BP919237 |
Clone id |
YMU001_000122_G06 |
Library |
YMU01 |
Length |
543 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000122_G06. |
Accession |
BP919237 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ACTTCATCGATTATAATGTGCGTTATCCCAGAAACACCTTCTCTTCCCTGAAGCCTCCTC AATAAGATCCCAGTTGTGCAATACAAAATACTGCCCCGAGGTCTAGGTGGAACACTTTCG AGCCTGATTGAATAACCAACACTCTTTCCAAGCAATTCACCTCTTTCCCATGCAACACAC TCGGCAACACTAATGGCAGCAATCCTCCTTGGCTGTGTGACAACAATGCGAACCTCTGCA CCAGTTCCATTCAGCTCATGGTCCTCTAGAACAAACTGTGGGACCTGAGTTGTTTTGCCT GATCCTGTTCCACCTGTTAAGACAATTACTTGATTCTTGGCTATCATATCCACAATCTTT TGTCTCTGCCTCCATAATGGTAGGGATTGGCGTACTTGCCGTTGCTCTGTGAGCAATGAA GAAGACAACCTGTTTCTTGCTTCCTGGCACAATGCAGCACTTTCTGCATTGAGGTACTCT CTATTACTATAGCATGAAGGTAAATTAAACACCTCTTTTTGTAGAAGTAAATCCTGTGCT TCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6P158 |
Definition |
sp|Q6P158|DHX57_HUMAN Putative ATP-dependent RNA helicase DHX57 OS=Homo sapiens |
Align length |
158 |
Score (bit) |
154.0 |
E-value |
3.0e-37 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TE50 |
Definition |
tr|A9TE50|A9TE50_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
193 |
Score (bit) |
207.0 |
E-value |
4.0e-52 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919237|Adiantum capillus-veneris mRNA, clone: YMU001_000122_G06. (543 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TE50|A9TE50_PHYPA Predicted protein OS=Physcomitrella paten... 207 4e-52 tr|B6MTK9|B6MTK9_BRAFL Putative uncharacterized protein OS=Branc... 159 7e-38 tr|B4DKW2|B4DKW2_HUMAN cDNA FLJ56001, highly similar to Putative... 154 4e-36 tr|B6NCG0|B6NCG0_BRAFL Putative uncharacterized protein OS=Branc... 153 5e-36 tr|B7Q4B1|B7Q4B1_IXOSC ATP-dependent RNA helicase, putative OS=I... 151 2e-35 tr|Q6PJK6|Q6PJK6_HUMAN DHX9 protein (Fragment) OS=Homo sapiens G... 150 4e-35 tr|Q58F26|Q58F26_HUMAN DHX9 protein (Fragment) OS=Homo sapiens G... 150 4e-35 tr|Q05CI5|Q05CI5_HUMAN DHX9 protein (Fragment) OS=Homo sapiens G... 150 4e-35 tr|B2RNV4|B2RNV4_HUMAN DEAH (Asp-Glu-Ala-His) box polypeptide 9 ... 150 4e-35 tr|Q4P296|Q4P296_USTMA Putative uncharacterized protein OS=Ustil... 150 5e-35 tr|B7ZDA0|B7ZDA0_DANRE Novel protein similar to vertebrate DEAH ... 149 1e-34 tr|A5JPM0|A5JPM0_BOMMO MLE protein OS=Bombyx mori PE=2 SV=1 148 2e-34 tr|Q3UR42|Q3UR42_MOUSE Putative uncharacterized protein (Fragmen... 148 2e-34 tr|Q7Q577|Q7Q577_ANOGA AGAP006599-PA OS=Anopheles gambiae GN=AGA... 148 2e-34 tr|Q5C383|Q5C383_SCHJA SJCHGC05105 protein (Fragment) OS=Schisto... 147 4e-34 tr|B4G736|B4G736_DROPE GL19591 OS=Drosophila persimilis GN=GL195... 146 6e-34 tr|Q0IFJ1|Q0IFJ1_AEDAE ATP-dependent RNA helicase (Fragment) OS=... 146 8e-34 tr|O77403|O77403_9DIPT Maleless protein OS=Sciara ocellaris GN=m... 145 1e-33 tr|Q29LX1|Q29LX1_DROPS GA21700 OS=Drosophila pseudoobscura pseud... 145 1e-33 tr|B2GUM4|B2GUM4_XENTR Putative uncharacterized protein OS=Xenop... 145 2e-33 tr|B7PZF0|B7PZF0_IXOSC ATP-dependent RNA helicase, putative OS=I... 144 2e-33 tr|Q4TB22|Q4TB22_TETNG Chromosome 15 SCAF7210, whole genome shot... 144 4e-33 tr|A7SKC5|A7SKC5_NEMVE Predicted protein OS=Nematostella vectens... 142 9e-33 tr|Q4T4A4|Q4T4A4_TETNG Chromosome undetermined SCAF9761, whole g... 142 1e-32 tr|B0S6Z1|B0S6Z1_DANRE Novel protein similar to vertebrate DEAH ... 142 1e-32 tr|Q4RHK0|Q4RHK0_TETNG Chromosome 19 SCAF15045, whole genome sho... 142 1e-32 tr|B3MJ84|B3MJ84_DROAN GF13828 OS=Drosophila ananassae GN=GF1382... 142 1e-32 tr|Q8W302|Q8W302_ORYSA Putative helicase OS=Oryza sativa GN=OSJN... 141 2e-32 tr|Q10CV6|Q10CV6_ORYSJ Helicase associated domain family protein... 141 2e-32 tr|Q0DNK2|Q0DNK2_ORYSJ Os03g0748800 protein OS=Oryza sativa subs... 141 2e-32
>tr|A9TE50|A9TE50_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_91582 PE=4 SV=1 Length = 1152
Score = 207 bits (526), Expect = 4e-52 Identities = 114/193 (59%), Positives = 131/193 (67%), Gaps = 33/193 (17%) Frame = -2
Query: 482 REYLNAESAALCQEARNRLSSSLLTEQRQVRQSLPLWRQRQKIVDMIAKNQVIVLTGGTG 303 +E L E+A L EAR R S EQR+VRQSLP WR+RQKIV ++ ++V+VLTG TG Sbjct: 294 KEQLGTENAILRLEARKRSVSPEFAEQRRVRQSLPAWRERQKIVGFVSNHRVVVLTGETG 353
Query: 302 SGKTTQ---------------------------------VPQFVLEDHELNGTGAEVRIV 222 GKTTQ VPQ+VLED EL G+GAEV IV Sbjct: 354 CGKTTQICMHKPLGRNLAVILSDIMTFTLTGRAYSCASRVPQYVLEDAELQGSGAEVHIV 413
Query: 221 VTQPRRIAAISVAECVAWERGELLGKSVGYSIRLESVPPRPRGSILYCTTGILLRRLQGR 42 VTQPRRIAAISVAE VAWERGE LGKSVGY+IRLES PPRPRGSILYCTTGILL RLQ Sbjct: 414 VTQPRRIAAISVAERVAWERGETLGKSVGYAIRLESSPPRPRGSILYCTTGILLHRLQRA 473
Query: 41 EGVSGITHIIIDE 3 +G+ G++H+IIDE Sbjct: 474 DGLVGVSHVIIDE 486
>tr|B6MTK9|B6MTK9_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_124637 PE=4 SV=1 Length = 1237
Score = 159 bits (403), Expect = 7e-38 Identities = 80/166 (48%), Positives = 113/166 (68%) Frame = -2
Query: 500 PSCYSNREYLNAESAALCQEARNRLSSSLLTEQRQVRQSLPLWRQRQKIVDMIAKNQVIV 321 P + E LN + Q+ RN+ L + Q RQ+LP+W +++ I N V++ Sbjct: 312 PLAHMTLEQLNHDLLNQLQDQRNQ--DQTLQKMLQDRQALPIWESVDHVMNAIVNNSVVI 369
Query: 320 LTGGTGSGKTTQVPQFVLEDHELNGTGAEVRIVVTQPRRIAAISVAECVAWERGELLGKS 141 + G TG GKTTQVPQ++L+D + G GAE I+VTQPRRI+A+SVAE VA ERGE LG S Sbjct: 370 IKGETGCGKTTQVPQYILDDMIMKGKGAECNIIVTQPRRISAVSVAERVAQERGEDLGLS 429
Query: 140 VGYSIRLESVPPRPRGSILYCTTGILLRRLQGREGVSGITHIIIDE 3 GYS+R ++V PRP G IL+CT G+LLR+++G G+ G++H+I+DE Sbjct: 430 TGYSVRFDTVFPRPYGGILFCTVGVLLRKMEG--GMRGLSHLIVDE 473
>tr|B4DKW2|B4DKW2_HUMAN cDNA FLJ56001, highly similar to Putative ATP-dependent RNA helicase DHX57 (EC 3.6.1.-) (Fragment) OS=Homo sapiens PE=2 SV=1 Length = 932
Score = 154 bits (388), Expect = 4e-36 Identities = 81/158 (51%), Positives = 114/158 (72%), Gaps = 1/158 (0%) Frame = -2
Query: 473 LNAESAALCQEARNRLSSSLLTEQRQVRQSLPLWRQRQKIVDMIAKNQVIVLTGGTGSGK 294 ++AE+ +C++ R + +S Q RQSLP W +R+ I++++ K+QV+V++G TG GK Sbjct: 514 VHAENGKICKQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGK 573
Query: 293 TTQVPQFVLEDHELNGTGAEV-RIVVTQPRRIAAISVAECVAWERGELLGKSVGYSIRLE 117 TTQ+PQF+L+D LNG +V I+ TQPRRI+AISVAE VA ER E +G +VGY IRLE Sbjct: 574 TTQIPQFILDD-SLNGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLE 632
Query: 116 SVPPRPRGSILYCTTGILLRRLQGREGVSGITHIIIDE 3 SV +LYCTTG+LLRRL+G + G++HII+DE Sbjct: 633 SVKSSAT-RLLYCTTGVLLRRLEGDTALQGVSHIIVDE 669
>tr|B6NCG0|B6NCG0_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_115470 PE=4 SV=1 Length = 1244
Score = 153 bits (387), Expect = 5e-36 Identities = 71/130 (54%), Positives = 100/130 (76%) Frame = -2
Query: 392 RQSLPLWRQRQKIVDMIAKNQVIVLTGGTGSGKTTQVPQFVLEDHELNGTGAEVRIVVTQ 213 RQ+LP+W ++++ I N V+++ G TG GKTTQVPQ++L+D + G GAE I+VTQ Sbjct: 354 RQALPIWESVDQVMNAIVNNSVVIIKGETGCGKTTQVPQYILDDMIMKGKGAECNIIVTQ 413
Query: 212 PRRIAAISVAECVAWERGELLGKSVGYSIRLESVPPRPRGSILYCTTGILLRRLQGREGV 33 PRRI+A+SVAE VA ERGE LG S GYS+R ++V PRP G IL+CT G+LLR+++G G+ Sbjct: 414 PRRISAVSVAERVAQERGEDLGLSTGYSVRFDTVFPRPYGGILFCTVGVLLRKMEG--GM 471
Query: 32 SGITHIIIDE 3 G++H+I+DE Sbjct: 472 RGLSHLIVDE 481
>tr|B7Q4B1|B7Q4B1_IXOSC ATP-dependent RNA helicase, putative OS=Ixodes scapularis GN=IscW_ISCW010381 PE=4 SV=1 Length = 1019
Score = 151 bits (381), Expect = 2e-35 Identities = 80/148 (54%), Positives = 105/148 (70%) Frame = -2
Query: 446 QEARNRLSSSLLTEQRQVRQSLPLWRQRQKIVDMIAKNQVIVLTGGTGSGKTTQVPQFVL 267 +EA + +SS+ VR+SLP++ R++IV I N+V+VLTG TGSGKTTQVPQF+ Sbjct: 212 EEASSESNSSM----NAVRRSLPIYEYREQIVRTIENNRVVVLTGETGSGKTTQVPQFIF 267
Query: 266 EDHELNGTGAEVRIVVTQPRRIAAISVAECVAWERGELLGKSVGYSIRLESVPPRPRGSI 87 E+ GA +VVTQPRRI+AIS+A VA ERGE LG+SVG+ +RL R RG I Sbjct: 268 EEFISRDEGARCNVVVTQPRRISAISMAARVAKERGEELGESVGFQVRLSKQLLRRRGGI 327
Query: 86 LYCTTGILLRRLQGREGVSGITHIIIDE 3 L+CTTGILLR LQG + GI+H+++DE Sbjct: 328 LFCTTGILLRHLQGNPTLRGISHVLVDE 355
>tr|Q6PJK6|Q6PJK6_HUMAN DHX9 protein (Fragment) OS=Homo sapiens GN=DHX9 PE=2 SV=1 Length = 599
Score = 150 bits (379), Expect = 4e-35 Identities = 73/132 (55%), Positives = 100/132 (75%) Frame = -2
Query: 398 QVRQSLPLWRQRQKIVDMIAKNQVIVLTGGTGSGKTTQVPQFVLEDHELNGTGAEVRIVV 219 Q R+ LP+ + +I++ I++N V+++ G TG GKTTQVPQF+L+D N AE IVV Sbjct: 383 QERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVV 442
Query: 218 TQPRRIAAISVAECVAWERGELLGKSVGYSIRLESVPPRPRGSILYCTTGILLRRLQGRE 39 TQPRRI+A+SVAE VA+ERGE GKS GYS+R ES+ PRP SI++CT G+LLR+L+ Sbjct: 443 TQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEA-- 500
Query: 38 GVSGITHIIIDE 3 G+ GI+H+I+DE Sbjct: 501 GIRGISHVIVDE 512
>tr|Q58F26|Q58F26_HUMAN DHX9 protein (Fragment) OS=Homo sapiens GN=DHX9 PE=2 SV=1 Length = 596
Score = 150 bits (379), Expect = 4e-35 Identities = 73/132 (55%), Positives = 100/132 (75%) Frame = -2
Query: 398 QVRQSLPLWRQRQKIVDMIAKNQVIVLTGGTGSGKTTQVPQFVLEDHELNGTGAEVRIVV 219 Q R+ LP+ + +I++ I++N V+++ G TG GKTTQVPQF+L+D N AE IVV Sbjct: 383 QERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVV 442
Query: 218 TQPRRIAAISVAECVAWERGELLGKSVGYSIRLESVPPRPRGSILYCTTGILLRRLQGRE 39 TQPRRI+A+SVAE VA+ERGE GKS GYS+R ES+ PRP SI++CT G+LLR+L+ Sbjct: 443 TQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEA-- 500
Query: 38 GVSGITHIIIDE 3 G+ GI+H+I+DE Sbjct: 501 GIRGISHVIVDE 512
>tr|Q05CI5|Q05CI5_HUMAN DHX9 protein (Fragment) OS=Homo sapiens GN=DHX9 PE=2 SV=1 Length = 593
Score = 150 bits (379), Expect = 4e-35 Identities = 73/132 (55%), Positives = 100/132 (75%) Frame = -2
Query: 398 QVRQSLPLWRQRQKIVDMIAKNQVIVLTGGTGSGKTTQVPQFVLEDHELNGTGAEVRIVV 219 Q R+ LP+ + +I++ I++N V+++ G TG GKTTQVPQF+L+D N AE IVV Sbjct: 383 QERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVV 442
Query: 218 TQPRRIAAISVAECVAWERGELLGKSVGYSIRLESVPPRPRGSILYCTTGILLRRLQGRE 39 TQPRRI+A+SVAE VA+ERGE GKS GYS+R ES+ PRP SI++CT G+LLR+L+ Sbjct: 443 TQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEA-- 500
Query: 38 GVSGITHIIIDE 3 G+ GI+H+I+DE Sbjct: 501 GIRGISHVIVDE 512
>tr|B2RNV4|B2RNV4_HUMAN DEAH (Asp-Glu-Ala-His) box polypeptide 9 (DEAH (Asp-Glu-Ala-His) box polypeptide 9, isoform CRA_b) OS=Homo sapiens GN=DHX9 PE=2 SV=1 Length = 1270
Score = 150 bits (379), Expect = 4e-35 Identities = 73/132 (55%), Positives = 100/132 (75%) Frame = -2
Query: 398 QVRQSLPLWRQRQKIVDMIAKNQVIVLTGGTGSGKTTQVPQFVLEDHELNGTGAEVRIVV 219 Q R+ LP+ + +I++ I++N V+++ G TG GKTTQVPQF+L+D N AE IVV Sbjct: 383 QERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVV 442
Query: 218 TQPRRIAAISVAECVAWERGELLGKSVGYSIRLESVPPRPRGSILYCTTGILLRRLQGRE 39 TQPRRI+A+SVAE VA+ERGE GKS GYS+R ES+ PRP SI++CT G+LLR+L+ Sbjct: 443 TQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEA-- 500
Query: 38 GVSGITHIIIDE 3 G+ GI+H+I+DE Sbjct: 501 GIRGISHVIVDE 512
>tr|Q4P296|Q4P296_USTMA Putative uncharacterized protein OS=Ustilago maydis GN=UM05767.1 PE=4 SV=1 Length = 1561
Score = 150 bits (378), Expect = 5e-35 Identities = 81/170 (47%), Positives = 106/170 (62%), Gaps = 8/170 (4%) Frame = -2
Query: 488 SNREYLNAESAALCQEARNRLSSSLLTEQRQVRQSLPLWRQRQKIVDMIAKNQVIVLTGG 309 + E L +S L N SS L R R SLP+ +++ ++ + NQV + Sbjct: 445 ATEESLQRKSEQLQLSLANYYSSDALASMRSQRLSLPVSQKQSDVLVKVELNQVTICMAA 504
Query: 308 TGSGKTTQVPQFVLEDHELNGTGAEVRIVVTQPRRIAAISVAECVAWERGELLGKSVGYS 129 TGSGKTTQ+PQ + +D+ L G GA+ IV TQPRRIAAISVAE VA ERGE LG++VGY Sbjct: 505 TGSGKTTQIPQILFDDYILQGKGAKCNIVCTQPRRIAAISVAERVAKERGEKLGQTVGYQ 564
Query: 128 IRLESVPPRPRGSILYCTTGILLRRLQGREG--------VSGITHIIIDE 3 +R E+ PP+P GSI +CTTG+ LRRLQ G + ITH++IDE Sbjct: 565 VRFEAKPPQPDGSITFCTTGVFLRRLQSALGDAESSNTFLDSITHVVIDE 614
|