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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919244
Clone id YMU001_000122_H01
Library
Length 506
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000122_H01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CGAGGGTGTGGACATTTCAGGAAGCAGTTCTTTCCAAGAGGCGACGGTATTGCATTCGGT
GTGTTGATATAAGAGAGGAGGCAGTAGATGATTCGAGGCCTTTCATGGACAACTGGAGTA
GGTTTATGATCAAGCTTAGTACAGCTTATACGGATGATTCCTGCATTAGGGTTATTGAAG
AGGAGGAACTTTGGGAGCAGCTCTTGTCACTTTATCGTGGCATAAGCATTCTGGTGAAGC
AGGTAGGAGTTGAGTCATCCTCCTCTCACTGGATGTACAAAACAGTGTGGAACATGGAGA
TAATTATACGCTCCTGGCTGAAATTACTGACAAATGAATTCTTTATGTTCCCCTCCTTAA
GCGAGGTACTAGGACAATGTTCTTCCTATCGCAAAAGCAAGTATCCAGCTGATCGCATCA
ACAGTGTCCTTGGTTTGGCCGGCATTACCGACTTCTCCGCACCCAAGGATGGAAACTTGA
AAGCTTTCACAGTTGAGTTCCTGAAA
■■Homology search results ■■ -
sp_hit_id Q5UPD4
Definition sp|Q5UPD4|YL060_MIMIV Putative F-box and FNIP repeat-containing protein L60 OS=Acanthamoeba polyphaga mimivirus
Align length 31
Score (bit) 30.8
E-value 3.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919244|Adiantum capillus-veneris mRNA, clone:
YMU001_000122_H01.
         (506 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5UPD4|YL060_MIMIV Putative F-box and FNIP repeat-containing ...    31   3.8  

>sp|Q5UPD4|YL060_MIMIV Putative F-box and FNIP repeat-containing
           protein L60 OS=Acanthamoeba polyphaga mimivirus
           GN=MIMI_L60 PE=4 SV=1
          Length = 621

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 350 EHKEFICQ*FQPGAYNYLHVPHCFVHPVRGG 258
           E  + + Q   P    YL +PHC+ HP++ G
Sbjct: 342 ELNQILDQTILPETLTYLRIPHCYNHPIKPG 372
tr_hit_id Q2BA63
Definition tr|Q2BA63|Q2BA63_9BACI 6-phosphogluconate dehydrogenase OS=Bacillus sp. NRRL B-14911
Align length 59
Score (bit) 33.1
E-value 7.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919244|Adiantum capillus-veneris mRNA, clone:
YMU001_000122_H01.
         (506 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2BA63|Q2BA63_9BACI 6-phosphogluconate dehydrogenase OS=Bacil...    33   7.8  

>tr|Q2BA63|Q2BA63_9BACI 6-phosphogluconate dehydrogenase OS=Bacillus
           sp. NRRL B-14911 GN=B14911_14822 PE=4 SV=1
          Length = 300

 Score = 33.1 bits (74), Expect = 7.8
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
 Frame = +3

Query: 249 VESSSSHWMYKTV---WNMEIIIRSWL-KLLTNEFFMFPSLSEVLGQCSSYRKSKYPAD 413
           +E S+  + YK V   WN   +IRSWL +LL N F   P L  + G  +S  + K+  +
Sbjct: 192 LEKSNFDYDYKEVSRVWNNGSVIRSWLSELLENAFSKDPKLEGIRGVMNSSGEGKWTVE 250