| BP919243 |
| Clone id |
YMU001_000122_G12 |
| Library |
YMU01 |
| Length |
349 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000122_G12. |
| Accession |
BP919243 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
GTTGATGAGATAGAGAATCAGCTTCGAGAAGTCAAGGCTGACAGGCGAGAGAGTGAGCGA
GATGCAAGGCTGTCAGAAGCGGTAGAAAGTTTAAAGCGTCTCTTTCCTGGTGTACATGGG
CGGATGACGGATCTTTGTCGGCCAATACAGAAGAAGTATAACCTTGCTGTCACTGTAGCT
ATGGGAAAGTTTATGGATGCTGTTGTTGTTGAGGATGAACACACAGGCAAGGAATGTATC
AAGTATTTGAAGGAACAACGTCTGCCCCCTCAAACTTTTATTCCTCTTCAATCAGCTCGA
GTAAAACCCATTCACGAGAAATTGCGCACTCTTGGAGGCACTGCCAAGT |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q9Z1M9 |
| Definition |
sp|Q9Z1M9|SMC1A_RAT Structural maintenance of chromosomes protein 1A OS=Rattus norvegicus |
| Align length |
114 |
| Score (bit) |
128.0 |
| E-value |
1.0e-29 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919243|Adiantum capillus-veneris mRNA, clone:
YMU001_000122_G12.
(349 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9Z1M9|SMC1A_RAT Structural maintenance of chromosomes protei... 128 1e-29
sp|Q9CU62|SMC1A_MOUSE Structural maintenance of chromosomes prot... 128 1e-29
sp|Q14683|SMC1A_HUMAN Structural maintenance of chromosomes prot... 128 1e-29
sp|O97593|SMC1A_BOVIN Structural maintenance of chromosomes prot... 128 1e-29
sp|O93308|SMC1A_XENLA Structural maintenance of chromosomes prot... 127 2e-29
sp|O94383|SMC1_SCHPO Structural maintenance of chromosomes prote... 107 1e-23
sp|Q8NDV3|SMC1B_HUMAN Structural maintenance of chromosomes prot... 107 2e-23
sp|Q920F6|SMC1B_MOUSE Structural maintenance of chromosomes prot... 105 7e-23
sp|P32908|SMC1_YEAST Structural maintenance of chromosomes prote... 84 2e-16
sp|P50532|SMC4_XENLA Structural maintenance of chromosomes prote... 51 2e-06
sp|Q54LV0|SMC4_DICDI Structural maintenance of chromosomes prote... 48 2e-05
sp|Q552D9|SMC3_DICDI Structural maintenance of chromosome protei... 47 3e-05
sp|P51834|SMC_BACSU Chromosome partition protein smc OS=Bacillus... 46 7e-05
sp|Q8CG47|SMC4_MOUSE Structural maintenance of chromosomes prote... 45 9e-05
sp|Q9ERA5|SMC4_MICAR Structural maintenance of chromosomes prote... 45 9e-05
sp|Q9NTJ3|SMC4_HUMAN Structural maintenance of chromosomes prote... 45 1e-04
sp|Q00737|SUDA_EMENI Chromosome segregation protein sudA OS=Emer... 42 0.001
sp|P41508|P115_MYCHR Protein P115 OS=Mycoplasma hyorhinis PE=1 SV=2 41 0.002
sp|Q9FJL0|SMC4_ARATH Structural maintenance of chromosomes prote... 40 0.004
sp|P41004|SMC4_SCHPO Structural maintenance of chromosomes prote... 40 0.005
sp|Q59037|SMC_METJA Chromosome partition protein smc homolog OS=... 37 0.030
sp|Q12267|SMC4_YEAST Structural maintenance of chromosomes prote... 37 0.030
sp|Q20060|SMC4_CAEEL Structural maintenance of chromosomes prote... 36 0.067
sp|P42211|ASPRX_ORYSJ Aspartic proteinase OS=Oryza sativa subsp.... 34 0.20
sp|P48996|DPY27_CAEEL Chromosome condensation protein dpy-27 OS=... 33 0.44
sp|A5IB64|Y632_LEGPC UPF0234 protein LPC_0632 OS=Legionella pneu... 32 0.75
sp|Q5WXC3|Y1175_LEGPL UPF0234 protein lpl1175 OS=Legionella pneu... 32 0.75
sp|Q5X601|Y1169_LEGPA UPF0234 protein lpp1169 OS=Legionella pneu... 32 0.75
sp|Q5HTW1|HLDE_CAMJR Bifunctional protein hldE OS=Campylobacter ... 31 1.7
sp|A1W0D6|HLDE_CAMJJ Bifunctional protein hldE OS=Campylobacter ... 31 1.7
>sp|Q9Z1M9|SMC1A_RAT Structural maintenance of chromosomes protein
1A OS=Rattus norvegicus GN=Smc1a PE=1 SV=1
Length = 1233
Score = 128 bits (321), Expect = 1e-29
Identities = 60/114 (52%), Positives = 85/114 (74%), Gaps = 1/114 (0%)
Frame = +1
Query: 1 VDEIENQLREVKADRRESERDARLSEAVESLKRLFPG-VHGRMTDLCRPIQKKYNLAVTV 177
++++ QL + + DR+ES R R +E +ES+KRL+PG V+GR+ DLC+P QKKY +AVT
Sbjct: 477 LNQVMEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTK 536
Query: 178 AMGKFMDAVVVEDEHTGKECIKYLKEQRLPPQTFIPLQSARVKPIHEKLRTLGG 339
+GK MDA++V+ E TG++CI+Y+KEQR P+TF+PL VKP EKLR L G
Sbjct: 537 VLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKG 590
>sp|Q9CU62|SMC1A_MOUSE Structural maintenance of chromosomes protein
1A OS=Mus musculus GN=Smc1a PE=1 SV=3
Length = 1233
Score = 128 bits (321), Expect = 1e-29
Identities = 60/114 (52%), Positives = 85/114 (74%), Gaps = 1/114 (0%)
Frame = +1
Query: 1 VDEIENQLREVKADRRESERDARLSEAVESLKRLFPG-VHGRMTDLCRPIQKKYNLAVTV 177
++++ QL + + DR+ES R R +E +ES+KRL+PG V+GR+ DLC+P QKKY +AVT
Sbjct: 477 LNQVMEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTK 536
Query: 178 AMGKFMDAVVVEDEHTGKECIKYLKEQRLPPQTFIPLQSARVKPIHEKLRTLGG 339
+GK MDA++V+ E TG++CI+Y+KEQR P+TF+PL VKP EKLR L G
Sbjct: 537 VLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKG 590
>sp|Q14683|SMC1A_HUMAN Structural maintenance of chromosomes protein
1A OS=Homo sapiens GN=SMC1A PE=1 SV=2
Length = 1233
Score = 128 bits (321), Expect = 1e-29
Identities = 60/114 (52%), Positives = 85/114 (74%), Gaps = 1/114 (0%)
Frame = +1
Query: 1 VDEIENQLREVKADRRESERDARLSEAVESLKRLFPG-VHGRMTDLCRPIQKKYNLAVTV 177
++++ QL + + DR+ES R R +E +ES+KRL+PG V+GR+ DLC+P QKKY +AVT
Sbjct: 477 LNQVMEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTK 536
Query: 178 AMGKFMDAVVVEDEHTGKECIKYLKEQRLPPQTFIPLQSARVKPIHEKLRTLGG 339
+GK MDA++V+ E TG++CI+Y+KEQR P+TF+PL VKP EKLR L G
Sbjct: 537 VLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKG 590
>sp|O97593|SMC1A_BOVIN Structural maintenance of chromosomes protein
1A OS=Bos taurus GN=SMC1A PE=1 SV=1
Length = 1233
Score = 128 bits (321), Expect = 1e-29
Identities = 60/114 (52%), Positives = 85/114 (74%), Gaps = 1/114 (0%)
Frame = +1
Query: 1 VDEIENQLREVKADRRESERDARLSEAVESLKRLFPG-VHGRMTDLCRPIQKKYNLAVTV 177
++++ QL + + DR+ES R R +E +ES+KRL+PG V+GR+ DLC+P QKKY +AVT
Sbjct: 477 LNQVMEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTK 536
Query: 178 AMGKFMDAVVVEDEHTGKECIKYLKEQRLPPQTFIPLQSARVKPIHEKLRTLGG 339
+GK MDA++V+ E TG++CI+Y+KEQR P+TF+PL VKP EKLR L G
Sbjct: 537 VLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKG 590
>sp|O93308|SMC1A_XENLA Structural maintenance of chromosomes protein
1A OS=Xenopus laevis GN=smc1a PE=1 SV=1
Length = 1232
Score = 127 bits (318), Expect = 2e-29
Identities = 59/114 (51%), Positives = 85/114 (74%), Gaps = 1/114 (0%)
Frame = +1
Query: 1 VDEIENQLREVKADRRESERDARLSEAVESLKRLFPG-VHGRMTDLCRPIQKKYNLAVTV 177
++++ QL + + DR+ES R R +E +ES+KRL+PG V+GR+ DLC+P QKKY +AVT
Sbjct: 477 LNQVMEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTK 536
Query: 178 AMGKFMDAVVVEDEHTGKECIKYLKEQRLPPQTFIPLQSARVKPIHEKLRTLGG 339
+GK MDA++V+ E TG++CI+Y+KEQR P+TF+PL VKP E+LR L G
Sbjct: 537 VLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDERLRELKG 590
>sp|O94383|SMC1_SCHPO Structural maintenance of chromosomes protein
1 OS=Schizosaccharomyces pombe GN=psm1 PE=1 SV=1
Length = 1233
Score = 107 bits (268), Expect = 1e-23
Identities = 49/103 (47%), Positives = 70/103 (67%)
Frame = +1
Query: 19 QLREVKADRRESERDARLSEAVESLKRLFPGVHGRMTDLCRPIQKKYNLAVTVAMGKFMD 198
++ E ADR ES++DA+ EA+ +LKR++P V GR+ DLC P QKKY A+ A+GK D
Sbjct: 491 KILEASADRNESKQDAKKREALYALKRIYPEVKGRIIDLCTPTQKKYESAIAAALGKNFD 550
Query: 199 AVVVEDEHTGKECIKYLKEQRLPPQTFIPLQSARVKPIHEKLR 327
A+VVE + KECI Y+KEQR+ TF P+ + P+++K R
Sbjct: 551 AIVVETQAVAKECIDYIKEQRIGIMTFFPMDTIAASPVNQKFR 593
>sp|Q8NDV3|SMC1B_HUMAN Structural maintenance of chromosomes protein
1B OS=Homo sapiens GN=SMC1B PE=1 SV=2
Length = 1235
Score = 107 bits (266), Expect = 2e-23
Identities = 52/111 (46%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Frame = +1
Query: 10 IENQLREVKADRRESERDARLSEAVESLKRLFP-GVHGRMTDLCRPIQKKYNLAVTVAMG 186
I ++L+ D E +R + +E +E LKRL+P V GR+ DLC PI KKY LAVT G
Sbjct: 480 IRSELQNAGIDTHEGKRQQKRAEVLEHLKRLYPDSVFGRLFDLCHPIHKKYQLAVTKVFG 539
Query: 187 KFMDAVVVEDEHTGKECIKYLKEQRLPPQTFIPLQSARVKPIHEKLRTLGG 339
+F+ A+VV E K+CI++LKE+R P+TF+ L +KPI+E+LR L G
Sbjct: 540 RFITAIVVASEKVAKDCIRFLKEERAEPETFLALDYLDIKPINERLRELKG 590
>sp|Q920F6|SMC1B_MOUSE Structural maintenance of chromosomes protein
1B OS=Mus musculus GN=Smc1b PE=1 SV=1
Length = 1248
Score = 105 bits (262), Expect = 7e-23
Identities = 51/111 (45%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Frame = +1
Query: 10 IENQLREVKADRRESERDARLSEAVESLKRLFP-GVHGRMTDLCRPIQKKYNLAVTVAMG 186
I N+L+ D E +R + +E +E LKRL+P V GR+ DLC PI KKY LAVT G
Sbjct: 480 IRNELQNAGIDNHEGKRQQKRAEVLEHLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKLFG 539
Query: 187 KFMDAVVVEDEHTGKECIKYLKEQRLPPQTFIPLQSARVKPIHEKLRTLGG 339
++M A+VV E K+CI++LK +R P+TF+ L +KPI+E+LR + G
Sbjct: 540 RYMVAIVVASEKIAKDCIRFLKAERAEPETFLALDYLDIKPINERLREIKG 590
>sp|P32908|SMC1_YEAST Structural maintenance of chromosomes protein
1 OS=Saccharomyces cerevisiae GN=SMC1 PE=1 SV=1
Length = 1225
Score = 84.3 bits (207), Expect = 2e-16
Identities = 39/92 (42%), Positives = 63/92 (68%)
Frame = +1
Query: 19 QLREVKADRRESERDARLSEAVESLKRLFPGVHGRMTDLCRPIQKKYNLAVTVAMGKFMD 198
++ ++ A++RE+ ++ +L E + LKR FPGV G + DLC P ++KY LAV+ +GK D
Sbjct: 498 KIDDLSANQRETMKERKLRENIAMLKRFFPGVKGLVHDLCHPKKEKYGLAVSTILGKNFD 557
Query: 199 AVVVEDEHTGKECIKYLKEQRLPPQTFIPLQS 294
+V+VE+ +ECI +LK+QR +FIPL +
Sbjct: 558 SVIVENLTVAQECIAFLKKQRAGTASFIPLDT 589
>sp|P50532|SMC4_XENLA Structural maintenance of chromosomes protein
4 OS=Xenopus laevis GN=smc4 PE=1 SV=1
Length = 1290
Score = 50.8 bits (120), Expect = 2e-06
Identities = 30/103 (29%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Frame = +1
Query: 1 VDEIENQLREVKADRRESERDARLSEAVESLKRL--FPGVHGRMTDLCRPIQKKYNLAVT 174
V E+ ++ E ++ + ++ +A+ K+ PG+ GR+ DL I +KY++A++
Sbjct: 570 VRELRQKVEEARSSLSANRSRGKVLDALIQQKKSGKIPGIFGRLGDL-GAIDEKYDVAIS 628
Query: 175 VAMGKFMDAVVVEDEHTGKECIKYLKEQRLPPQTFIPLQSARV 303
+ G +D +VV+ T +EC+ +LK+Q + TFI L +V
Sbjct: 629 SSCGA-LDHIVVDTIDTAQECVNFLKKQNVGVATFIGLDKMKV 670
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A7Q1S8 |
| Definition |
tr|A7Q1S8|A7Q1S8_VITVI Chromosome chr7 scaffold_44, whole genome shotgun sequence OS=Vitis vinifera |
| Align length |
116 |
| Score (bit) |
212.0 |
| E-value |
8.0e-54 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919243|Adiantum capillus-veneris mRNA, clone:
YMU001_000122_G12.
(349 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A7Q1S8|A7Q1S8_VITVI Chromosome chr7 scaffold_44, whole genome... 212 8e-54
tr|Q8GU56|Q8GU56_ORYSA SMC1 protein OS=Oryza sativa GN=smc1 PE=2... 201 1e-50
tr|B8BN83|B8BN83_ORYSI Putative uncharacterized protein OS=Oryza... 201 1e-50
tr|A3CJW5|A3CJW5_ORYSJ Putative uncharacterized protein OS=Oryza... 201 1e-50
tr|A9SLI2|A9SLI2_PHYPA Condensin complex component SMC1 OS=Physc... 201 1e-50
tr|Q9M1T3|Q9M1T3_ARATH Structural maintenance of chromosomes (SM... 184 1e-45
tr|Q6Q1P4|Q6Q1P4_ARATH Structural maintenance of chromosomes 1 p... 184 1e-45
tr|A5C6Z2|A5C6Z2_VITVI Putative uncharacterized protein OS=Vitis... 148 1e-34
tr|Q2QLI0|Q2QLI0_ORYSJ RecF/RecN/SMC N terminal domain containin... 141 2e-32
tr|A7RFF3|A7RFF3_NEMVE Predicted protein OS=Nematostella vectens... 134 3e-30
tr|A4RUQ7|A4RUQ7_OSTLU Predicted protein OS=Ostreococcus lucimar... 132 7e-30
tr|Q01CC9|Q01CC9_OSTTA Structural maintenance of chromosomes 1 p... 128 1e-28
tr|A2AFQ5|A2AFQ5_MOUSE Structural maintenance of chromosomes 1A ... 128 2e-28
tr|A0JLM6|A0JLM6_MOUSE Smc1a protein (Fragment) OS=Mus musculus ... 128 2e-28
tr|Q6P2R1|Q6P2R1_HUMAN SMC1A protein (Fragment) OS=Homo sapiens ... 128 2e-28
tr|Q6MZR8|Q6MZR8_HUMAN Putative uncharacterized protein DKFZp686... 128 2e-28
tr|B7Z709|B7Z709_HUMAN cDNA FLJ50250, highly similar to Structur... 128 2e-28
tr|A8K7A6|A8K7A6_HUMAN cDNA FLJ77162, highly similar to Homo sap... 128 2e-28
tr|Q7ZTJ9|Q7ZTJ9_XENLA Smc1l1 protein OS=Xenopus laevis GN=smc1a... 127 4e-28
tr|Q7SZI8|Q7SZI8_ORYLA SMC1 alpha (Fragment) OS=Oryzias latipes ... 127 4e-28
tr|Q6DRM9|Q6DRM9_DANRE Chromosome adhesion protein SMC1-like OS=... 127 4e-28
tr|Q4RVZ4|Q4RVZ4_TETNG Chromosome 9 SCAF14991, whole genome shot... 127 4e-28
tr|O73696|O73696_FUGRU Mitosis-specific chromosome segregation p... 127 4e-28
tr|Q8AWB7|Q8AWB7_CHICK SMC1 protein cohesin subunit OS=Gallus ga... 122 7e-27
tr|Q5KM80|Q5KM80_CRYNE Cohesin complex subunit psm1, putative OS... 120 4e-26
tr|Q55XR0|Q55XR0_CRYNE Putative uncharacterized protein OS=Crypt... 120 4e-26
tr|B0DPA0|B0DPA0_LACBS Condensin complex subunit SMC1 OS=Laccari... 120 4e-26
tr|A8NBC9|A8NBC9_COPC7 Putative uncharacterized protein OS=Copri... 117 2e-25
tr|Q5BVI4|Q5BVI4_SCHJA SJCHGC09443 protein (Fragment) OS=Schisto... 117 4e-25
tr|A7EP81|A7EP81_SCLS1 Putative uncharacterized protein OS=Scler... 114 2e-24
>tr|A7Q1S8|A7Q1S8_VITVI Chromosome chr7 scaffold_44, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00028583001
PE=4 SV=1
Length = 1205
Score = 212 bits (539), Expect = 8e-54
Identities = 104/116 (89%), Positives = 111/116 (95%)
Frame = +1
Query: 1 VDEIENQLREVKADRRESERDARLSEAVESLKRLFPGVHGRMTDLCRPIQKKYNLAVTVA 180
+ EIE+QLRE+KADR E+ERDARLS+AVE+LKRLFPGVHGRMT+LCRP QKKYNLAVTVA
Sbjct: 482 ISEIEDQLRELKADRHENERDARLSQAVETLKRLFPGVHGRMTELCRPTQKKYNLAVTVA 541
Query: 181 MGKFMDAVVVEDEHTGKECIKYLKEQRLPPQTFIPLQSARVKPIHEKLRTLGGTAK 348
MGKFMDAVVVEDEHTGKECIKYLKEQRLPPQTFIPLQS RVKPI EKLRTLGGTAK
Sbjct: 542 MGKFMDAVVVEDEHTGKECIKYLKEQRLPPQTFIPLQSVRVKPIVEKLRTLGGTAK 597
>tr|Q8GU56|Q8GU56_ORYSA SMC1 protein OS=Oryza sativa GN=smc1 PE=2
SV=1
Length = 1264
Score = 201 bits (512), Expect = 1e-50
Identities = 99/116 (85%), Positives = 108/116 (93%)
Frame = +1
Query: 1 VDEIENQLREVKADRRESERDARLSEAVESLKRLFPGVHGRMTDLCRPIQKKYNLAVTVA 180
+DEI+ +LRE+KAD+ ESERDAR SE V SLKRLFPGVHGRMT+LCRP QKKYNLAVTVA
Sbjct: 493 LDEIDTKLRELKADKHESERDARFSETVRSLKRLFPGVHGRMTELCRPSQKKYNLAVTVA 552
Query: 181 MGKFMDAVVVEDEHTGKECIKYLKEQRLPPQTFIPLQSARVKPIHEKLRTLGGTAK 348
MGKFMDAVVVEDE+TGKECIKYLKEQRLPPQTFIPLQS RVKPI EKLRTLGG+A+
Sbjct: 553 MGKFMDAVVVEDENTGKECIKYLKEQRLPPQTFIPLQSVRVKPIIEKLRTLGGSAQ 608
>tr|B8BN83|B8BN83_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_39293 PE=4 SV=1
Length = 1246
Score = 201 bits (512), Expect = 1e-50
Identities = 99/116 (85%), Positives = 108/116 (93%)
Frame = +1
Query: 1 VDEIENQLREVKADRRESERDARLSEAVESLKRLFPGVHGRMTDLCRPIQKKYNLAVTVA 180
+DEI+ +LRE+KAD+ ESERDAR SE V SLKRLFPGVHGRMT+LCRP QKKYNLAVTVA
Sbjct: 524 LDEIDTKLRELKADKHESERDARFSETVRSLKRLFPGVHGRMTELCRPSQKKYNLAVTVA 583
Query: 181 MGKFMDAVVVEDEHTGKECIKYLKEQRLPPQTFIPLQSARVKPIHEKLRTLGGTAK 348
MGKFMDAVVVEDE+TGKECIKYLKEQRLPPQTFIPLQS RVKPI EKLRTLGG+A+
Sbjct: 584 MGKFMDAVVVEDENTGKECIKYLKEQRLPPQTFIPLQSVRVKPIIEKLRTLGGSAQ 639
>tr|A3CJW5|A3CJW5_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_035587 PE=4 SV=1
Length = 1224
Score = 201 bits (512), Expect = 1e-50
Identities = 99/116 (85%), Positives = 108/116 (93%)
Frame = +1
Query: 1 VDEIENQLREVKADRRESERDARLSEAVESLKRLFPGVHGRMTDLCRPIQKKYNLAVTVA 180
+DEI+ +LRE+KAD+ ESERDAR SE V SLKRLFPGVHGRMT+LCRP QKKYNLAVTVA
Sbjct: 524 LDEIDTKLRELKADKHESERDARFSETVRSLKRLFPGVHGRMTELCRPSQKKYNLAVTVA 583
Query: 181 MGKFMDAVVVEDEHTGKECIKYLKEQRLPPQTFIPLQSARVKPIHEKLRTLGGTAK 348
MGKFMDAVVVEDE+TGKECIKYLKEQRLPPQTFIPLQS RVKPI EKLRTLGG+A+
Sbjct: 584 MGKFMDAVVVEDENTGKECIKYLKEQRLPPQTFIPLQSVRVKPIIEKLRTLGGSAQ 639
>tr|A9SLI2|A9SLI2_PHYPA Condensin complex component SMC1
OS=Physcomitrella patens subsp. patens GN=CPC1502 PE=4
SV=1
Length = 1247
Score = 201 bits (511), Expect = 1e-50
Identities = 96/116 (82%), Positives = 108/116 (93%)
Frame = +1
Query: 1 VDEIENQLREVKADRRESERDARLSEAVESLKRLFPGVHGRMTDLCRPIQKKYNLAVTVA 180
+DEI+NQLRE+KAD+RE+ERD R++EAV SLKRLFPGVHGRMTDLCRP QKKYNLAVTVA
Sbjct: 489 LDEIDNQLRELKADKRENERDKRIAEAVASLKRLFPGVHGRMTDLCRPTQKKYNLAVTVA 548
Query: 181 MGKFMDAVVVEDEHTGKECIKYLKEQRLPPQTFIPLQSARVKPIHEKLRTLGGTAK 348
MG++MDAVVVED+ TGKECIKYLKE RL PQTFIPLQS RVKP+HEKLR LGG+AK
Sbjct: 549 MGRYMDAVVVEDDSTGKECIKYLKEHRLQPQTFIPLQSVRVKPVHEKLRALGGSAK 604
>tr|Q9M1T3|Q9M1T3_ARATH Structural maintenance of chromosomes
(SMC)-like protein OS=Arabidopsis thaliana GN=T5N23_30
PE=4 SV=1
Length = 1265
Score = 184 bits (468), Expect = 1e-45
Identities = 89/116 (76%), Positives = 105/116 (90%)
Frame = +1
Query: 1 VDEIENQLREVKADRRESERDARLSEAVESLKRLFPGVHGRMTDLCRPIQKKYNLAVTVA 180
+ E+E+QL ++ A+R E+ERD+RL++AVESLKRLF GVHGRMTDLCRP +KKYNLAVTVA
Sbjct: 491 IAELEDQLSDLTAERYENERDSRLTQAVESLKRLFQGVHGRMTDLCRPNRKKYNLAVTVA 550
Query: 181 MGKFMDAVVVEDEHTGKECIKYLKEQRLPPQTFIPLQSARVKPIHEKLRTLGGTAK 348
MG+FMDAVVVEDE+TGK+CIKYLKEQRLPP TFIPLQS RVK + E+LR LGGTAK
Sbjct: 551 MGRFMDAVVVEDENTGKDCIKYLKEQRLPPMTFIPLQSVRVKQVFERLRNLGGTAK 606
>tr|Q6Q1P4|Q6Q1P4_ARATH Structural maintenance of chromosomes 1
protein OS=Arabidopsis thaliana GN=SMC1 PE=2 SV=1
Length = 1218
Score = 184 bits (468), Expect = 1e-45
Identities = 89/116 (76%), Positives = 105/116 (90%)
Frame = +1
Query: 1 VDEIENQLREVKADRRESERDARLSEAVESLKRLFPGVHGRMTDLCRPIQKKYNLAVTVA 180
+ E+E+QL ++ A+R E+ERD+RL++AVESLKRLF GVHGRMTDLCRP +KKYNLAVTVA
Sbjct: 483 IAELEDQLSDLTAERYENERDSRLTQAVESLKRLFQGVHGRMTDLCRPNRKKYNLAVTVA 542
Query: 181 MGKFMDAVVVEDEHTGKECIKYLKEQRLPPQTFIPLQSARVKPIHEKLRTLGGTAK 348
MG+FMDAVVVEDE+TGK+CIKYLKEQRLPP TFIPLQS RVK + E+LR LGGTAK
Sbjct: 543 MGRFMDAVVVEDENTGKDCIKYLKEQRLPPMTFIPLQSVRVKQVFERLRNLGGTAK 598
>tr|A5C6Z2|A5C6Z2_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_015634 PE=4 SV=1
Length = 451
Score = 148 bits (374), Expect = 1e-34
Identities = 71/81 (87%), Positives = 78/81 (96%)
Frame = +1
Query: 1 VDEIENQLREVKADRRESERDARLSEAVESLKRLFPGVHGRMTDLCRPIQKKYNLAVTVA 180
+ EIE+QLRE+KADR E+ERDARLS+AVE+LKRLFPGVHGRMT+LCRP QKKYNLAVTVA
Sbjct: 331 ISEIEDQLRELKADRHENERDARLSQAVETLKRLFPGVHGRMTELCRPTQKKYNLAVTVA 390
Query: 181 MGKFMDAVVVEDEHTGKECIK 243
MGKFMDAVVVEDEHTGKECIK
Sbjct: 391 MGKFMDAVVVEDEHTGKECIK 411
>tr|Q2QLI0|Q2QLI0_ORYSJ RecF/RecN/SMC N terminal domain containing
protein, expressed OS=Oryza sativa subsp. japonica
GN=LOC_Os12g44390 PE=4 SV=2
Length = 573
Score = 141 bits (355), Expect = 2e-32
Identities = 68/81 (83%), Positives = 75/81 (92%)
Frame = +1
Query: 1 VDEIENQLREVKADRRESERDARLSEAVESLKRLFPGVHGRMTDLCRPIQKKYNLAVTVA 180
+DEI+ +LRE+KAD+ ESERDAR SE V SLKRLFPGVHGRMT+LCRP QKKYNLAVTVA
Sbjct: 489 LDEIDTKLRELKADKHESERDARFSETVRSLKRLFPGVHGRMTELCRPSQKKYNLAVTVA 548
Query: 181 MGKFMDAVVVEDEHTGKECIK 243
MGKFMDAVVVEDE+TGKECIK
Sbjct: 549 MGKFMDAVVVEDENTGKECIK 569
>tr|A7RFF3|A7RFF3_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g237840 PE=4 SV=1
Length = 1216
Score = 134 bits (336), Expect = 3e-30
Identities = 59/116 (50%), Positives = 86/116 (74%)
Frame = +1
Query: 1 VDEIENQLREVKADRRESERDARLSEAVESLKRLFPGVHGRMTDLCRPIQKKYNLAVTVA 180
++ ++ +L E K+++ ES R + E ++S+KRLFPGVHGR+ +LC P KKYNLAVT
Sbjct: 460 LESVQLELNEAKSNKHESARHQKKKEVLDSMKRLFPGVHGRLIELCEPTHKKYNLAVTKV 519
Query: 181 MGKFMDAVVVEDEHTGKECIKYLKEQRLPPQTFIPLQSARVKPIHEKLRTLGGTAK 348
+G MDAV+V+ E T K+CI+YLKEQR +TF+PL + +VKP++E+LR +GG K
Sbjct: 520 LGMNMDAVIVDSEKTAKDCIQYLKEQRADRETFLPLDAIKVKPVNEQLRQIGGNTK 575
|