BP919218
Clone id YMU001_000122_E11
Library
Length 400
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000122_E11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AAAAACCCTTGAGCTTCTTTGCTCTACCCTTGTGGTACATAACCTTCAGTAAGTCCAATC
CAAGAGATGACATATAGAACCACAAGGCCTTGCACAACTTGTTATACACGAGCAGGAGCA
TTGCACTTGGCATACATTATCCCCTCAATCAAGGCACTACAAGAAATAACAGCATGCATG
CTATTGCATTCTTACCACTTTCTTTTAGTAAGGTCACAAAACAGTGACTCATTATTATTG
AGCCCTTAACTACATCCTTTTGTCCATTTTGGAAATATCCAACCATAATTGCATCCAAAA
GATGACATCATGGAAAAAAAAAATCTCATCAATGAGATGCTTTGGCCAATGCATGACAAT
TGGCATAGATACTCGCCAATCGTTACGTAAGCACGGCTCC
■■Homology search results ■■ -
sp_hit_id Q6MTU2
Definition sp|Q6MTU2|SYV_MYCMS Valyl-tRNA synthetase OS=Mycoplasma mycoides subsp. mycoides SC
Align length 35
Score (bit) 30.4
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919218|Adiantum capillus-veneris mRNA, clone:
YMU001_000122_E11.
(400 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6MTU2|SYV_MYCMS Valyl-tRNA synthetase OS=Mycoplasma mycoides... 30 2.9
sp|Q91ZC4|MRGA8_MOUSE Mas-related G-protein coupled receptor mem... 30 4.9
sp|O49421|FB238_ARATH F-box protein At4g19940 OS=Arabidopsis tha... 30 4.9
sp|A6QLA0|NFX1_BOVIN Transcriptional repressor NF-X1 OS=Bos taur... 29 6.3
sp|P36029|TPO5_YEAST Polyamine transporter TPO5 OS=Saccharomyces... 29 8.3
sp|Q9UPZ6|THS7A_HUMAN Thrombospondin type-1 domain-containing pr... 29 8.3
sp|Q057X9|SYI_BUCCC Isoleucyl-tRNA synthetase OS=Buchnera aphidi... 29 8.3

>sp|Q6MTU2|SYV_MYCMS Valyl-tRNA synthetase OS=Mycoplasma mycoides
subsp. mycoides SC GN=valS PE=3 SV=1
Length = 872

Score = 30.4 bits (67), Expect = 2.9
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3

Query: 33 WYITFSKSNPRDDI*NHKALHNLLYTSRSIALGIH 137
WYI FSK N +D H+ L Y + I + +H
Sbjct: 648 WYIEFSKVNLNNDKFTHQTKQTLFYVLKEILIMLH 682


>sp|Q91ZC4|MRGA8_MOUSE Mas-related G-protein coupled receptor member
A8 OS=Mus musculus GN=Mrgpra8 PE=2 SV=1
Length = 305

Score = 29.6 bits (65), Expect = 4.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -1

Query: 325 DFFFP*CHLLDAIMVGYFQNGQKDVVKGSIIMSHCFVTLL 206
DFF+ CH++++IM V +II+ HCF T++
Sbjct: 58 DFFYLLCHIINSIMF------LLKVPSPNIILDHCFYTIM 91


>sp|O49421|FB238_ARATH F-box protein At4g19940 OS=Arabidopsis
thaliana GN=At4g19940 PE=2 SV=1
Length = 411

Score = 29.6 bits (65), Expect = 4.9
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Frame = +3

Query: 135 HYPLNQGTTRNNSMHAIAFLPLSFSKVTKQ*LIIIEPLTTSFCP-------FWKY 278
H PL QG T + MH +A++ +S ++V L+I + + F FWKY
Sbjct: 237 HVPLGQGLTLSGRMHYLAWVRVSDNRV----LVIFDTHSEEFSMLQVPGDIFWKY 287


>sp|A6QLA0|NFX1_BOVIN Transcriptional repressor NF-X1 OS=Bos taurus
GN=NFX1 PE=2 SV=1
Length = 1116

Score = 29.3 bits (64), Expect = 6.3
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -2

Query: 180 HAC---CYFL*CLD*GDNVCQVQCSCSCITSCARPCGSICHL 64
H C C+ CL GD +C+ C+ S +C PC + CHL
Sbjct: 832 HKCQRLCHKGECL--GDEICKQPCTTSR-ANCGHPCMAPCHL 870


>sp|P36029|TPO5_YEAST Polyamine transporter TPO5 OS=Saccharomyces
cerevisiae GN=TPO5 PE=1 SV=1
Length = 618

Score = 28.9 bits (63), Expect = 8.3
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -1

Query: 124 AMLLLVYNKLCKALWFYMSSLGLDLLKVMYHKGRAKKLK 8
A + NK+C W + + +D+L +++HKG+ + LK
Sbjct: 203 ARFIETINKVC-VYWIIYAIIFIDILLLVFHKGKFRSLK 240


>sp|Q9UPZ6|THS7A_HUMAN Thrombospondin type-1 domain-containing protein
7A OS=Homo sapiens GN=THSD7A PE=1 SV=3
Length = 1657

Score = 28.9 bits (63), Expect = 8.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2

Query: 99 SCARPCGSICHLLDWTY*RLC 37
SC++PC C+L DW+ LC
Sbjct: 1406 SCSQPCPGDCYLKDWSSWSLC 1426


>sp|Q057X9|SYI_BUCCC Isoleucyl-tRNA synthetase OS=Buchnera
aphidicola subsp. Cinara cedri GN=ileS PE=3 SV=1
Length = 941

Score = 28.9 bits (63), Expect = 8.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3

Query: 3 KPLSFFALPLWYITFSKSNPRDDI*N 80
KP+ F A P W+I SK N ++D N
Sbjct: 412 KPIIFRATPQWFINLSKKNFKEDTFN 437


tr_hit_id B6SM22
Definition tr|B6SM22|B6SM22_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 52
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919218|Adiantum capillus-veneris mRNA, clone:
YMU001_000122_E11.
(400 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6SM22|B6SM22_MAIZE Putative uncharacterized protein OS=Zea m... 34 3.2
tr|B6SP47|B6SP47_MAIZE Putative uncharacterized protein OS=Zea m... 34 4.1
tr|A1DFT8|A1DFT8_NEOFI NF-X1 finger and helicase protein, putati... 33 7.0

>tr|B6SM22|B6SM22_MAIZE Putative uncharacterized protein OS=Zea mays
PE=4 SV=1
Length = 109

Score = 34.3 bits (77), Expect = 3.2
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = -3

Query: 287 YGWIFPKWTKGCS*GLNNNESLFCDLTKRK----W*ECNSMHAVISCSALIE 144
YGWIF +WT L+ +FC LT + C+ +AV S S ++E
Sbjct: 28 YGWIFDEWTHPADQALSGGRGMFCALTMARSLVSAAACSINYAVSSISRVLE 79


>tr|B6SP47|B6SP47_MAIZE Putative uncharacterized protein OS=Zea mays
PE=4 SV=1
Length = 109

Score = 33.9 bits (76), Expect = 4.1
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3

Query: 287 YGWIFPKWTKGCS*GLNNNESLFCDLTKRKW*ECNSMHAVISCS 156
YGWIF +WT+ L+ +FC LT + S+ + +CS
Sbjct: 28 YGWIFDEWTRPADQALSGGRGMFCALTMAR-----SLVSAAACS 66


>tr|A1DFT8|A1DFT8_NEOFI NF-X1 finger and helicase protein, putative
OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
NRRL 181) GN=NFIA_081920 PE=4 SV=1
Length = 1940

Score = 33.1 bits (74), Expect = 7.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -2

Query: 132 CQVQCSC--SCITSCARPCGSICHLLDWTY*RLCTTRVEQRSSR 7
C QC+ +C +C RPC LLDW R+ R +Q+ R
Sbjct: 1355 CTAQCNALLTCGHTCKRPCHHCVQLLDWEEVRIDHGRCQQKCGR 1398