BP919212 |
Clone id |
YMU001_000122_E05 |
Library |
YMU01 |
Length |
508 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000122_E05. |
Accession |
BP919212 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ACTGGAAGAATTCGCGGCCGGGCATTAGCAGCATCCAGATCATGCAAAGTGACATCCTGT ACGATTTCTTTCTTCTTGTGTACATCTCCCTTTGGAAGCGGGACATACTCCTCTGCCTCC AAATCAAACTCTGTGGCAAAGGCGTCACTTCGACTAACCCTCTTTACAGCACCACTATTA GCTTCAATGTAGATCACATCTCCTACTGTCACCTTCTCCTTGATCAAAGCATCATAAATA GTCGGGTCAAGCTTTAGCTGCTTTGTACCCTTCACAGTTTTCATCCCAATGATGACATGA CTGATTGTCTTTCCATAGCCACCTGTTGCGTTCTCTGTCTCTTCTGGTGTCAACTCTGTA ACTTCACCCTCATAGACTTCTTTATTCTCCTTGATGCGGAGACCAATTGCACGTCGGAAA TTCTCCATTAACACTTCAGTCTTCTTTACCTCTGAGGAATAAACTTCTGAGCCCACCATA GGACAAAAAGGTACCTTGCTTCCTAGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8AWW7 |
Definition |
sp|Q8AWW7|RUVB1_DANRE RuvB-like 1 OS=Danio rerio |
Align length |
162 |
Score (bit) |
284.0 |
E-value |
1.0e-76 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RE67 |
Definition |
tr|A9RE67|A9RE67_PHYPA DNA helicase, TBP-interacting protein OS=Physcomitrella patens subsp. patens |
Align length |
162 |
Score (bit) |
305.0 |
E-value |
7.0e-82 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919212|Adiantum capillus-veneris mRNA, clone: YMU001_000122_E05. (488 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RE67|A9RE67_PHYPA DNA helicase, TBP-interacting protein OS=... 305 7e-82 tr|Q9M3Z6|Q9M3Z6_CICAR Putative Ruv DNA-helicase OS=Cicer arieti... 304 1e-81 tr|Q6ZLD7|Q6ZLD7_ORYSJ Putative RuvB-like protein 1,49-kDa TATA ... 301 8e-81 tr|Q0D878|Q0D878_ORYSJ Os07g0178900 protein OS=Oryza sativa subs... 301 8e-81 tr|B8B7Q1|B8B7Q1_ORYSI Putative uncharacterized protein OS=Oryza... 301 8e-81 tr|B7FAF4|B7FAF4_ORYSJ cDNA, clone: J100068H15, full insert sequ... 301 8e-81 tr|A3BH55|A3BH55_ORYSJ Putative uncharacterized protein OS=Oryza... 301 8e-81 tr|Q5QMH1|Q5QMH1_ORYSJ cDNA clone:001-124-H05, full insert seque... 298 1e-79 tr|A2WWS5|A2WWS5_ORYSI Putative uncharacterized protein OS=Oryza... 298 1e-79 tr|A7NZI9|A7NZI9_VITVI Chromosome chr6 scaffold_3, whole genome ... 296 3e-79 tr|Q9FMR9|Q9FMR9_ARATH Ruv DNA-helicase-like protein OS=Arabidop... 296 5e-79 tr|B4FRM0|B4FRM0_MAIZE Putative uncharacterized protein OS=Zea m... 294 2e-78 tr|B4F9I2|B4F9I2_MAIZE Putative uncharacterized protein OS=Zea m... 291 1e-77 tr|A1YQY4|A1YQY4_VOLCA Pontin OS=Volvox carteri f. nagariensis G... 291 1e-77 tr|B7PYR8|B7PYR8_IXOSC Putative uncharacterized protein OS=Ixode... 288 9e-77 tr|B6ND83|B6ND83_BRAFL Putative uncharacterized protein OS=Branc... 287 2e-76 tr|A8J4W8|A8J4W8_CHLRE Predicted protein OS=Chlamydomonas reinha... 287 2e-76 tr|B3S640|B3S640_TRIAD Putative uncharacterized protein OS=Trich... 287 2e-76 tr|Q6TGU6|Q6TGU6_DANRE RuvB-like 1 OS=Danio rerio GN=ruvbl1 PE=2... 286 5e-76 tr|Q6IQT8|Q6IQT8_DANRE RuvB-like 1 (E. coli) OS=Danio rerio GN=r... 286 5e-76 tr|B6K6M0|B6K6M0_SCHJP AAA family ATPase Rvb1 OS=Schizosaccharom... 285 1e-75 tr|A7S760|A7S760_NEMVE Predicted protein OS=Nematostella vectens... 284 1e-75 tr|Q4T9C9|Q4T9C9_TETNG Chromosome undetermined SCAF7598, whole g... 283 2e-75 tr|A9UPH5|A9UPH5_MONBE Predicted protein OS=Monosiga brevicollis... 282 5e-75 tr|Q6GR29|Q6GR29_XENLA Ruvbl1 protein OS=Xenopus laevis GN=ruvbl... 282 7e-75 tr|A4RWN4|A4RWN4_OSTLU Predicted protein OS=Ostreococcus lucimar... 282 7e-75 tr|Q5ZIC4|Q5ZIC4_CHICK Putative uncharacterized protein OS=Gallu... 281 9e-75 tr|B5X3S2|B5X3S2_SALSA RuvB-like 1 OS=Salmo salar GN=RUVB1 PE=2 ... 281 9e-75 tr|Q3U1C2|Q3U1C2_MOUSE Putative uncharacterized protein OS=Mus m... 281 9e-75 tr|A7MBG8|A7MBG8_BOVIN RUVBL1 protein OS=Bos taurus GN=RUVBL1 PE... 281 9e-75
>tr|A9RE67|A9RE67_PHYPA DNA helicase, TBP-interacting protein OS=Physcomitrella patens subsp. patens GN=RUVBL1501 PE=4 SV=1 Length = 456
Score = 305 bits (781), Expect = 7e-82 Identities = 152/162 (93%), Positives = 159/162 (98%) Frame = -3
Query: 486 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELTPEETENA 307 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTEL+PEETE+ Sbjct: 87 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELSPEETEST 146
Query: 306 TGGYGKTISHVIIGMKTVKGTKQLKLDPTIYDALIKEKVTVGDVIYIEANSGAVKRVSRS 127 TGGYGK+ISHV+IG+KTVKGTKQLKLDPTIYDAL+KEKV VGDVIYIEANSGAVKRV RS Sbjct: 147 TGGYGKSISHVVIGLKTVKGTKQLKLDPTIYDALMKEKVLVGDVIYIEANSGAVKRVGRS 206
Query: 126 DAFATEFDLEAEEYVPLPKGDVHKKKEIVQDVTLHDLDAANA 1 DAFATEFDLEAEEYVPLPKG+VHKKKEIVQDVTLHDLDAANA Sbjct: 207 DAFATEFDLEAEEYVPLPKGEVHKKKEIVQDVTLHDLDAANA 248
>tr|Q9M3Z6|Q9M3Z6_CICAR Putative Ruv DNA-helicase OS=Cicer arietinum PE=2 SV=1 Length = 458
Score = 304 bits (779), Expect = 1e-81 Identities = 152/162 (93%), Positives = 159/162 (98%) Frame = -3
Query: 486 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELTPEETENA 307 LG+KVPFCPMVGSEVYS+EVKKTEVLMENFRRAIGLRIKENKEVYEGEVTEL+PEETE+ Sbjct: 90 LGTKVPFCPMVGSEVYSTEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELSPEETESL 149
Query: 306 TGGYGKTISHVIIGMKTVKGTKQLKLDPTIYDALIKEKVTVGDVIYIEANSGAVKRVSRS 127 TGGYGK+ISHVIIG+KTVKGTKQLKLDPTIYDALIKEKV VGDVIYIEANSGAVKRV RS Sbjct: 150 TGGYGKSISHVIIGLKTVKGTKQLKLDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRS 209
Query: 126 DAFATEFDLEAEEYVPLPKGDVHKKKEIVQDVTLHDLDAANA 1 DAFATEFDLEAEEYVPLPKG+VHKKKEIVQDVTLHDLDAANA Sbjct: 210 DAFATEFDLEAEEYVPLPKGEVHKKKEIVQDVTLHDLDAANA 251
>tr|Q6ZLD7|Q6ZLD7_ORYSJ Putative RuvB-like protein 1,49-kDa TATA box-binding protein-interacting protein OS=Oryza sativa subsp. japonica GN=OJ1014_E09.2 PE=4 SV=1 Length = 470
Score = 301 bits (772), Expect = 8e-81 Identities = 150/162 (92%), Positives = 158/162 (97%) Frame = -3
Query: 486 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELTPEETENA 307 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTEL+PEE E+ Sbjct: 102 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELSPEEAEST 161
Query: 306 TGGYGKTISHVIIGMKTVKGTKQLKLDPTIYDALIKEKVTVGDVIYIEANSGAVKRVSRS 127 TGGYGK+ISHVIIG+KTVKGTKQLKLDPTIYDALIKEKV+VGDVIYIEANSGAVKRV R Sbjct: 162 TGGYGKSISHVIIGLKTVKGTKQLKLDPTIYDALIKEKVSVGDVIYIEANSGAVKRVGRC 221
Query: 126 DAFATEFDLEAEEYVPLPKGDVHKKKEIVQDVTLHDLDAANA 1 DAFATE+DLEAEEYVP+PKG+VHKKKEIVQDVTLHDLDAANA Sbjct: 222 DAFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANA 263
>tr|Q0D878|Q0D878_ORYSJ Os07g0178900 protein OS=Oryza sativa subsp. japonica GN=Os07g0178900 PE=4 SV=1 Length = 464
Score = 301 bits (772), Expect = 8e-81 Identities = 150/162 (92%), Positives = 158/162 (97%) Frame = -3
Query: 486 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELTPEETENA 307 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTEL+PEE E+ Sbjct: 87 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELSPEEAEST 146
Query: 306 TGGYGKTISHVIIGMKTVKGTKQLKLDPTIYDALIKEKVTVGDVIYIEANSGAVKRVSRS 127 TGGYGK+ISHVIIG+KTVKGTKQLKLDPTIYDALIKEKV+VGDVIYIEANSGAVKRV R Sbjct: 147 TGGYGKSISHVIIGLKTVKGTKQLKLDPTIYDALIKEKVSVGDVIYIEANSGAVKRVGRC 206
Query: 126 DAFATEFDLEAEEYVPLPKGDVHKKKEIVQDVTLHDLDAANA 1 DAFATE+DLEAEEYVP+PKG+VHKKKEIVQDVTLHDLDAANA Sbjct: 207 DAFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANA 248
>tr|B8B7Q1|B8B7Q1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25110 PE=4 SV=1 Length = 455
Score = 301 bits (772), Expect = 8e-81 Identities = 150/162 (92%), Positives = 158/162 (97%) Frame = -3
Query: 486 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELTPEETENA 307 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTEL+PEE E+ Sbjct: 87 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELSPEEAEST 146
Query: 306 TGGYGKTISHVIIGMKTVKGTKQLKLDPTIYDALIKEKVTVGDVIYIEANSGAVKRVSRS 127 TGGYGK+ISHVIIG+KTVKGTKQLKLDPTIYDALIKEKV+VGDVIYIEANSGAVKRV R Sbjct: 147 TGGYGKSISHVIIGLKTVKGTKQLKLDPTIYDALIKEKVSVGDVIYIEANSGAVKRVGRC 206
Query: 126 DAFATEFDLEAEEYVPLPKGDVHKKKEIVQDVTLHDLDAANA 1 DAFATE+DLEAEEYVP+PKG+VHKKKEIVQDVTLHDLDAANA Sbjct: 207 DAFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANA 248
>tr|B7FAF4|B7FAF4_ORYSJ cDNA, clone: J100068H15, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 455
Score = 301 bits (772), Expect = 8e-81 Identities = 150/162 (92%), Positives = 158/162 (97%) Frame = -3
Query: 486 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELTPEETENA 307 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTEL+PEE E+ Sbjct: 87 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELSPEEAEST 146
Query: 306 TGGYGKTISHVIIGMKTVKGTKQLKLDPTIYDALIKEKVTVGDVIYIEANSGAVKRVSRS 127 TGGYGK+ISHVIIG+KTVKGTKQLKLDPTIYDALIKEKV+VGDVIYIEANSGAVKRV R Sbjct: 147 TGGYGKSISHVIIGLKTVKGTKQLKLDPTIYDALIKEKVSVGDVIYIEANSGAVKRVGRC 206
Query: 126 DAFATEFDLEAEEYVPLPKGDVHKKKEIVQDVTLHDLDAANA 1 DAFATE+DLEAEEYVP+PKG+VHKKKEIVQDVTLHDLDAANA Sbjct: 207 DAFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANA 248
>tr|A3BH55|A3BH55_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_022377 PE=4 SV=1 Length = 395
Score = 301 bits (772), Expect = 8e-81 Identities = 150/162 (92%), Positives = 158/162 (97%) Frame = -3
Query: 486 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELTPEETENA 307 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTEL+PEE E+ Sbjct: 27 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELSPEEAEST 86
Query: 306 TGGYGKTISHVIIGMKTVKGTKQLKLDPTIYDALIKEKVTVGDVIYIEANSGAVKRVSRS 127 TGGYGK+ISHVIIG+KTVKGTKQLKLDPTIYDALIKEKV+VGDVIYIEANSGAVKRV R Sbjct: 87 TGGYGKSISHVIIGLKTVKGTKQLKLDPTIYDALIKEKVSVGDVIYIEANSGAVKRVGRC 146
Query: 126 DAFATEFDLEAEEYVPLPKGDVHKKKEIVQDVTLHDLDAANA 1 DAFATE+DLEAEEYVP+PKG+VHKKKEIVQDVTLHDLDAANA Sbjct: 147 DAFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANA 188
>tr|Q5QMH1|Q5QMH1_ORYSJ cDNA clone:001-124-H05, full insert sequence OS=Oryza sativa subsp. japonica GN=P0506B12.43-1 PE=2 SV=1 Length = 455
Score = 298 bits (762), Expect = 1e-79 Identities = 148/162 (91%), Positives = 156/162 (96%) Frame = -3
Query: 486 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELTPEETENA 307 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTEL+PEE E+ Sbjct: 87 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELSPEEAEST 146
Query: 306 TGGYGKTISHVIIGMKTVKGTKQLKLDPTIYDALIKEKVTVGDVIYIEANSGAVKRVSRS 127 T GYGK+ISHVIIG+KTVKGTKQLKLDPTIYDALIKEKV VGDVIYIEANSGAVKRV R Sbjct: 147 TSGYGKSISHVIIGLKTVKGTKQLKLDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRC 206
Query: 126 DAFATEFDLEAEEYVPLPKGDVHKKKEIVQDVTLHDLDAANA 1 D+FATE+DLEAEEYVP+PKG+VHKKKEIVQDVTLHDLDAANA Sbjct: 207 DSFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANA 248
>tr|A2WWS5|A2WWS5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04353 PE=4 SV=1 Length = 455
Score = 298 bits (762), Expect = 1e-79 Identities = 148/162 (91%), Positives = 156/162 (96%) Frame = -3
Query: 486 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELTPEETENA 307 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTEL+PEE E+ Sbjct: 87 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELSPEEAEST 146
Query: 306 TGGYGKTISHVIIGMKTVKGTKQLKLDPTIYDALIKEKVTVGDVIYIEANSGAVKRVSRS 127 T GYGK+ISHVIIG+KTVKGTKQLKLDPTIYDALIKEKV VGDVIYIEANSGAVKRV R Sbjct: 147 TSGYGKSISHVIIGLKTVKGTKQLKLDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRC 206
Query: 126 DAFATEFDLEAEEYVPLPKGDVHKKKEIVQDVTLHDLDAANA 1 D+FATE+DLEAEEYVP+PKG+VHKKKEIVQDVTLHDLDAANA Sbjct: 207 DSFATEYDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDAANA 248
>tr|A7NZI9|A7NZI9_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024530001 PE=4 SV=1 Length = 454
Score = 296 bits (759), Expect = 3e-79 Identities = 149/162 (91%), Positives = 157/162 (96%) Frame = -3
Query: 486 LGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELTPEETENA 307 LGSKVPFCPMVGSEVYSSEVKKTE+LMENFRRAIGLRIKENKEVYEGE +L+PEETE+ Sbjct: 87 LGSKVPFCPMVGSEVYSSEVKKTEILMENFRRAIGLRIKENKEVYEGEA-KLSPEETEST 145
Query: 306 TGGYGKTISHVIIGMKTVKGTKQLKLDPTIYDALIKEKVTVGDVIYIEANSGAVKRVSRS 127 TGGYGK+ISHVIIG+KTVKGTKQLKLDPTIYDALIKEKV VGDVIY+EANSGAVKRV RS Sbjct: 146 TGGYGKSISHVIIGLKTVKGTKQLKLDPTIYDALIKEKVAVGDVIYVEANSGAVKRVGRS 205
Query: 126 DAFATEFDLEAEEYVPLPKGDVHKKKEIVQDVTLHDLDAANA 1 DAFATEFDLEAEEYVPLPKG+VHKKKEIVQDVTLHDLDAANA Sbjct: 206 DAFATEFDLEAEEYVPLPKGEVHKKKEIVQDVTLHDLDAANA 247
|