BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919240|Adiantum capillus-veneris mRNA, clone:
YMU001_000122_G09.
         (516 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q4PIC4|SPT5_USTMA Transcription elongation factor SPT5 OS=Ust...    33   1.0  
sp|P0C6S7|ANS1B_RAT Ankyrin repeat and sterile alpha motif domai...    32   2.3  
sp|Q7ZUX1|RPC3_DANRE DNA-directed RNA polymerase III subunit RPC...    30   5.1  
sp|Q7S133|SWR1_NEUCR Helicase swr-1 OS=Neurospora crassa GN=swr-...    30   6.8  
sp|Q174I2|PRIC1_AEDAE Protein prickle OS=Aedes aegypti GN=pk PE=...    30   8.8  
sp|Q641K5|NUAK1_MOUSE NUAK family SNF1-like kinase 1 OS=Mus musc...    30   8.8  

>sp|Q4PIC4|SPT5_USTMA Transcription elongation factor SPT5
           OS=Ustilago maydis GN=SPT5 PE=3 SV=1
          Length = 1057

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 21/67 (31%), Positives = 31/67 (46%)
 Frame = +1

Query: 277 VIKGDHSSFTGLCHKSHDMAILLLSWLMMRQSSTVGRTVRTACRRGSTVMADSPHGYFLC 456
           V+ G H+  TGL  K  D     LS L M++ S   + +R A   GS V   S +     
Sbjct: 629 VMSGKHADETGLVVKVEDNVTTFLSDLSMQEVSVFSKDIRQAAEVGSGVNVISGYELHNL 688

Query: 457 LYVDTQS 477
           + +D Q+
Sbjct: 689 VQLDAQT 695


>sp|P0C6S7|ANS1B_RAT Ankyrin repeat and sterile alpha motif
           domain-containing protein 1B OS=Rattus norvegicus
           GN=Anks1b PE=1 SV=1
          Length = 1260

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = -1

Query: 309 PRKRRVITLDYTFQNRHSSRETVATNTMQTCSS--SSIPVSTPTRGTQHRGCRNQGS 145
           P++R  I     FQ  + ++E    +T   C+S  SS PVS PT   +    +N+G+
Sbjct: 527 PKQRTSIVSSLDFQRMNHNQEYFEISTSTGCTSFTSSPPVSPPTSSVETTEIKNEGA 583


>sp|Q7ZUX1|RPC3_DANRE DNA-directed RNA polymerase III subunit RPC3
           OS=Danio rerio GN=polr3c PE=2 SV=1
          Length = 539

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = -2

Query: 308 PVKEE*SPLITLFKIDIAQEKQ*PLTPCKHAHHHPYQSVHLHVVHNIEDAEIKVQH 141
           P KE    L TL   ++ Q ++ P TP     H P ++ +L+ V+ +  A + +QH
Sbjct: 392 PAKEAKEMLYTLLSENLVQLQEIPKTP----DHAPSRTFYLYAVNQLPTARLLLQH 443


>sp|Q7S133|SWR1_NEUCR Helicase swr-1 OS=Neurospora crassa GN=swr-1
           PE=3 SV=1
          Length = 1845

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -1

Query: 264 RHSSRETVATNTMQTCSSSSIPVSTPTRGT 175
           RH S+ETVA   MQ+ S +  P +T T+ T
Sbjct: 874 RHDSQETVAATDMQSQSQTQSPKTTDTKPT 903


>sp|Q174I2|PRIC1_AEDAE Protein prickle OS=Aedes aegypti GN=pk PE=3
           SV=1
          Length = 916

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 16/75 (21%), Positives = 30/75 (40%)
 Frame = -1

Query: 390 SPSNRRRLPHHQPAEQQDCHVMTFVA*PRKRRVITLDYTFQNRHSSRETVATNTMQTCSS 211
           SP + R  PH  PA+     + T ++ P         Y+    +  +    +      SS
Sbjct: 507 SPISERSTPHSSPAKHSHTEMSTNISSPVPTEFNDQTYSVSADNDVQTYTGSGATSPISS 566

Query: 210 SSIPVSTPTRGTQHR 166
            ++P + P+  T H+
Sbjct: 567 RTLPCTEPSDQTDHQ 581


>sp|Q641K5|NUAK1_MOUSE NUAK family SNF1-like kinase 1 OS=Mus
           musculus GN=Nuak1 PE=2 SV=1
          Length = 658

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -1

Query: 279 YTFQNRHSSRETVATNTMQTCSSSSIPVSTPTRGTQHR-GCRNQGSTFHIEPY 124
           Y+   R  S E + +N +      S P   P RGT H   CR +G   H   Y
Sbjct: 480 YSSPERSESSELLDSNDVVISGGLSSPPPDPARGTSHSLSCRRKGILKHSSRY 532

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919240|Adiantum capillus-veneris mRNA, clone:
YMU001_000122_G09.
         (516 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4JJ16|B4JJ16_DROGR GH12930 OS=Drosophila grimshawi GN=GH1293...    35   2.9  
tr|Q76DI3|Q76DI3_SOLLC EIN3-like protein OS=Solanum lycopersicum...    34   5.0  
tr|A4ZHH8|A4ZHH8_9HEPC Genome polyprotein OS=Hepatitis C virus s...    33   6.5  

>tr|B4JJ16|B4JJ16_DROGR GH12930 OS=Drosophila grimshawi GN=GH12930
           PE=4 SV=1
          Length = 2099

 Score = 34.7 bits (78), Expect = 2.9
 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
 Frame = -2

Query: 236 LTPCKHAH-----HHPYQ-SVHLHVVHNIEDAEIKVQHFTLNPT 123
           LTP +H H     HHP+Q S H H+  + + ++ ++ HFT NP+
Sbjct: 48  LTPQQHQHSLPSSHHPHQHSQHSHLRSSQQHSQQQLSHFTFNPS 91


>tr|Q76DI3|Q76DI3_SOLLC EIN3-like protein OS=Solanum lycopersicum
           GN=LeEIL4 PE=2 SV=1
          Length = 605

 Score = 33.9 bits (76), Expect = 5.0
 Identities = 34/116 (29%), Positives = 46/116 (39%), Gaps = 1/116 (0%)
 Frame = -1

Query: 372 RLPHHQPAEQQDCHVMTFVA*PRKRRVIT-LDYTFQNRHSSRETVATNTMQTCSSSSIPV 196
           R    QP +QQ          P K  +IT LD+T + + S+ +TV    + TC     P 
Sbjct: 356 RFNERQPLQQQSH--------PIKDEIITSLDFTRKRKQSNEQTVTMAQIYTCEILQCPY 407

Query: 195 STPTRGTQHRGCRNQGSTFHIEPYILVLDKTS*FNVSH*THLDVSDAI*EHCY*PS 28
           S    G Q R  R+      + PY      TS F VS     +V   +    Y PS
Sbjct: 408 SELRHGFQDRSARDNHQL--VCPY----RNTSQFGVSKFPMNEVKPVVLPQQYIPS 457


>tr|A4ZHH8|A4ZHH8_9HEPC Genome polyprotein OS=Hepatitis C virus
            subtype 6m PE=4 SV=1
          Length = 3016

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
 Frame = -1

Query: 405  ARCSYSPS--NRRRLPHHQPAEQQDCHV----MTFVA*PRKRRVITLDYTFQNRHSSRET 244
            AR  Y+P      R P ++P +   C +     T V  PRKR+V+ LD          ++
Sbjct: 2292 ARPDYNPPLLETWRAPDYEPPQVHGCALPPPGSTPVPPPRKRKVVQLD----------QS 2341

Query: 243  VATNTMQTCSSSSIPVSTPTRGTQHRGCRN 154
              T  +   +  + P S+P    Q  GC N
Sbjct: 2342 TVTLALAQLAEKTFPASSPPSTDQDSGCPN 2371