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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919213
Clone id YMU001_000122_E06
Library
Length 293
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000122_E06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTTTTTTTTTTTTGAGGACTCTTAACTAATGCTACAGAATAGAAAAAAATACAGGTAA
ATTTTGTTACTGTTGCTAGAAACAGAACACACCTATATTCTGGATTAGAAAAGATTAAAT
CAAAACTTTGATACTGCTACTATTATACAAATGCAATACCCTTTAAGTCCGAACCAAATG
GATGAAAAACCAATTCAAATGAATCAAGTGGGGCTACCGATGAGGCTTTGGCAGAGGTGG
GCTTTGATAGGAATTTTTGAAGAGAAATAGTAAATACACCTCTGAAAAAGGGC
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919213|Adiantum capillus-veneris mRNA, clone:
YMU001_000122_E06.
         (278 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id B4KUB3
Definition tr|B4KUB3|B4KUB3_DROMO GI18892 OS=Drosophila mojavensis
Align length 45
Score (bit) 33.1
E-value 7.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919213|Adiantum capillus-veneris mRNA, clone:
YMU001_000122_E06.
         (278 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4KUB3|B4KUB3_DROMO GI18892 OS=Drosophila mojavensis GN=GI188...    33   7.2  
tr|Q2GQD4|Q2GQD4_CHAGB Putative uncharacterized protein OS=Chaet...    33   9.4  

>tr|B4KUB3|B4KUB3_DROMO GI18892 OS=Drosophila mojavensis GN=GI18892
           PE=4 SV=1
          Length = 2008

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = +3

Query: 90  LEKIKSKL*YCYYYTNAIPFKSEPNG*KTNSNESSGATDEALAEV 224
           L+ I+S + Y Y   N  P  S PNG   NSN SSG + E++ ++
Sbjct: 125 LDNIQSLVPYLYKEFNISPINSNPNG---NSNNSSGESRESVGDM 166


>tr|Q2GQD4|Q2GQD4_CHAGB Putative uncharacterized protein
           OS=Chaetomium globosum GN=CHGG_09820 PE=4 SV=1
          Length = 391

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = +1

Query: 115 DTATIIQMQYPLSPNQMDEKPIQMNQVGLPMRLWQRW 225
           DTA    M+Y L+ N+  +KPI+MN    P+ LW+ W
Sbjct: 93  DTARFKVMKYLLAGNEPHDKPIRMNH---PVFLWEVW 126