BP919230 |
Clone id |
YMU001_000122_F11 |
Library |
YMU01 |
Length |
582 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000122_F11. |
Accession |
BP919230 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GAGCCCAATGGCATGTAGATTTGAAGAGCAGAAAGATAGGGCACATAGTACTGCACTGTA GTCTCCCCGCCCGGTAATTTCAAAGGCACCCCTGCCCCATATGCACTCCATTCATCAAAC GAATGCCACAGATCGCCCAAGCTGAAAAAAGGAATGCTCTCTCCATGCGATTTCCACTGC TCTCCTACAGTCTCTGAAATCCCACTCTTGGGTTGGTACTGGCATATCACTGATGGGGTG GTGTATTCCAAAATGCAATCCAAGTTTGACCCACCTGGCCTTGAGCCATTTATTATGCAA GTGGGTATGAGCACATGTTTGCACATCATGGTGTCTGTGGAAATTGCTTCCCTATGCTTG TACTCATTCTCCCTCTGCCCTCTTGTCAGCTGCCTCATAGAGCAAGACATTTGCTTACAT TTATCTATCATCCTCCTCCTTAGTTAATCAAAACCTCTTTTGCAGGAAATCTTTTCTTAC ATGAAAGCGAAACCTTTTCTTACTTGAAAGCGAAACCTTGACCTGTATATGTGTGTATGT GTGAATGTGAGCTCACTTTCTCTCGCGAGCGCACTGTCTCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P14230 |
Definition |
sp|P14230|MTSM_SERMA Modification methylase SmaI OS=Serratia marcescens |
Align length |
44 |
Score (bit) |
33.5 |
E-value |
0.76 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7Q8K6 |
Definition |
tr|A7Q8K6|A7Q8K6_VITVI Chromosome chr5 scaffold_64, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
125 |
Score (bit) |
104.0 |
E-value |
3.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919230|Adiantum capillus-veneris mRNA, clone: YMU001_000122_F11. (569 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7Q8K6|A7Q8K6_VITVI Chromosome chr5 scaffold_64, whole genome... 104 3e-21 tr|A9RPR0|A9RPR0_PHYPA Predicted protein OS=Physcomitrella paten... 100 1e-19 tr|A9TPL8|A9TPL8_PHYPA Predicted protein OS=Physcomitrella paten... 97 6e-19 tr|A9RZ13|A9RZ13_PHYPA Predicted protein OS=Physcomitrella paten... 97 8e-19 tr|A9RSK0|A9RSK0_PHYPA Predicted protein OS=Physcomitrella paten... 95 2e-18 tr|A7PXD4|A7PXD4_VITVI Chromosome chr12 scaffold_36, whole genom... 94 4e-18 tr|B4FEX2|B4FEX2_MAIZE Putative uncharacterized protein OS=Zea m... 94 5e-18 tr|Q6YSZ2|Q6YSZ2_ORYSJ Os07g0246600 protein OS=Oryza sativa subs... 91 6e-17 tr|A7Q9Q2|A7Q9Q2_VITVI Chromosome chr5 scaffold_67, whole genome... 90 8e-17 tr|Q9M0J2|Q9M0J2_ARATH Putative uncharacterized protein AT4g2815... 90 1e-16 tr|Q8L9D1|Q8L9D1_ARATH Putative uncharacterized protein OS=Arabi... 90 1e-16 tr|Q8GUN3|Q8GUN3_ARATH Putative uncharacterized protein At4g2815... 90 1e-16 tr|A9P9W8|A9P9W8_POPTR Putative uncharacterized protein OS=Popul... 89 1e-16 tr|Q9ZT70|Q9ZT70_ARATH Putative uncharacterized protein AT4g0342... 89 2e-16 tr|Q8S9K9|Q8S9K9_ARATH AT4g03420/F9H3_4 OS=Arabidopsis thaliana ... 89 2e-16 tr|Q850Z6|Q850Z6_ORYSJ Putative uncharacterized protein OSJNBb00... 89 2e-16 tr|Q7Y149|Q7Y149_ORYSJ Putative uncharacterized protein OSJNBa00... 89 2e-16 tr|Q10B37|Q10B37_ORYSJ Os03g0831300 protein OS=Oryza sativa subs... 89 2e-16 tr|B8AMR1|B8AMR1_ORYSI Putative uncharacterized protein OS=Oryza... 89 2e-16 tr|B4FY71|B4FY71_MAIZE Putative uncharacterized protein OS=Zea m... 88 3e-16 tr|B4FYP0|B4FYP0_MAIZE Putative uncharacterized protein OS=Zea m... 88 4e-16 tr|A7PGX7|A7PGX7_VITVI Chromosome chr17 scaffold_16, whole genom... 88 4e-16 tr|Q940I8|Q940I8_ARATH Putative uncharacterized protein Z97340.1... 86 1e-15 tr|Q8LNT2|Q8LNT2_ORYSJ Os10g0494000 protein OS=Oryza sativa subs... 86 1e-15 tr|A2Z8W3|A2Z8W3_ORYSI Putative uncharacterized protein OS=Oryza... 86 1e-15 tr|Q3E9V1|Q3E9V1_ARATH Uncharacterized protein At4g28150.2 (Puta... 85 2e-15 tr|A7P3D3|A7P3D3_VITVI Chromosome chr1 scaffold_5, whole genome ... 85 2e-15 tr|Q9LR63|Q9LR63_ARATH F21B7.22 OS=Arabidopsis thaliana PE=4 SV=1 84 4e-15 tr|Q8RY13|Q8RY13_ARATH At1g03610/F21B7_13 OS=Arabidopsis thalian... 84 4e-15 tr|Q8LF98|Q8LF98_ARATH Putative uncharacterized protein OS=Arabi... 84 4e-15
>tr|A7Q8K6|A7Q8K6_VITVI Chromosome chr5 scaffold_64, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00033091001 PE=4 SV=1 Length = 357
Score = 104 bits (260), Expect = 3e-21 Identities = 59/125 (47%), Positives = 74/125 (59%), Gaps = 2/125 (1%) Frame = -2
Query: 370 RGQRENEYKHREAISTDTMMCKHVLIPTCIINGSRPGGS-NLDCILEYTTPSVICQYQPK 194 R Q + KH+ A ++ TC ++ G S NLD LEYTTP V Q+ PK Sbjct: 4 RQQVQKPLKHKAAAEPESRTELDDCSSTCSVSHQGLGDSTNLDRFLEYTTPVVPAQHFPK 63
Query: 193 SGISETVGEQWKSHG-ESIPFFSLGDLWHSFDEWSAYGAGVPLKLPGGETTVQYYVPYLS 17 + + W++H E P+F LGDLW SF EWSAYGAGVPL L G E+ VQYYVPYLS Sbjct: 64 TSM-----RGWRNHQTEFHPYFILGDLWESFKEWSAYGAGVPLLLNGSESVVQYYVPYLS 118
Query: 16 ALQIY 2 +Q+Y Sbjct: 119 GIQLY 123
>tr|A9RPR0|A9RPR0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_117738 PE=4 SV=1 Length = 400
Score = 99.8 bits (247), Expect = 1e-19 Identities = 52/85 (61%), Positives = 60/85 (70%) Frame = -2
Query: 256 SNLDCILEYTTPSVICQYQPKSGISETVGEQWKSHGESIPFFSLGDLWHSFDEWSAYGAG 77 SNLD LE TTP V PKS + + +W + E P+F+LGDLW SFDEWSAYGAG Sbjct: 96 SNLDRFLEETTPCVKVLTLPKSRLRDP-SNRW-FNPEETPYFNLGDLWDSFDEWSAYGAG 153
Query: 76 VPLKLPGGETTVQYYVPYLSALQIY 2 VPL L G E+ VQYYVPYLSALQ+Y Sbjct: 154 VPLTLNGDESVVQYYVPYLSALQLY 178
>tr|A9TPL8|A9TPL8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_148691 PE=4 SV=1 Length = 337
Score = 97.1 bits (240), Expect = 6e-19 Identities = 52/96 (54%), Positives = 61/96 (63%) Frame = -2
Query: 289 TCIINGSRPGGSNLDCILEYTTPSVICQYQPKSGISETVGEQWKSHGESIPFFSLGDLWH 110 T +G SNLD LE T+P V Q PK IS + + + E P+F+L DLW Sbjct: 23 TACSSGQSSSQSNLDRFLEETSPRVKTQTLPKVVISRAMR---RCNPEVTPYFNLRDLWD 79
Query: 109 SFDEWSAYGAGVPLKLPGGETTVQYYVPYLSALQIY 2 SFDEWSAYG GVPL L G E+ VQYYVPYLSALQ+Y Sbjct: 80 SFDEWSAYGCGVPLMLNGDESAVQYYVPYLSALQLY 115
>tr|A9RZ13|A9RZ13_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_72334 PE=4 SV=1 Length = 276
Score = 96.7 bits (239), Expect = 8e-19 Identities = 51/85 (60%), Positives = 57/85 (67%) Frame = -2
Query: 256 SNLDCILEYTTPSVICQYQPKSGISETVGEQWKSHGESIPFFSLGDLWHSFDEWSAYGAG 77 SNLD LE TTP V QY PK ++ E +F+LGDLW SFDEWSAYGAG Sbjct: 17 SNLDRFLEVTTPRVRTQYLPKRC----------ANPEETLYFNLGDLWDSFDEWSAYGAG 66
Query: 76 VPLKLPGGETTVQYYVPYLSALQIY 2 VPL L G E+ VQYYVPYLSALQ+Y Sbjct: 67 VPLVLNGDESVVQYYVPYLSALQLY 91
>tr|A9RSK0|A9RSK0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_177744 PE=4 SV=1 Length = 341
Score = 95.1 bits (235), Expect = 2e-18 Identities = 49/85 (57%), Positives = 60/85 (70%) Frame = -2
Query: 256 SNLDCILEYTTPSVICQYQPKSGISETVGEQWKSHGESIPFFSLGDLWHSFDEWSAYGAG 77 SN+D LE TTP V Q PKS + ++ ++ + E +F+L DLW SFDEWSAYGAG Sbjct: 21 SNIDRFLEVTTPRVKTQNLPKSYVRDS-SQKRCLNPEKTAYFNLRDLWDSFDEWSAYGAG 79
Query: 76 VPLKLPGGETTVQYYVPYLSALQIY 2 VPL L G E+ VQYYVPYLSALQ+Y Sbjct: 80 VPLVLNGDESVVQYYVPYLSALQLY 104
>tr|A7PXD4|A7PXD4_VITVI Chromosome chr12 scaffold_36, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025995001 PE=4 SV=1 Length = 304
Score = 94.4 bits (233), Expect = 4e-18 Identities = 47/87 (54%), Positives = 60/87 (68%), Gaps = 2/87 (2%) Frame = -2
Query: 256 SNLDCILEYTTPSVICQYQPKSGISE--TVGEQWKSHGESIPFFSLGDLWHSFDEWSAYG 83 SNL+C LE TP V Q+ K+ I + + W+ E + +F+LGDLW+ FDEWSAYG Sbjct: 10 SNLECFLECITPVVQSQFLHKTEIRDLNVLWHPWER--EKVEYFTLGDLWNCFDEWSAYG 67
Query: 82 AGVPLKLPGGETTVQYYVPYLSALQIY 2 AGVP+ L ET VQYYVPYLSA+QI+ Sbjct: 68 AGVPILLNNNETLVQYYVPYLSAIQIF 94
>tr|B4FEX2|B4FEX2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 322
Score = 94.0 bits (232), Expect = 5e-18 Identities = 47/84 (55%), Positives = 56/84 (66%) Frame = -2
Query: 253 NLDCILEYTTPSVICQYQPKSGISETVGEQWKSHGESIPFFSLGDLWHSFDEWSAYGAGV 74 NLD L TTPSV Y PK+ + G + S P+F LGDLW +F EWS YGAGV Sbjct: 119 NLDRFLSSTTPSVPVHYLPKTSMR---GWRMGDVTNSRPYFCLGDLWEAFKEWSFYGAGV 175
Query: 73 PLKLPGGETTVQYYVPYLSALQIY 2 PL L GGE+ +QYYVPYLSA+Q+Y Sbjct: 176 PLVLSGGESVIQYYVPYLSAIQLY 199
>tr|Q6YSZ2|Q6YSZ2_ORYSJ Os07g0246600 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0003K21.26 PE=4 SV=1 Length = 455
Score = 90.5 bits (223), Expect = 6e-17 Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 2/86 (2%) Frame = -2
Query: 253 NLDCILEYTTPSVICQYQPKSGISETVGEQWKSHG--ESIPFFSLGDLWHSFDEWSAYGA 80 NL+ L TTPSV QY PK+ + W+S S P+F LGDLW +F+EWS YGA Sbjct: 151 NLERFLSSTTPSVPVQYLPKTSM-----RGWRSGDAMNSSPYFCLGDLWEAFNEWSFYGA 205
Query: 79 GVPLKLPGGETTVQYYVPYLSALQIY 2 GVP+ L G ++ +QYYVPYLSA+Q+Y Sbjct: 206 GVPVVLNGKDSVIQYYVPYLSAIQLY 231
>tr|A7Q9Q2|A7Q9Q2_VITVI Chromosome chr5 scaffold_67, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00033573001 PE=4 SV=1 Length = 337
Score = 90.1 bits (222), Expect = 8e-17 Identities = 43/86 (50%), Positives = 57/86 (66%), Gaps = 1/86 (1%) Frame = -2
Query: 256 SNLDCILEYTTPSVICQYQPKSGISETVGEQWKSHGES-IPFFSLGDLWHSFDEWSAYGA 80 SNL+C L TP V Q + + + + +W+ G+ I +F+L DLW +DEWSAYG Sbjct: 16 SNLECFLNGVTPIVPSQSLSQDCVQD-LNNRWRLPGQDKIDYFTLADLWDCYDEWSAYGI 74
Query: 79 GVPLKLPGGETTVQYYVPYLSALQIY 2 G+PLKL GGE +QYYVPYLSA+ IY Sbjct: 75 GIPLKLDGGENIMQYYVPYLSAIHIY 100
>tr|Q9M0J2|Q9M0J2_ARATH Putative uncharacterized protein AT4g28150 OS=Arabidopsis thaliana GN=AT4g28150 PE=4 SV=1 Length = 258
Score = 89.7 bits (221), Expect = 1e-16 Identities = 45/85 (52%), Positives = 53/85 (62%) Frame = -2
Query: 256 SNLDCILEYTTPSVICQYQPKSGISETVGEQWKSHGESIPFFSLGDLWHSFDEWSAYGAG 77 SNLD L TTP V PK+ I + +S+ +F LGD W FDEWSAYGAG Sbjct: 25 SNLDRFLRCTTPIVPAYSLPKTQIKNLNPLWYPLESQSVEYFRLGDFWDCFDEWSAYGAG 84
Query: 76 VPLKLPGGETTVQYYVPYLSALQIY 2 VP+ GET VQYYVPYLSA+QI+ Sbjct: 85 VPIVSETGETLVQYYVPYLSAIQIF 109
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