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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919236
Clone id YMU001_000122_G05
Library
Length 335
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000122_G05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGGGCATCTCTGTCGATTAGGGAAGCCGTTGCCTTTCCCCACACAAGTCGCTTGAATTCC
TTATATCTAACAAAAGGATCACTTGCTTTGTCTTCAGGACTTCCATAATGAGCATCATCA
TAGAAACCTCGCCTTTTGTTGAACCGAACACAAATCATCAGTTGCTCCAAAAAACCGAGT
GTCTCCTCATAAATCTATCTGAATCCATGTTGAATCGAACCTTCTATGTTTCTTGTTTTA
CTGCAACCAATCTTTCTTGAGTCGCCCTTGCCAAAAGTAATGGATTGTTTGCCTTCCACT
ACTTTACCGTCGTATCAAGATCCTATGCCGAAATG
■■Homology search results ■■ -
sp_hit_id P75206
Definition sp|P75206|AMPA_MYCPN Probable cytosol aminopeptidase OS=Mycoplasma pneumoniae
Align length 39
Score (bit) 30.0
E-value 3.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919236|Adiantum capillus-veneris mRNA, clone:
YMU001_000122_G05.
         (335 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P75206|AMPA_MYCPN Probable cytosol aminopeptidase OS=Mycoplas...    30   3.8  
sp|Q58EX7|PKHG4_HUMAN Puratrophin-1 OS=Homo sapiens GN=PLEKHG4 P...    30   4.9  
sp|Q6BTV5|SIL1_DEBHA Nucleotide exchange factor SIL1 OS=Debaryom...    29   6.4  
sp|Q9BY84|DUS16_HUMAN Dual specificity protein phosphatase 16 OS...    29   8.4  

>sp|P75206|AMPA_MYCPN Probable cytosol aminopeptidase OS=Mycoplasma
           pneumoniae GN=pepA PE=3 SV=1
          Length = 445

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -1

Query: 314 YDGKVVEGKQSITFGKGDSRKIGCSKTRNIEGSIQHGFR 198
           +D K V  K+S  +GK D     C KT+ +EG I+ G +
Sbjct: 7   FDSKTVVFKKSDKYGKSD-----CCKTKCVEGQIEFGVK 40


>sp|Q58EX7|PKHG4_HUMAN Puratrophin-1 OS=Homo sapiens GN=PLEKHG4 PE=1
           SV=1
          Length = 1191

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 18/54 (33%), Positives = 30/54 (55%)
 Frame = +3

Query: 45  KSLEFLISNKRITCFVFRTSIMSIIIETSPFVEPNTNHQLLQKTECLLINLSES 206
           + LE L+ N +  C + + +I S+     P +EP    QLLQ+TE L+  + +S
Sbjct: 335 RRLEALLQNCQAACALLQGAIESVKAVPQP-MEPGEVGQLLQQTEVLMQQVLDS 387


>sp|Q6BTV5|SIL1_DEBHA Nucleotide exchange factor SIL1
           OS=Debaryomyces hansenii GN=SIL1 PE=3 SV=2
          Length = 427

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 22/59 (37%), Positives = 33/59 (55%)
 Frame = -1

Query: 188 EETLGFLEQLMICVRFNKRRGFYDDAHYGSPEDKASDPFVRYKEFKRLVWGKATASLID 12
           EET G  E LM+    N   G  D++H  + ED+A++   + KEFK+   GK+  S +D
Sbjct: 85  EETEGSSE-LMVNAEQNNDNG--DNSHQMTNEDQANEIQQKIKEFKQ-TQGKSKVSTVD 139


>sp|Q9BY84|DUS16_HUMAN Dual specificity protein phosphatase 16
           OS=Homo sapiens GN=DUSP16 PE=1 SV=1
          Length = 665

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = +3

Query: 42  HKSLEFLISNKRITCFVFRTSIMSIIIETSPFVEPNTNHQLLQKTECLLINLSESMLNR 218
           H+ +   I  +R+   +   +   ++I++ PFVE NT+H L    E + IN S+ M  R
Sbjct: 3   HEMIGTQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHIL----EAININCSKLMKRR 57
tr_hit_id B0WR31
Definition tr|B0WR31|B0WR31_CULQU Helicase sen1 OS=Culex quinquefasciatus
Align length 55
Score (bit) 33.9
E-value 4.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919236|Adiantum capillus-veneris mRNA, clone:
YMU001_000122_G05.
         (335 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B0WR31|B0WR31_CULQU Helicase sen1 OS=Culex quinquefasciatus G...    34   4.2  
tr|Q2KBS4|Q2KBS4_RHIEC Probable dioxygenase protein OS=Rhizobium...    33   5.5  
tr|Q1MKP5|Q1MKP5_RHIL3 Putative ring hydroxylating dioxygenase s...    33   5.5  
tr|B0IYI7|B0IYI7_RHILT Rieske (2Fe-2S) domain protein OS=Rhizobi...    33   5.5  
tr|O77320|O77320_PLAF7 Putative uncharacterized protein MAL3P3.3...    33   5.5  
tr|B4KUC8|B4KUC8_DROMO GI18405 OS=Drosophila mojavensis GN=GI184...    33   7.2  
tr|A6RK50|A6RK50_BOTFB Predicted protein OS=Botryotinia fuckelia...    33   9.4  

>tr|B0WR31|B0WR31_CULQU Helicase sen1 OS=Culex quinquefasciatus
           GN=CpipJ_CPIJ009255 PE=4 SV=1
          Length = 682

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +3

Query: 135 FVEPNTNHQLLQKTECLLINLSESMLNRTFYVSCFTATNLS*VALAKSNGLFAFH 299
           F   + NHQ +   + +LI ++E  + + F V+    T    V  A  NGL  FH
Sbjct: 11  FTVESNNHQSINNKDYVLIYMTEKTIGKQFRVAAVVTTRRQQVQYAAENGLKFFH 65


>tr|Q2KBS4|Q2KBS4_RHIEC Probable dioxygenase protein OS=Rhizobium
           etli (strain CFN 42 / ATCC 51251) GN=RHE_CH00901 PE=4
           SV=1
          Length = 414

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +2

Query: 2   GHLCRLGKP-LPFPTQVA*IPYI*QKDHLLCLQDFHNEHHHRNLAFC*TEHKSSV 163
           GH C L KP   F  Q+   P +  +     ++ FHN   HR    C  EH SSV
Sbjct: 47  GHDCELPKPGAYFTVQIGTYPVVIVRGRDNVIRAFHNSCRHRGSRVCTKEHGSSV 101


>tr|Q1MKP5|Q1MKP5_RHIL3 Putative ring hydroxylating dioxygenase
           subunit OS=Rhizobium leguminosarum bv. viciae (strain
           3841) GN=RL0962 PE=4 SV=1
          Length = 420

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +2

Query: 2   GHLCRLGKP-LPFPTQVA*IPYI*QKDHLLCLQDFHNEHHHRNLAFC*TEHKSSV 163
           GH C L KP   F  Q+   P +  +     ++ FHN   HR    C  EH SSV
Sbjct: 53  GHDCELPKPGAYFTVQIGSYPVVIVRGRDNVIRAFHNSCRHRGSRVCTKEHGSSV 107


>tr|B0IYI7|B0IYI7_RHILT Rieske (2Fe-2S) domain protein OS=Rhizobium
           leguminosarum bv. trifolii WSM1325 GN=RlegDRAFT_3255
           PE=4 SV=1
          Length = 420

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +2

Query: 2   GHLCRLGKP-LPFPTQVA*IPYI*QKDHLLCLQDFHNEHHHRNLAFC*TEHKSSV 163
           GH C L KP   F  Q+   P +  +     ++ FHN   HR    C  EH SSV
Sbjct: 53  GHDCELPKPGAYFTVQIGSYPVVIVRGRDNVIRAFHNSCRHRGSRVCTKEHGSSV 107


>tr|O77320|O77320_PLAF7 Putative uncharacterized protein MAL3P3.3
           OS=Plasmodium falciparum (isolate 3D7) GN=MAL3P3.3 PE=4
           SV=1
          Length = 3724

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +3

Query: 15  D*GSRCLSPHKSLEFLISNKRITCFVFRTSIMSIIIETSPFVEPNTNHQLLQKTECL 185
           D G   L P    E L++NK+   ++ R  I+  + + +P   P+  +Q L K +CL
Sbjct: 242 DDGDNSLIPKNLFENLLNNKQHNDYLQRNIILMDVNDINPLEHPDEQNQSLNKNKCL 298


>tr|B4KUC8|B4KUC8_DROMO GI18405 OS=Drosophila mojavensis GN=GI18405
            PE=4 SV=1
          Length = 1080

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = +3

Query: 84   CFVFRTSIMSIIIETSPFVEPNTNHQLLQKTECLLINLSESMLNRTFYVSCFTA 245
            C VFRT +   +  T+P       +Q +  T C  +NLS  M  RT YVS   A
Sbjct: 945  CIVFRT-LPPAMCSTTPM------YQFIVNTHCHFVNLSHRMQGRTVYVSVLKA 991


>tr|A6RK50|A6RK50_BOTFB Predicted protein OS=Botryotinia fuckeliana
           (strain B05.10) GN=BC1G_00821 PE=4 SV=1
          Length = 102

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 19/60 (31%), Positives = 30/60 (50%)
 Frame = +2

Query: 77  DHLLCLQDFHNEHHHRNLAFC*TEHKSSVAPKNRVSPHKSI*IHVESNLLCFLFYCNQSF 256
           D  L L DF ++H+H+    C       +APK+ ++P           LL + +YCNQS+
Sbjct: 19  DQSLLLSDFISQHYHKIDTHC-------IAPKSDITP----------LLLSYHYYCNQSW 61