BP919224 |
Clone id |
YMU001_000122_F05 |
Library |
YMU01 |
Length |
317 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000122_F05. |
Accession |
BP919224 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TTTTTCCTCTTATTCTAGGCATCGGATTAGTTCTAACTCCTTTTGTTTTTTTCTTTGCTC TATAGTGTTTCTGGCGTTGTTTAGTTTGGTTCGGAAAATCATAAAATCAGACATCCGTTA TAGTTTCTTCGTTTCCGCTTGAATTGTCCGTTGACTCGTTGTCTGCTTCATTTCCCCACT CTGGATGATTGGGAATGTCGTGAAACACCTCTTCTTCATCTTCCTTTTCCAGTGTATCGT TCTTTTCAGTTTCTTTTTCGAGTACAGTTCTCAACATGAAATACGGAACCACGTCGTACC CATCCTTGTCGCAAAAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q96MU7 |
Definition |
sp|Q96MU7|YTDC1_HUMAN YTH domain-containing protein 1 OS=Homo sapiens |
Align length |
44 |
Score (bit) |
34.3 |
E-value |
0.2 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q54JF7 |
Definition |
tr|Q54JF7|Q54JF7_DICDI Putative uncharacterized protein OS=Dictyostelium discoideum |
Align length |
91 |
Score (bit) |
40.8 |
E-value |
0.034 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919224|Adiantum capillus-veneris mRNA, clone: YMU001_000122_F05. (317 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q54JF7|Q54JF7_DICDI Putative uncharacterized protein OS=Dicty... 41 0.034 tr|Q4Z412|Q4Z412_PLABE Putative uncharacterized protein OS=Plasm... 40 0.058 tr|Q7RF59|Q7RF59_PLAYO Putative uncharacterized protein PY04851 ... 40 0.076 tr|Q4YQT9|Q4YQT9_PLABE Putative uncharacterized protein OS=Plasm... 40 0.076 tr|Q59YV6|Q59YV6_CANAL Putative uncharacterized protein OS=Candi... 38 0.22 tr|B0F9S8|B0F9S8_TRISP Putative uncharacterized protein OS=Trich... 38 0.29 tr|Q4YBY3|Q4YBY3_PLABE Putative uncharacterized protein (Fragmen... 37 0.49 tr|A5KAV6|A5KAV6_PLAVI Merozoite surface protein 3 (MSP3), putat... 37 0.49 tr|A5E3S7|A5E3S7_LODEL Ribosome biogenesis protein RLP24 OS=Lodd... 37 0.49 tr|Q2UK75|Q2UK75_ASPOR Uncharacterized conserved protein OS=Aspe... 37 0.64 tr|B8N3J1|B8N3J1_ASPFL Small nucleolar ribonucleoprotein complex... 37 0.64 tr|A2FHE6|A2FHE6_TRIVA Putative uncharacterized protein OS=Trich... 36 0.84 tr|A0DIG2|A0DIG2_PARTE Chromosome undetermined scaffold_51, whol... 36 0.84 tr|A2G7S2|A2G7S2_TRIVA Putative uncharacterized protein OS=Trich... 36 1.1 tr|Q5JKR3|Q5JKR3_ORYSJ cDNA clone:J013135L15, full insert sequen... 35 1.4 tr|B8AAC5|B8AAC5_ORYSI Putative uncharacterized protein OS=Oryza... 35 1.4 tr|A2ZUD8|A2ZUD8_ORYSJ Putative uncharacterized protein OS=Oryza... 35 1.4 tr|Q4Z5T9|Q4Z5T9_PLABE Putative uncharacterized protein OS=Plasm... 35 1.9 tr|B4IXV2|B4IXV2_DROGR GH16267 OS=Drosophila grimshawi GN=GH1626... 35 1.9 tr|A5KC27|A5KC27_PLAVI Putative uncharacterized protein OS=Plasm... 35 1.9 tr|Q5AJI1|Q5AJI1_CANAL Putative uncharacterized protein OS=Candi... 35 1.9 tr|A5E6I9|A5E6I9_LODEL Putative uncharacterized protein OS=Lodde... 35 1.9 tr|Q8CV90|Q8CV90_OCEIH Hypothetical conserved protein OS=Oceanob... 35 2.4 tr|Q8I5Y6|Q8I5Y6_PLAF7 Putative uncharacterized protein OS=Plasm... 35 2.4 tr|Q7PDN6|Q7PDN6_PLAYO Heme/Steroid binding domain, putative OS=... 35 2.4 tr|B6NWD8|B6NWD8_BRAFL Putative uncharacterized protein (Fragmen... 35 2.4 tr|Q55R44|Q55R44_CRYNE Putative uncharacterized protein OS=Crypt... 35 2.4 tr|Q2HUC0|Q2HUC0_MEDTR Mak16 protein OS=Medicago truncatula GN=M... 34 3.2 tr|Q5RA71|Q5RA71_PONAB Putative uncharacterized protein DKFZp459... 34 3.2 tr|Q5MY92|Q5MY92_PLABE Rhoptry associated membrane antigen OS=Pl... 34 3.2
>tr|Q54JF7|Q54JF7_DICDI Putative uncharacterized protein OS=Dictyostelium discoideum GN=DDB_0219308 PE=4 SV=1 Length = 1435
Score = 40.8 bits (94), Expect = 0.034 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 9/91 (9%) Frame = -2
Query: 259 EKETEKNDTLEKEDEEEVFHDIPNHPEWGNEADNES---------TDNSSGNEETITDV* 107 EKE EK EKE+E E ++ N E GNE +NE+ +N +GNE + Sbjct: 455 EKEREKEKEREKENENENENENENENENGNENENENENENENENENENENGNENGNENGN 514
Query: 106 FYDFPNQTKQRQKHYRAKKKTKGVRTNPMPR 14 + N +Q K + +++TK +TNP+ + Sbjct: 515 GKENGNGKEQETKEIKDEEETKD-KTNPLSK 544
>tr|Q4Z412|Q4Z412_PLABE Putative uncharacterized protein OS=Plasmodium berghei GN=PB000977.00.0 PE=4 SV=1 Length = 464
Score = 40.0 bits (92), Expect = 0.058 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%) Frame = -2
Query: 310 DKDGYDVVPYFMLRTVLEKETEK---NDTLEKEDEEEVFHDIPNHPEWGNEADNESTDNS 140 +KD D V + T + K ND ++ D+E+++ H + +E +NE +DN+ Sbjct: 240 NKDEIDYVDSALSITEIRKNKSSWDYNDDGKRSDDEDLYMQESAHEFFDDEDENEESDNN 299
Query: 139 SGNEETI 119 SGNEE+I Sbjct: 300 SGNEESI 306
>tr|Q7RF59|Q7RF59_PLAYO Putative uncharacterized protein PY04851 OS=Plasmodium yoelii yoelii GN=PY04851 PE=4 SV=1 Length = 546
Score = 39.7 bits (91), Expect = 0.076 Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%) Frame = -2
Query: 310 DKDGYDVVPYFMLRTVLEKET---EKNDTLEKEDEEEVFHDIPNHPEWGNEADNESTDNS 140 +KD D V + T + K + ND ++ D+E+++ H + +E +NE +DN+ Sbjct: 236 NKDEIDYVDSALSITEIRKNKSTWDYNDDGKRSDDEDLYIQESAHEFFDDEDENEESDNN 295
Query: 139 SGNEETI 119 SGNEE+I Sbjct: 296 SGNEESI 302
>tr|Q4YQT9|Q4YQT9_PLABE Putative uncharacterized protein OS=Plasmodium berghei GN=PB000382.03.0 PE=4 SV=1 Length = 345
Score = 39.7 bits (91), Expect = 0.076 Identities = 23/73 (31%), Positives = 38/73 (52%) Frame = -2
Query: 259 EKETEKNDTLEKEDEEEVFHDIPNHPEWGNEADNESTDNSSGNEETITDV*FYDFPNQTK 80 +KE K + L+ ED + ++PN+ A+NE+TDN N E F++F N+ Sbjct: 267 DKEGNKYEHLKDEDNVNNYENVPNYE----NANNENTDNEKLNME----FDFFEFKNEES 318
Query: 79 QRQKHYRAKKKTK 41 ++ + KKK K Sbjct: 319 YNSQYEKKKKKKK 331
>tr|Q59YV6|Q59YV6_CANAL Putative uncharacterized protein OS=Candida albicans GN=USO6 PE=4 SV=1 Length = 1130
Score = 38.1 bits (87), Expect = 0.22 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 6/86 (6%) Frame = -2
Query: 265 VLEKETEKNDTLEKEDEEEVFHDIPNHPEWGNEADNESTDNSSGNEETITDV*FYDFP-- 92 ++ KE E D K+D ++V + N E NE D+ +TDN + +T D P Sbjct: 1041 IVNKEEEDKDKDVKDDNKDVNKAVDNDKENENEEDDYNTDNENNTLKTPYDFEASPSPSP 1100
Query: 91 ---NQTKQRQKHYRAKK-KTKGVRTN 26 +Q+ Q QK +KK K KG + N Sbjct: 1101 SISSQSSQSQKSSPSKKNKKKGKKKN 1126
>tr|B0F9S8|B0F9S8_TRISP Putative uncharacterized protein OS=Trichinella spiralis PE=2 SV=1 Length = 174
Score = 37.7 bits (86), Expect = 0.29 Identities = 17/46 (36%), Positives = 28/46 (60%) Frame = -2
Query: 259 EKETEKNDTLEKEDEEEVFHDIPNHPEWGNEADNESTDNSSGNEET 122 +++ EK + E++DE P PE N +D++S+D+ S NEET Sbjct: 30 QEDIEKAKSFEEDDEPNKAFQKPRIPEQQNSSDSDSSDDESDNEET 75
>tr|Q4YBY3|Q4YBY3_PLABE Putative uncharacterized protein (Fragment) OS=Plasmodium berghei GN=PB000337.02.0 PE=4 SV=1 Length = 953
Score = 37.0 bits (84), Expect = 0.49 Identities = 19/83 (22%), Positives = 38/83 (45%) Frame = -2
Query: 259 EKETEKNDTLEKEDEEEVFHDIPNHPEWGNEADNESTDNSSGNEETITDV*FYDFPNQTK 80 + E++KN T E E V + + N+ + ++++NS+ +E + +F N Sbjct: 227 DSESDKNSTSENEHNNSVIDNEQSESYSTNDENTDNSENSTNSESQENSQIYRNFENSDL 286
Query: 79 QRQKHYRAKKKTKGVRTNPMPRI 11 + + KKK K + N + I Sbjct: 287 NDENRIKKKKKKKKITENNLAEI 309
>tr|A5KAV6|A5KAV6_PLAVI Merozoite surface protein 3 (MSP3), putative OS=Plasmodium vivax GN=PVX_097700 PE=4 SV=1 Length = 1140
Score = 37.0 bits (84), Expect = 0.49 Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%) Frame = -2
Query: 307 KDGYDVVPY--FMLRTVLEKETEKNDTLEKEDEEEVFHDIPNHPEWGNEADNESTDNSSG 134 K+GY+ V +L V E+ +E + E++DEEE H +PN E ++ D+E + Sbjct: 979 KEGYNTVDSDEHVLNEVEEQASEAKEEEEEDDEEEAEHSLPNDVEIEDD-DDEGEEEEKE 1037
Query: 133 NEET 122 EET Sbjct: 1038 EEET 1041
>tr|A5E3S7|A5E3S7_LODEL Ribosome biogenesis protein RLP24 OS=Lodderomyces elongisporus GN=LELG_04265 PE=4 SV=1 Length = 212
Score = 37.0 bits (84), Expect = 0.49 Identities = 19/54 (35%), Positives = 27/54 (50%) Frame = -2
Query: 274 LRTVLEKETEKNDTLEKEDEEEVFHDIPNHPEWGNEADNESTDNSSGNEETITD 113 LR EK+ K + +E+EDEEE D+ E + D E S G E+ T+ Sbjct: 141 LRRKAEKQAAKENAMEEEDEEEEEDDVEEEDEEMMDEDEEMESESEGESESETE 194
>tr|Q2UK75|Q2UK75_ASPOR Uncharacterized conserved protein OS=Aspergillus oryzae GN=AO090003000924 PE=4 SV=1 Length = 968
Score = 36.6 bits (83), Expect = 0.64 Identities = 18/63 (28%), Positives = 33/63 (52%) Frame = -2
Query: 307 KDGYDVVPYFMLRTVLEKETEKNDTLEKEDEEEVFHDIPNHPEWGNEADNESTDNSSGNE 128 +D D+ + + T E+E EK + + + E F D + E G+E+D + D+S G+E Sbjct: 177 EDAVDLTTAWDMNTAEEEEAEKRKSSKAKKAAEEFDDDDHSEEGGSESDEDDDDSSFGDE 236
Query: 127 ETI 119 + Sbjct: 237 SEL 239
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