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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919254
Clone id YMU001_000123_A03
Library
Length 480
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000123_A03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CGTCGTTTCTTACCCTTTCTGTCCTCATCACTCCAGTCAGAAAAGGATGAGCTGTCCGAG
CTGTCAGAAGAAGATTAGGACGAGCTGGACAATGCTTTGAAGTGTAGACACTTCTTCTGT
TTTCTTACTTTCTCAAAAGAAGATTTTCGGCCCAAGTAACCAGTGAAGTCAATTCCCTTG
TTACGTTTCTTTAGTTACTTTCTCCTTTGACCCATATAGTTGGTTGACTCGTTTTTCGAC
AATGTGCTCGAGTTCATCTTCAGTAAACATCCTTGGAGTAGGAGGTTTCTTGACTGCCAG
TTTCATTGGTGATTCAATGGCTTTCTGTCAATGAGTATACACTTCATCCATCAGGTGCCG
GATCAAAAATTTGGCATATTGTGGGTCCTTGGAAAACTGGAGCATTTGCTTTGCACACTT
CATGATATTGACATTGCATCTCCATGAGTTGATACTGTGTAGGGCGAGGTGGCCCATACT
■■Homology search results ■■ -
sp_hit_id Q7KT91
Definition sp|Q7KT91|C3390_DROME Non-lysosomal glucosylceramidase OS=Drosophila melanogaster
Align length 62
Score (bit) 31.6
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919254|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_A03.
         (480 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7KT91|C3390_DROME Non-lysosomal glucosylceramidase OS=Drosop...    32   1.9  
sp|Q64112|IFIT2_MOUSE Interferon-induced protein with tetratrico...    32   2.0  
sp|P46307|RR3_CHLMO 30S ribosomal protein S3, chloroplastic OS=C...    30   4.4  
sp|Q03355|PER_DROSI Period circadian protein (Fragments) OS=Dros...    30   5.6  
sp|Q03354|PER_DROSE Period circadian protein (Fragments) OS=Dros...    30   5.6  
sp|P07663|PER_DROME Period circadian protein OS=Drosophila melan...    30   5.6  
sp|Q03353|PER_DROMA Period circadian protein (Fragments) OS=Dros...    30   5.6  
sp|Q6ZMY3|SPOC1_HUMAN SPOC domain-containing protein 1 OS=Homo s...    30   7.4  
sp|Q9LYY6|FK108_ARATH Putative F-box/Kelch-repeat protein At5g02...    30   7.4  
sp|Q03562|BRE3_CAEEL Beta-1,4-mannosyltransferase bre-3 OS=Caeno...    30   7.4  
sp|A8XAC4|BRE3_CAEBR Beta-1,4-mannosyltransferase bre-3 OS=Caeno...    30   7.4  
sp|Q24767|PER_DROYA Period circadian protein OS=Drosophila yakub...    29   9.6  
sp|P12348|PER_DROPS Period circadian protein OS=Drosophila pseud...    29   9.6  
sp|P57646|Y586_BUCAI UPF0341 protein BU586 OS=Buchnera aphidicol...    29   9.8  
sp|Q8C3P7|MTA70_MOUSE N6-adenosine-methyltransferase 70 kDa subu...    29   9.8  

>sp|Q7KT91|C3390_DROME Non-lysosomal glucosylceramidase
           OS=Drosophila melanogaster GN=CG33090 PE=1 SV=1
          Length = 948

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 17/62 (27%), Positives = 31/62 (50%)
 Frame = -3

Query: 451 QLMEMQCQYHEVCKANAPVFQGPTICQIFDPAPDG*SVYSLTESH*ITNETGSQETSYSK 272
           ++ EM C Y+  C+    +    T C  FDPA +G  +++  + H   +E  + E   +K
Sbjct: 319 KISEMPCSYNLACRVLPEI--SITRCPQFDPAGNGEQLWAQLKEHGQLSEHPTSEALKTK 376

Query: 271 DV 266
           D+
Sbjct: 377 DI 378


>sp|Q64112|IFIT2_MOUSE Interferon-induced protein with
           tetratricopeptide repeats 2 OS=Mus musculus GN=Ifit2
           PE=2 SV=1
          Length = 472

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 17/64 (26%), Positives = 34/64 (53%)
 Frame = -1

Query: 468 LALHSINSWRCNVNIMKCAKQMLQFSKDPQYAKFLIRHLMDEVYTH*QKAIESPMKLAVK 289
           +A + ++ W      +   +Q +Q S D  Y K L+   +D V+ H  +A+ + ++ A+K
Sbjct: 180 IAFYRLDDWPARNYCIDSLEQAIQLSPDNTYVKVLLALKLDAVHVHKNQAM-ALVEEALK 238

Query: 288 KPPT 277
           K P+
Sbjct: 239 KDPS 242


>sp|P46307|RR3_CHLMO 30S ribosomal protein S3, chloroplastic
           OS=Chlamydomonas moewusii GN=rps3 PE=3 SV=1
          Length = 800

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 238 DNVLEFIFSKHPWSRRFLDCQF 303
           +NVL  +  KHP+ R FLDC+F
Sbjct: 639 NNVLMKLAKKHPFDRTFLDCKF 660


>sp|Q03355|PER_DROSI Period circadian protein (Fragments)
           OS=Drosophila simulans GN=per PE=3 SV=2
          Length = 656

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 25/87 (28%), Positives = 39/87 (44%)
 Frame = -3

Query: 397 VFQGPTICQIFDPAPDG*SVYSLTESH*ITNETGSQETSYSKDVY*R*TRAHCRKTSQPT 218
           VFQGP  C +F+ AP        T    I+ E  S+ T   +D+     +      S+P+
Sbjct: 481 VFQGPKQCNVFEAAP--------TCKLKISEEAQSRNTRIKEDI----VKRLAETVSRPS 528

Query: 217 IWVKGESN*RNVTRELTSLVTWAENLL 137
             VK E     V+R   +L ++ E L+
Sbjct: 529 DTVKQE-----VSRRCQALASFMETLM 550


>sp|Q03354|PER_DROSE Period circadian protein (Fragments)
           OS=Drosophila sechellia GN=per PE=3 SV=2
          Length = 661

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 25/87 (28%), Positives = 39/87 (44%)
 Frame = -3

Query: 397 VFQGPTICQIFDPAPDG*SVYSLTESH*ITNETGSQETSYSKDVY*R*TRAHCRKTSQPT 218
           VFQGP  C +F+ AP        T    I+ E  S+ T   +D+     +      S+P+
Sbjct: 480 VFQGPKQCNVFEAAP--------TCKLKISEEAQSRNTRIKEDI----VKRLAETVSRPS 527

Query: 217 IWVKGESN*RNVTRELTSLVTWAENLL 137
             VK E     V+R   +L ++ E L+
Sbjct: 528 DTVKQE-----VSRRCQALASFMETLM 549


>sp|P07663|PER_DROME Period circadian protein OS=Drosophila
           melanogaster GN=per PE=1 SV=2
          Length = 1224

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 25/87 (28%), Positives = 39/87 (44%)
 Frame = -3

Query: 397 VFQGPTICQIFDPAPDG*SVYSLTESH*ITNETGSQETSYSKDVY*R*TRAHCRKTSQPT 218
           VFQGP  C +F+ AP        T    I+ E  S+ T   +D+     +      S+P+
Sbjct: 495 VFQGPKQCNVFEAAP--------TCKLKISEEAQSRNTRIKEDI----VKRLAETVSRPS 542

Query: 217 IWVKGESN*RNVTRELTSLVTWAENLL 137
             VK E     V+R   +L ++ E L+
Sbjct: 543 DTVKQE-----VSRRCQALASFMETLM 564


>sp|Q03353|PER_DROMA Period circadian protein (Fragments)
           OS=Drosophila mauritiana GN=per PE=3 SV=2
          Length = 676

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 25/87 (28%), Positives = 39/87 (44%)
 Frame = -3

Query: 397 VFQGPTICQIFDPAPDG*SVYSLTESH*ITNETGSQETSYSKDVY*R*TRAHCRKTSQPT 218
           VFQGP  C +F+ AP        T    I+ E  S+ T   +D+     +      S+P+
Sbjct: 481 VFQGPKQCNVFEAAP--------TCKLKISEEAQSRNTRIKEDI----VKRLAETVSRPS 528

Query: 217 IWVKGESN*RNVTRELTSLVTWAENLL 137
             VK E     V+R   +L ++ E L+
Sbjct: 529 DTVKQE-----VSRRCQALASFMETLM 550


>sp|Q6ZMY3|SPOC1_HUMAN SPOC domain-containing protein 1 OS=Homo
           sapiens GN=SPOCD1 PE=2 SV=1
          Length = 1216

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 400 PVFQGPTICQIFDPAPDG 347
           P+ QGP  CQ+F P+P G
Sbjct: 525 PMVQGPAGCQVFQPSPSG 542


>sp|Q9LYY6|FK108_ARATH Putative F-box/Kelch-repeat protein At5g02990
           OS=Arabidopsis thaliana GN=At5g02990 PE=4 SV=1
          Length = 433

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -3

Query: 244 HCRKTSQPTIWVKGESN*RNVTRELTSLVTWAENLLLRK*ENRRSVYTSKHCPAR 80
           HC K  +  IW  G S  R   +EL   V W   ++ R     +++Y + +C AR
Sbjct: 64  HCTKECKTEIWCAGLSFERRGLKELWGFVEWIFRIIDRL-RGFKTIYIAFNCLAR 117


>sp|Q03562|BRE3_CAEEL Beta-1,4-mannosyltransferase bre-3
           OS=Caenorhabditis elegans GN=bre-3 PE=2 SV=2
          Length = 455

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 350 IRCRIKNLAYCGSLENWSICFAHF 421
           + C +K+  +C  L  W +CFA+F
Sbjct: 1   MNCEVKHALHCAVLVAWIVCFAYF 24
tr_hit_id B3MKK0
Definition tr|B3MKK0|B3MKK0_DROAN GF15415 OS=Drosophila ananassae
Align length 62
Score (bit) 35.0
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919254|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_A03.
         (480 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3MKK0|B3MKK0_DROAN GF15415 OS=Drosophila ananassae GN=GF1541...    35   1.9  
tr|B4MZB3|B4MZB3_DROWI GK18271 OS=Drosophila willistoni GN=GK182...    34   4.1  
tr|A9WFU5|A9WFU5_CHLAA Putative uncharacterized protein OS=Chlor...    33   5.4  
tr|B2QH82|B2QH82_9CHLR Putative uncharacterized protein OS=Chlor...    33   5.4  
tr|B4M8S0|B4M8S0_DROVI GJ18180 OS=Drosophila virilis GN=GJ18180 ...    33   7.0  
tr|A6NDF3|A6NDF3_HUMAN Putative uncharacterized protein CXorf26 ...    33   9.2  

>tr|B3MKK0|B3MKK0_DROAN GF15415 OS=Drosophila ananassae GN=GF15415
           PE=4 SV=1
          Length = 894

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 18/62 (29%), Positives = 32/62 (51%)
 Frame = -3

Query: 451 QLMEMQCQYHEVCKANAPVFQGPTICQIFDPAPDG*SVYSLTESH*ITNETGSQETSYSK 272
           ++ EM C Y+  C+    +    + C  FDPA +G  +++  + H   NE  + ET  +K
Sbjct: 265 KIAEMPCSYNLACRVRPEI--SISRCPQFDPAGNGEQLWAQLKEHGQLNEQPTPETLKTK 322

Query: 271 DV 266
           D+
Sbjct: 323 DI 324


>tr|B4MZB3|B4MZB3_DROWI GK18271 OS=Drosophila willistoni GN=GK18271
           PE=4 SV=1
          Length = 955

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 17/62 (27%), Positives = 34/62 (54%)
 Frame = -3

Query: 451 QLMEMQCQYHEVCKANAPVFQGPTICQIFDPAPDG*SVYSLTESH*ITNETGSQETSYSK 272
           ++ +M C Y+  C+    +    T C  FDPA +G ++++  + H   ++  +QET  +K
Sbjct: 326 KIADMPCSYNLACRVLPDI--SITRCPQFDPAGNGEALWAQLKEHGQLSDEPTQETLKTK 383

Query: 271 DV 266
           D+
Sbjct: 384 DI 385


>tr|A9WFU5|A9WFU5_CHLAA Putative uncharacterized protein
           OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635
           / J-10-fl) GN=Caur_2236 PE=4 SV=1
          Length = 170

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 11  YPFCPHHSSQKRMSCPSCQKKIRTSW 88
           Y FCPH  +Q R  C +CQK +  +W
Sbjct: 112 YLFCPHCHTQLRRRCDACQKVVDLTW 137


>tr|B2QH82|B2QH82_9CHLR Putative uncharacterized protein
           OS=Chloroflexus sp. Y-400-fl GN=Chy400DRAFT_0386 PE=4
           SV=1
          Length = 170

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 11  YPFCPHHSSQKRMSCPSCQKKIRTSW 88
           Y FCPH  +Q R  C +CQK +  +W
Sbjct: 112 YLFCPHCHTQLRRRCDACQKVVDLTW 137


>tr|B4M8S0|B4M8S0_DROVI GJ18180 OS=Drosophila virilis GN=GJ18180
           PE=4 SV=1
          Length = 869

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 18/61 (29%), Positives = 31/61 (50%)
 Frame = -3

Query: 448 LMEMQCQYHEVCKANAPVFQGPTICQIFDPAPDG*SVYSLTESH*ITNETGSQETSYSKD 269
           + +M C Y+  C+    +    T C  FDPA +G  +++  + H   +E  + ET  SKD
Sbjct: 241 IADMPCSYNLACRVLPEI--SITRCPQFDPAGNGEQLWAQLKEHGQLSEQPTAETLRSKD 298

Query: 268 V 266
           +
Sbjct: 299 I 299


>tr|A6NDF3|A6NDF3_HUMAN Putative uncharacterized protein CXorf26
           OS=Homo sapiens GN=CXorf26 PE=4 SV=2
          Length = 232

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 20/51 (39%), Positives = 29/51 (56%)
 Frame = -1

Query: 327 QKAIESPMKLAVKKPPTPRMFTEDELEHIVEKRVNQLYGSKEKVTKET*QG 175
           +  +E   +L V+K  TPRM  E+  E IVEK+  +    K K+TKE  +G
Sbjct: 133 ESTMEEKKELTVEKKRTPRM--EERKELIVEKKKRKESTEKTKLTKEEKKG 181