BP919253 |
Clone id |
YMU001_000123_A02 |
Library |
YMU01 |
Length |
363 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000123_A02. |
Accession |
BP919253 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL73Contig1 |
Sequence |
TTTTTTTTTTGAAGATAATGGCAGATTACAATTGCTGAGACTAAACCCAAAAGTAAGTGA CATCATTACGGTTCAAAAAGTTAAATTCAGCAGAGCAATAGCTGCTCATTCTACATCCAA AACATGACTTTGAAAGTCACATACATCAAGCCTTCTGATAGACGTAGGTCAGGCCACATT TGCCGCAGTAGTGGCGATCATGATGATTGGCCATGAAAGTTCCAGCTCCACATTCAGCAT TTGGACACTCCTTCCGAAGTCGTTGCACCTTCCCAGAGTCATCCACCTTGTAGAATTGGA GCACTGCAAGCTTTACCTTCTTCTTCTTATGCTTGAGCTTTTTGGGCTTGGTGTAAGTCT TCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P62981 |
Definition |
sp|P62981|RS27A_SOLTU 40S ribosomal protein S27a OS=Solanum tuberosum |
Align length |
54 |
Score (bit) |
114.0 |
E-value |
1.0e-25 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
O04829 |
Definition |
tr|O04829|O04829_SOLTU Ubiquitin extension protein OS=Solanum tuberosum |
Align length |
54 |
Score (bit) |
117.0 |
E-value |
2.0e-25 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919253|Adiantum capillus-veneris mRNA, clone: YMU001_000123_A02. (353 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|O04829|O04829_SOLTU Ubiquitin extension protein OS=Solanum tu... 117 2e-25 tr|B7FGN8|B7FGN8_MEDTR Putative uncharacterized protein OS=Medic... 117 2e-25 tr|B5LWQ7|B5LWQ7_ZIZJJ Ubiquitin extensive-like protein OS=Zizip... 117 2e-25 tr|A9P863|A9P863_POPTR Putative uncharacterized protein OS=Popul... 117 2e-25 tr|A7Q059|A7Q059_VITVI Chromosome chr8 scaffold_41, whole genome... 117 2e-25 tr|A5B102|A5B102_VITVI Putative uncharacterized protein OS=Vitis... 117 2e-25 tr|A5AGV0|A5AGV0_VITVI Putative uncharacterized protein (Chromos... 117 2e-25 tr|A9XB15|A9XB15_HEVBR Ubiquitin extension protein OS=Hevea bras... 117 3e-25 tr|Q06H21|Q06H21_ARAHY Ubiquitin/ribosomal protein S27a OS=Arach... 117 4e-25 tr|A5C8S5|A5C8S5_VITVI Putative uncharacterized protein (Chromos... 116 5e-25 tr|Q84XC3|Q84XC3_MALDO Ubiquitin/ribosomal fusion protein OS=Mal... 116 6e-25 tr|Q45FL8|Q45FL8_TOBAC Ubiquitin extension protein OS=Nicotiana ... 116 6e-25 tr|Q2QDG1|Q2QDG1_GOSHI Ubiquitin extension protein OS=Gossypium ... 116 6e-25 tr|Q6UCJ3|Q6UCJ3_CUCSA Ubiquitin extension protein OS=Cucumis sa... 115 8e-25 tr|Q5EC25|Q5EC25_NICBE Ubiquitin/s27a 40S ribosomal protein OS=N... 115 8e-25 tr|O49906|O49906_TOBAC Ubiquitin extension protein OS=Nicotiana ... 115 8e-25 tr|A9T8M3|A9T8M3_PHYPA Predicted protein OS=Physcomitrella paten... 115 8e-25 tr|A0MKC8|A0MKC8_CAPAN Ubiquitin extension protein OS=Capsicum a... 115 8e-25 tr|B7FH93|B7FH93_MEDTR Putative uncharacterized protein OS=Medic... 115 1e-24 tr|B3TLP8|B3TLP8_ELAGV Ubiquitin extension protein-like protein ... 115 1e-24 tr|A9P8M2|A9P8M2_POPTR Putative uncharacterized protein OS=Popul... 115 1e-24 tr|Q8W217|Q8W217_PYRCO Ubiquitin extension protein OS=Pyrus comm... 114 2e-24 tr|A9YTY9|A9YTY9_SOLTU Putative ubiquitin extension protein OS=S... 114 2e-24 tr|A9S8F4|A9S8F4_PHYPA Predicted protein OS=Physcomitrella paten... 114 2e-24 tr|A9RJI9|A9RJI9_PHYPA Predicted protein OS=Physcomitrella paten... 114 2e-24 tr|Q9FUL5|Q9FUL5_PRUAV Ubiquitin/ribosomal protein 27a OS=Prunus... 114 3e-24 tr|B8LKJ2|B8LKJ2_PICSI Putative uncharacterized protein OS=Picea... 113 4e-24 tr|Q0MW35|Q0MW35_9ROSA Ubiquitin extension protein OS=Morus bomb... 111 2e-23 tr|Q5I6U1|Q5I6U1_NICBE Ubiquitin/s27a 40s ribosomal protein OS=N... 110 3e-23 tr|Q9ARZ9|Q9ARZ9_ORYSJ cDNA clone:001-043-B08, full insert seque... 104 2e-21
>tr|O04829|O04829_SOLTU Ubiquitin extension protein OS=Solanum tuberosum PE=2 SV=1 Length = 156
Score = 117 bits (294), Expect = 2e-25 Identities = 53/54 (98%), Positives = 53/54 (98%) Frame = -3
Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 100 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|B7FGN8|B7FGN8_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 155
Score = 117 bits (294), Expect = 2e-25 Identities = 53/54 (98%), Positives = 53/54 (98%) Frame = -3
Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 100 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|B5LWQ7|B5LWQ7_ZIZJJ Ubiquitin extensive-like protein OS=Ziziphus jujuba GN=UBQ PE=2 SV=1 Length = 156
Score = 117 bits (294), Expect = 2e-25 Identities = 53/54 (98%), Positives = 53/54 (98%) Frame = -3
Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 100 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|A9P863|A9P863_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 156
Score = 117 bits (294), Expect = 2e-25 Identities = 53/54 (98%), Positives = 53/54 (98%) Frame = -3
Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 100 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|A7Q059|A7Q059_VITVI Chromosome chr8 scaffold_41, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027151001 PE=4 SV=1 Length = 156
Score = 117 bits (294), Expect = 2e-25 Identities = 53/54 (98%), Positives = 53/54 (98%) Frame = -3
Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 100 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|A5B102|A5B102_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036195 PE=4 SV=1 Length = 156
Score = 117 bits (294), Expect = 2e-25 Identities = 53/54 (98%), Positives = 53/54 (98%) Frame = -3
Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 100 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|A5AGV0|A5AGV0_VITVI Putative uncharacterized protein (Chromosome chr7 scaffold_42, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00028185001 PE=4 SV=1 Length = 156
Score = 117 bits (294), Expect = 2e-25 Identities = 53/54 (98%), Positives = 53/54 (98%) Frame = -3
Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 100 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|A9XB15|A9XB15_HEVBR Ubiquitin extension protein OS=Hevea brasiliensis GN=UEP1 PE=2 SV=1 Length = 156
Score = 117 bits (293), Expect = 3e-25 Identities = 52/54 (96%), Positives = 53/54 (98%) Frame = -3
Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139 LA+LQFYKVDDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 100 LAILQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|Q06H21|Q06H21_ARAHY Ubiquitin/ribosomal protein S27a OS=Arachis hypogaea PE=2 SV=1 Length = 155
Score = 117 bits (292), Expect = 4e-25 Identities = 51/54 (94%), Positives = 53/54 (98%) Frame = -3
Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139 LA+LQFYK+DDSGKVQRLRKECPNAECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 100 LAILQFYKIDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>tr|A5C8S5|A5C8S5_VITVI Putative uncharacterized protein (Chromosome undetermined scaffold_174, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00006610001 PE=4 SV=1 Length = 156
Score = 116 bits (291), Expect = 5e-25 Identities = 52/54 (96%), Positives = 53/54 (98%) Frame = -3
Query: 300 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHHDRHYCGKCGLTYVYQKA 139 LAVLQFYKVDDSGKVQRLRKECPN+ECGAGTFMANH DRHYCGKCGLTYVYQKA Sbjct: 100 LAVLQFYKVDDSGKVQRLRKECPNSECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
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