFSLIFAKA-DVPGLHHHSSSVGNFFKSGLGRFGLG 688

Query: 162 Q--VKPKLSDNKLXXXXXXXXXXXXXICEAKEAQAIYKMEDDADIVLGGTSFLTP 4
Q +PKL D + I E KEAQ + + ++++GGT+FLTP
Sbjct: 689 QRLQQPKLGDYRTIIVFVVGGISGSEIREIKEAQMGHPGSESVEVLMGGTTFLTP 743


>tr|Q2RA23|Q2RA23_ORYSJ Expressed protein OS=Oryza sativa subsp.
japonica GN=Os11g0169100 PE=4 SV=1
Length = 862

Score = 90.9 bits (224), Expect = 3e-17
Identities = 60/174 (34%), Positives = 90/174 (51%), Gaps = 1/174 (0%)
Frame = -3

Query: 519 NEGWEAW-DDEEEIDMGNGEAYDGDYQRTQLRLQVRDRVEAVFGRLHRVSEARRFLQADN 343
++ W++W DD++ D EAY GD Q L+L+VRDRV+ +F H +S R L+
Sbjct: 684 DDQWDSWGDDDDNTDDQKDEAY-GDMQ---LKLEVRDRVDQLFKFFHNLSSMR--LRNQT 737

Query: 342 KSSVFDDYDGFGGSSSTRRSLIFKVPYVAFCKSLKYPGMEHHASFVGRILKSGLGRFGLS 163
F +R+ L++K+ +A PG+E+H+S VGR+ KSGLGRFGL
Sbjct: 738 LGEGLAALSRFETDIYSRKGLLYKL-LLAVLARYDIPGLEYHSSAVGRLFKSGLGRFGLG 796

Query: 162 QVKPKLSDNKLXXXXXXXXXXXXXICEAKEAQAIYKMEDDADIVLGGTSFLTPD 1
Q KP D + + E +A + D +++LGGT+ LTPD
Sbjct: 797 QSKPSFGDQSILIVFVVGGINALEVREVMKAIS-DSSRPDVELILGGTTLLTPD 849


>tr|A7PJI5|A7PJI5_VITVI Chromosome chr12 scaffold_18, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00018753001
PE=4 SV=1
Length = 817

Score = 88.6 bits (218), Expect = 2e-16
Identities = 54/149 (36%), Positives = 84/149 (56%)
Frame = -3

Query: 447 YQRTQLRLQVRDRVEAVFGRLHRVSEARRFLQADNKSSVFDDYDGFGGSSSTRRSLIFKV 268
Y QL+L++RDRV+ +F LH++S +R + + D D F G ST + L++K+
Sbjct: 659 YGDMQLKLELRDRVDNLFKVLHKLSSLKRRNIPLREGPLALDND-FSGDPSTSKGLLYKL 717

Query: 267 PYVAFCKSLKYPGMEHHASFVGRILKSGLGRFGLSQVKPKLSDNKLXXXXXXXXXXXXXI 88
K + PG+++H+S VGR+ KSG GRFGL Q KP L+D + +
Sbjct: 718 LTRVLGK-YEVPGLDYHSSTVGRLFKSGFGRFGLGQAKPSLADQNVILVFVIGGINGLEV 776

Query: 87 CEAKEAQAIYKMEDDADIVLGGTSFLTPD 1
EA+EA + D ++++GGT+ LTPD
Sbjct: 777 REAQEALS-ESGRPDIELIIGGTTLLTPD 804


>tr|Q53JG6|Q53JG6_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=LOC_Os11g06810 PE=4 SV=1
Length = 958

Score = 82.0 bits (201), Expect = 2e-14
Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 23/196 (11%)
Frame = -3

Query: 519 NEGWEAW-DDEEEIDMGNGEAYDGDYQRTQLRLQVRDRVEAVFGRLHRVSEARRFLQADN 343
++ W++W DD++ D EAY GD Q L+L+VRDRV+ +F H +S R L+
Sbjct: 684 DDQWDSWGDDDDNTDDQKDEAY-GDMQ---LKLEVRDRVDQLFKFFHNLSSMR--LRNQT 737

Query: 342 KSSVFDDYDGFGGSSSTRRSLIFKVPYVAFCKSLKYPGMEHHASFVGRILKSGLGRFGLS 163
F +R+ L++K+ +A PG+E+H+S VGR+ KSGLGRFGL
Sbjct: 738 LGEGLAALSRFETDIYSRKGLLYKL-LLAVLARYDIPGLEYHSSAVGRLFKSGLGRFGLG 796

Query: 162 QVKPKLSDNKLXXXXXXXXXXXXXICEAKEA-----------QAIYKMED---------- 46
Q KP D + C A + Y++ +
Sbjct: 797 QSKPSFGDQSI-LIVFVVGGINALECTGSVALSEPSVGTRFLSSKYQVREVMKAISDSSR 855

Query: 45 -DADIVLGGTSFLTPD 1
D +++LGGT+ LTPD
Sbjct: 856 PDVELILGGTTLLTPD 871


>tr|B8BJB1|B8BJB1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_35262 PE=4 SV=1
Length = 884

Score = 82.0 bits (201), Expect = 2e-14
Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 23/196 (11%)
Frame = -3

Query: 519 NEGWEAW-DDEEEIDMGNGEAYDGDYQRTQLRLQVRDRVEAVFGRLHRVSEARRFLQADN 343
++ W++W DD++ D EAY GD Q L+L+VRDRV+ +F H +S R L+
Sbjct: 684 DDQWDSWGDDDDNTDDQKDEAY-GDMQ---LKLEVRDRVDQLFKFFHNLSSMR--LRNQT 737

Query: 342 KSSVFDDYDGFGGSSSTRRSLIFKVPYVAFCKSLKYPGMEHHASFVGRILKSGLGRFGLS 163
F +R+ L++K+ +A PG+E+H+S VGR+ KSGLGRFGL
Sbjct: 738 LGEGLAALSRFETDIYSRKGLLYKL-LLAVLARYDIPGLEYHSSAVGRLFKSGLGRFGLG 796

Query: 162 QVKPKLSDNKLXXXXXXXXXXXXXICEAKEA-----------QAIYKMED---------- 46
Q KP D + C A + Y++ +
Sbjct: 797 QSKPSFGDQSI-LIVFVVGGINALECTGSVALSEPSVGTRFLSSKYQVREVMKAISDSSR 855

Query: 45 -DADIVLGGTSFLTPD 1
D +++LGGT+ LTPD
Sbjct: 856 PDVELILGGTTLLTPD 871


>tr|Q2K6N3|Q2K6N3_RHIEC Probable SAM-dependent methyltransferase
protein OS=Rhizobium etli (strain CFN 42 / ATCC 51251)
GN=RHE_CH02733 PE=4 SV=1
Length = 195

Score = 35.4 bits (80), Expect = 1.7
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = -3

Query: 480 DMGNGEAYDGDYQRTQLRLQVRDRVEAVFGRLHRVSEARRFLQADNKSSVFDDYDGFG 307
D+ A+DG + L R + +F R+HR L A KS + +DGFG
Sbjct: 91 DLNAEAAFDGVWAEASLLHVARSTLPEIFARIHRALRTGGILHASFKSGEAEGHDGFG 148


>tr|B4I1P4|B4I1P4_DROSE GM17973 OS=Drosophila sechellia GN=GM17973
PE=4 SV=1
Length = 266

Score = 33.9 bits (76), Expect = 5.0
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -3

Query: 414 DRVEAVFGRLHRVSEARRFLQADNKSSVFDDYDGFGGS-SSTRRSLIFKVPYVAFCKS 244
D + VFGR + EA F K Y+G G SSTR +FKV Y+ F K+
Sbjct: 56 DSLRTVFGRAGSI-EAVEFAAKPGKEETIKWYEGTGEPFSSTRPPFVFKVAYIVFEKN 112