BP919219 |
Clone id |
YMU001_000122_E12 |
Library |
YMU01 |
Length |
568 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000122_E12. |
Accession |
BP919219 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1717Contig1 |
Sequence |
ATGGGAAGCATCAGGGCAAATAGATTTGCTACATAGTCTTGCAAACCCACCATTGCAAAT GAGGCCCATGAATCAGAAAAGGTGAAGACAATACACAAACGTATAACCTTGTACCGGCAC TTCATCCTCAGAGCTGACAGCCTCCACCCATATCAACACAGGCCAAAGTTTTTGCCAGCA TCTTTCTGCATGAGCTCGTGAATGCAACCACATTAGTGGTGCAGCAGCTCGGTAAAAATC AAGCACCATACCTACCAGCTGCCCTTCAGAATCTGAAGTTTCTTCATTGCTGGACAAATG ATCCATAATCAGGGATGCTTTCACACCCAGGACAGTTATGCAGACTTTCGTGGATATAAA CATCACAATCAAAACAAAAATGTTGCTTGCACCTGGGGCAAACCACTAGCACACCCGTCA CCTTGCTTCCTCCAACGGGAAGGTCTTGCTGGCATCCAAAGCAGCTCTTTGGGAGCCTAG ATGGTGCAACAGTTGGCACGACTTCCTCAAATGATGCAACAGGAAATAGATAGTGATATG ACCTTGCCAAATGGGGAGATGACACTAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q04673 |
Definition |
sp|Q04673|SSL1_YEAST Suppressor of stem-loop protein 1 OS=Saccharomyces cerevisiae |
Align length |
91 |
Score (bit) |
94.0 |
E-value |
5.0e-19 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SFF5 |
Definition |
tr|A9SFF5|A9SFF5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
87 |
Score (bit) |
132.0 |
E-value |
2.0e-29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919219|Adiantum capillus-veneris mRNA, clone: YMU001_000122_E12. (568 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SFF5|A9SFF5_PHYPA Predicted protein OS=Physcomitrella paten... 132 2e-29 tr|A7NZG2|A7NZG2_VITVI Chromosome chr6 scaffold_3, whole genome ... 120 4e-26 tr|A5B9J1|A5B9J1_VITVI Putative uncharacterized protein OS=Vitis... 120 4e-26 tr|Q9ZVN9|Q9ZVN9_ARATH T7A14.8 protein (Putative transcription f... 115 2e-24 tr|Q0WLZ8|Q0WLZ8_ARATH Putative transcription factor OS=Arabidop... 115 2e-24 tr|B4G0C7|B4G0C7_MAIZE Putative uncharacterized protein OS=Zea m... 114 4e-24 tr|Q7XM94|Q7XM94_ORYSJ OSJNBa0043L24.23 protein OS=Oryza sativa ... 112 1e-23 tr|Q01I82|Q01I82_ORYSA OSIGBa0101P20.13 protein OS=Oryza sativa ... 112 1e-23 tr|Q6CNV5|Q6CNV5_KLULA KLLA0E09615p OS=Kluyveromyces lactis GN=K... 96 1e-18 tr|Q9VNP8|Q9VNP8_DROME Ssl1 OS=Drosophila melanogaster GN=Ssl1 P... 95 3e-18 tr|B4QLB8|B4QLB8_DROSI GD15058 OS=Drosophila simulans GN=GD15058... 95 3e-18 tr|B4IB56|B4IB56_DROSE GM22477 OS=Drosophila sechellia GN=GM2247... 95 3e-18 tr|Q6B237|Q6B237_YEAST YLR005W OS=Saccharomyces cerevisiae GN=SS... 94 5e-18 tr|B5VMU6|B5VMU6_YEAS6 YLR005Wp-like protein OS=Saccharomyces ce... 94 5e-18 tr|B3LSX8|B3LSX8_YEAS1 Suppressor of stem-loop protein 1 OS=Sacc... 94 5e-18 tr|A8IDI5|A8IDI5_CHLRE Transcription factor TFIIH, 44 kDa subuni... 93 1e-17 tr|A7A0R0|A7A0R0_YEAS7 Transcription initiation factor TFIIH sub... 93 1e-17 tr|B4LDP4|B4LDP4_DROVI GJ11798 OS=Drosophila virilis GN=GJ11798 ... 92 3e-17 tr|B4PIR4|B4PIR4_DROYA GE22646 OS=Drosophila yakuba GN=GE22646 P... 91 3e-17 tr|B3NEG9|B3NEG9_DROER GG16285 OS=Drosophila erecta GN=GG16285 P... 91 4e-17 tr|A7TJ61|A7TJ61_VANPO Putative uncharacterized protein OS=Vande... 91 6e-17 tr|B4KYL1|B4KYL1_DROMO GI13436 OS=Drosophila mojavensis GN=GI134... 90 1e-16 tr|Q7PPS5|Q7PPS5_ANOGA AGAP010559-PA OS=Anopheles gambiae GN=AGA... 89 1e-16 tr|A7S1M7|A7S1M7_NEMVE Predicted protein OS=Nematostella vectens... 89 2e-16 tr|B6NEZ3|B6NEZ3_BRAFL Putative uncharacterized protein OS=Branc... 88 4e-16 tr|B4J3S1|B4J3S1_DROGR GH16776 OS=Drosophila grimshawi GN=GH1677... 88 4e-16 tr|B3MBA0|B3MBA0_DROAN GF11005 OS=Drosophila ananassae GN=GF1100... 87 8e-16 tr|A3LN57|A3LN57_PICST Predicted protein OS=Pichia stipitis GN=P... 86 1e-15 tr|Q6FTA5|Q6FTA5_CANGA Similar to uniprot|Q04673 Saccharomyces c... 86 1e-15 tr|B4N3K4|B4N3K4_DROWI GK12882 OS=Drosophila willistoni GN=GK128... 86 2e-15
>tr|A9SFF5|A9SFF5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_106349 PE=4 SV=1 Length = 394
Score = 132 bits (331), Expect = 2e-29 Identities = 60/87 (68%), Positives = 68/87 (78%), Gaps = 3/87 (3%) Frame = -1
Query: 568 LVSSPHLARSYHYLFPVASFEEVVPTVAPS---RLPKSCFGCQQDLPVGGSKVTGVLVVC 398 LVSSPHLARSYH+LFPV+ FEEV + + L KSC+GC Q+LP G KV GV + C Sbjct: 298 LVSSPHLARSYHHLFPVSPFEEVENLASANGRQSLSKSCYGCLQELPTPGGKVKGVRLEC 357
Query: 397 PRCKQHFCFDCDVYIHESLHNCPGCES 317 PRC+QHFCFDCD YIHESLHNCPGCES Sbjct: 358 PRCRQHFCFDCDNYIHESLHNCPGCES 384
>tr|A7NZG2|A7NZG2_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024501001 PE=4 SV=1 Length = 433
Score = 120 bits (302), Expect = 4e-26 Identities = 54/87 (62%), Positives = 68/87 (78%), Gaps = 3/87 (3%) Frame = -1
Query: 568 LVSSPHLARSYHYLFPVASFEEVVPTVAPS---RLPKSCFGCQQDLPVGGSKVTGVLVVC 398 LVSSPHLARSYH+LFP+ F+EV ++ + R ++CFGCQ+ L + G+K T + V C Sbjct: 336 LVSSPHLARSYHHLFPIPPFDEVSLSLLNNPHQRSSRACFGCQESLLIPGNKPT-LCVAC 394
Query: 397 PRCKQHFCFDCDVYIHESLHNCPGCES 317 P+CKQHFC DCD+YIHESLHNCPGCES Sbjct: 395 PKCKQHFCLDCDIYIHESLHNCPGCES 421
>tr|A5B9J1|A5B9J1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011714 PE=4 SV=1 Length = 199
Score = 120 bits (302), Expect = 4e-26 Identities = 54/87 (62%), Positives = 68/87 (78%), Gaps = 3/87 (3%) Frame = -1
Query: 568 LVSSPHLARSYHYLFPVASFEEVVPTVAPS---RLPKSCFGCQQDLPVGGSKVTGVLVVC 398 LVSSPHLARSYH+LFP+ F+EV ++ + R ++CFGCQ+ L + G+K T + V C Sbjct: 102 LVSSPHLARSYHHLFPIPPFDEVSLSLLNNPHQRSSRACFGCQESLLIPGNKPT-LCVAC 160
Query: 397 PRCKQHFCFDCDVYIHESLHNCPGCES 317 P+CKQHFC DCD+YIHESLHNCPGCES Sbjct: 161 PKCKQHFCLDCDIYIHESLHNCPGCES 187
>tr|Q9ZVN9|Q9ZVN9_ARATH T7A14.8 protein (Putative transcription factor) (P44/SSL1-like protein) OS=Arabidopsis thaliana GN=At1g05055 PE=2 SV=1 Length = 421
Score = 115 bits (288), Expect = 2e-24 Identities = 56/90 (62%), Positives = 66/90 (73%), Gaps = 5/90 (5%) Frame = -1
Query: 568 LVSSPHLARSYHYLFPVASFEEVVPTVAP-----SRLPKSCFGCQQDLPVGGSKVTGVLV 404 LVSSPHLARSYH+LFP+A F+EV P ++ +L KSCFGCQQ L G+K V Sbjct: 323 LVSSPHLARSYHHLFPIAPFDEV-PALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPC-V 380
Query: 403 VCPRCKQHFCFDCDVYIHESLHNCPGCESI 314 C +CK +FC DCD+YIHESLHNCPGCESI Sbjct: 381 TCRKCKHYFCLDCDIYIHESLHNCPGCESI 410
>tr|Q0WLZ8|Q0WLZ8_ARATH Putative transcription factor OS=Arabidopsis thaliana GN=At1g05055 PE=2 SV=1 Length = 196
Score = 115 bits (288), Expect = 2e-24 Identities = 56/90 (62%), Positives = 66/90 (73%), Gaps = 5/90 (5%) Frame = -1
Query: 568 LVSSPHLARSYHYLFPVASFEEVVPTVAP-----SRLPKSCFGCQQDLPVGGSKVTGVLV 404 LVSSPHLARSYH+LFP+A F+EV P ++ +L KSCFGCQQ L G+K V Sbjct: 98 LVSSPHLARSYHHLFPIAPFDEV-PALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPC-V 155
Query: 403 VCPRCKQHFCFDCDVYIHESLHNCPGCESI 314 C +CK +FC DCD+YIHESLHNCPGCESI Sbjct: 156 TCRKCKHYFCLDCDIYIHESLHNCPGCESI 185
>tr|B4G0C7|B4G0C7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 428
Score = 114 bits (285), Expect = 4e-24 Identities = 56/89 (62%), Positives = 64/89 (71%), Gaps = 5/89 (5%) Frame = -1
Query: 568 LVSSPHLARSYHYLFPVASFEEVVPTVAPSRLPKS---CFGCQQDL--PVGGSKVTGVLV 404 LVSSPHLARSYH+LFPV F+EV P P+R+ + CF CQQ L P G S + V Sbjct: 339 LVSSPHLARSYHHLFPVPPFDEVTPV--PNRIQRGGQICFSCQQSLYNPDGQSNLH---V 393
Query: 403 VCPRCKQHFCFDCDVYIHESLHNCPGCES 317 CP+C QHFC DCD+YIHESLHNCPGCES Sbjct: 394 RCPKCNQHFCLDCDIYIHESLHNCPGCES 422
>tr|Q7XM94|Q7XM94_ORYSJ OSJNBa0043L24.23 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0043L24.23 PE=4 SV=1 Length = 432
Score = 112 bits (281), Expect = 1e-23 Identities = 53/88 (60%), Positives = 64/88 (72%), Gaps = 4/88 (4%) Frame = -1
Query: 568 LVSSPHLARSYHYLFPVASFEEVVPTVAPSRLPKS----CFGCQQDLPVGGSKVTGVLVV 401 LVSSPHLARSYH+LFPV F+EV +V P+RL + C+GCQQ + + + V Sbjct: 342 LVSSPHLARSYHHLFPVQPFDEV-SSVHPNRLGQKGGQKCYGCQQSF-INPDSQSSLHVR 399
Query: 400 CPRCKQHFCFDCDVYIHESLHNCPGCES 317 CP+C QHFC DCD+YIHESLHNCPGCES Sbjct: 400 CPKCNQHFCLDCDIYIHESLHNCPGCES 427
>tr|Q01I82|Q01I82_ORYSA OSIGBa0101P20.13 protein OS=Oryza sativa GN=OSIGBa0101P20.13 PE=4 SV=1 Length = 432
Score = 112 bits (281), Expect = 1e-23 Identities = 53/88 (60%), Positives = 64/88 (72%), Gaps = 4/88 (4%) Frame = -1
Query: 568 LVSSPHLARSYHYLFPVASFEEVVPTVAPSRLPKS----CFGCQQDLPVGGSKVTGVLVV 401 LVSSPHLARSYH+LFPV F+EV +V P+RL + C+GCQQ + + + V Sbjct: 342 LVSSPHLARSYHHLFPVQPFDEV-SSVHPNRLGQKGGQKCYGCQQSF-INPDSQSSLHVR 399
Query: 400 CPRCKQHFCFDCDVYIHESLHNCPGCES 317 CP+C QHFC DCD+YIHESLHNCPGCES Sbjct: 400 CPKCNQHFCLDCDIYIHESLHNCPGCES 427
>tr|Q6CNV5|Q6CNV5_KLULA KLLA0E09615p OS=Kluyveromyces lactis GN=KLLA0E09615g PE=4 SV=1 Length = 488
Score = 96.3 bits (238), Expect = 1e-18 Identities = 47/91 (51%), Positives = 58/91 (63%), Gaps = 5/91 (5%) Frame = -1
Query: 568 LVSSPHLARSYHYLFPVASFEEVVPTVAPSRLPKSCFGCQQDLPVGGSKVTGVLVV---- 401 L+ S HLARSYH+L P+ +F+EV V+ S CFGCQ+ P + TG L+ Sbjct: 394 LILSTHLARSYHHLMPLKTFQEV--PVSDSFPTDYCFGCQKRFPTLRNNKTGELLTSSRY 451
Query: 400 -CPRCKQHFCFDCDVYIHESLHNCPGCESIP 311 C C Q FC DCDV+IHE+LHNCPGCES P Sbjct: 452 RCEECDQDFCIDCDVFIHETLHNCPGCESKP 482
>tr|Q9VNP8|Q9VNP8_DROME Ssl1 OS=Drosophila melanogaster GN=Ssl1 PE=2 SV=2 Length = 438
Score = 94.7 bits (234), Expect = 3e-18 Identities = 47/101 (46%), Positives = 61/101 (60%), Gaps = 7/101 (6%) Frame = -1
Query: 568 LVSSPHLARSYHYLFPVASFEEVVPTVAPSRLP------KSCFGCQQDLPVGGSKVTGVL 407 LVS+PHLARSYH+LFPV +FEE+ P+ + C+GC + L G KV + Sbjct: 315 LVSAPHLARSYHHLFPVPNFEELPFEAMPASSSDLTSDVRECYGCAKALGQGVDKVADKV 374
Query: 406 VV-CPRCKQHFCFDCDVYIHESLHNCPGCESIPDYGSFVQQ 287 V C CKQ FC DCD++IH++LH C GC +IP V Q Sbjct: 375 VFRCGFCKQFFCVDCDIFIHDTLHACVGCNTIPGVDGLVYQ 415
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