BP919255
Clone id YMU001_000123_A04
Library
Length 496
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000123_A04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTTTTTTTTTTTTTTTTGATTGAACTCTATCCATCTTCGTCCATTATTCAAATTACTA
GTATGCAATGTACTTGTACAATCCAAGCATGCCTTGTGCCGATCATTCTTGCTCAGTGAA
AGGGTGTCTTATACTCTTAATTACTCTAGCTTAACTCCTCTCACAGCCAGAGGTCCAGAG
CCTACCTGGTTCTGCCAATCCTCCCCCATCTTTCACAAGACTCGAATATAAACTCTCCTA
ATGGTGACTTTTCACGCTCATTGCCCTTTTTGGCATACTGAAACATGCCTTGGAGAAGAA
GGGAGACAAGTGTACAAATTTCATATGCCGTTCTTTAGTGTGTAAATGGATCCATTCTTT
AAGGGCTCATGCCATTTTCTTTCTCTCTCTTTGTTTTAATATGCCAGCCATATCTTGAAT
CCTGCACATAGATTCAATGACTGAATATTTCACCAATCTTTGGGGTTCAATTTACTGGGT
GCTGCAATCTGTCGCT
■■Homology search results ■■ -
sp_hit_id Q8VD00
Definition sp|Q8VD00|TMM97_MOUSE Transmembrane protein 97 OS=Mus musculus
Align length 33
Score (bit) 33.5
E-value 0.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919255|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_A04.
(477 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8VD00|TMM97_MOUSE Transmembrane protein 97 OS=Mus musculus G... 33 0.50
sp|Q5U3Y7|TMM97_RAT Transmembrane protein 97 OS=Rattus norvegicu... 32 1.1
sp|Q6DFQ5|TMM97_XENTR Transmembrane protein 97 OS=Xenopus tropic... 29 9.4
sp|Q60A92|KUP_METCA Probable potassium transport system protein ... 29 9.4
sp|Q5RB40|HMHA1_PONAB Minor histocompatibility protein HA-1 OS=P... 29 9.4
sp|Q92619|HMHA1_HUMAN Minor histocompatibility protein HA-1 OS=H... 29 9.4
sp|P19218|GP2_RAT Pancreatic secretory granule membrane major gl... 29 9.4

>sp|Q8VD00|TMM97_MOUSE Transmembrane protein 97 OS=Mus musculus
GN=Tmem97 PE=2 SV=1
Length = 176

Score = 33.5 bits (75), Expect = 0.50
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3

Query: 300 FHMPFFSV*MDPFFKGSCHFLSLSLF*YASHIL 398
F +PFF + FFKGSC ++ + YA+H +
Sbjct: 76 FQLPFFPIAAYAFFKGSCRWIRIPAIIYAAHTI 108


>sp|Q5U3Y7|TMM97_RAT Transmembrane protein 97 OS=Rattus norvegicus
GN=Tmem97 PE=2 SV=1
Length = 176

Score = 32.3 bits (72), Expect = 1.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3

Query: 300 FHMPFFSV*MDPFFKGSCHFLSLSLF*YASHIL 398
F +PFF + FFKGSC ++ + YA H +
Sbjct: 76 FQLPFFPIAAYAFFKGSCRWIRIPAIIYAVHTI 108


>sp|Q6DFQ5|TMM97_XENTR Transmembrane protein 97 OS=Xenopus
tropicalis GN=tmem97 PE=2 SV=1
Length = 171

Score = 29.3 bits (64), Expect = 9.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3

Query: 306 MPFFSV*MDPFFKGSCHFLSLSLF*YASHI 395
+PFF V FFKG C ++ + Y++H+
Sbjct: 76 LPFFPVAAYAFFKGGCKWIRIPAIVYSAHV 105


>sp|Q60A92|KUP_METCA Probable potassium transport system protein kup
OS=Methylococcus capsulatus GN=kup PE=3 SV=1
Length = 626

Score = 29.3 bits (64), Expect = 9.4
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +3

Query: 345 GSCHFLSLSLF*YASHILNPAHRFND*IFHQSLGFNLLGAAI 470
G+ F+SL LNP H F HQ LGF LGA +
Sbjct: 184 GTLGFVSLRQTPEVLAALNPLHGFRFLTAHQGLGFAALGAVV 225


>sp|Q5RB40|HMHA1_PONAB Minor histocompatibility protein HA-1
OS=Pongo abelii GN=HMHA1 PE=2 SV=1
Length = 1163

Score = 29.3 bits (64), Expect = 9.4
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3

Query: 63 SKHALCRSFLLSERVSYTLNYSSLTPLTARGP 158
S+HA F LS S+TL S +PLTA P
Sbjct: 96 SRHASAAGFPLSGAASWTLGRSHRSPLTAASP 127


>sp|Q92619|HMHA1_HUMAN Minor histocompatibility protein HA-1 OS=Homo
sapiens GN=HMHA1 PE=1 SV=2
Length = 1136

Score = 29.3 bits (64), Expect = 9.4
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3

Query: 63 SKHALCRSFLLSERVSYTLNYSSLTPLTARGP 158
S+HA F LS S+TL S +PLTA P
Sbjct: 69 SRHASAAGFPLSGAASWTLGRSHRSPLTAASP 100


>sp|P19218|GP2_RAT Pancreatic secretory granule membrane major
glycoprotein GP2 OS=Rattus norvegicus GN=Gp2 PE=1 SV=1
Length = 530

Score = 29.3 bits (64), Expect = 9.4
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Frame = +3

Query: 162 PTWFCQSSPIFHKTRI*TLLMVTFHAHCPFWHTE----TCLGEEGR-QVYK 299
P W S PI + ++ +C FW +E CLGE G VYK
Sbjct: 111 PMWLSGSHPILGDGIVNRTACANWNENCCFWSSEVQVKACLGESGEYHVYK 161


tr_hit_id B1ZUP9
Definition tr|B1ZUP9|B1ZUP9_OPITP Peptidase U32 OS=Opitutus terrae (strain DSM 11246 / PB90-1)
Align length 81
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919255|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_A04.
(477 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B1ZUP9|B1ZUP9_OPITP Peptidase U32 OS=Opitutus terrae (strain ... 34 3.2
tr|Q7NM31|Q7NM31_GLOVI Gll0938 protein OS=Gloeobacter violaceus ... 33 7.1
tr|B5JIB6|B5JIB6_9BACT Peptidase, U32 family OS=Verrucomicrobiae... 33 9.2

>tr|B1ZUP9|B1ZUP9_OPITP Peptidase U32 OS=Opitutus terrae (strain DSM
11246 / PB90-1) GN=Oter_1649 PE=4 SV=1
Length = 852

Score = 34.3 bits (77), Expect = 3.2
Identities = 26/81 (32%), Positives = 34/81 (41%)
Frame = +3

Query: 30 FKLLVCNVLVQSKHALCRSFLLSERVSYTLNYSSLTPLTARGPEPTWFCQSSPIFHKTRI 209
F L V N L +++ L R L SY LN++ L L R P P WF
Sbjct: 662 FSLNVANPL-SAEYFLHRYGLERVTASYDLNFTQLEALLLRAP-PAWFD----------- 708

Query: 210 *TLLMVTFHAHCPFWHTETCL 272
+T H H P +H E C+
Sbjct: 709 -----LTIHQHMPMFHMEHCV 724


>tr|Q7NM31|Q7NM31_GLOVI Gll0938 protein OS=Gloeobacter violaceus
GN=gll0938 PE=4 SV=1
Length = 815

Score = 33.1 bits (74), Expect = 7.1
Identities = 26/81 (32%), Positives = 33/81 (40%)
Frame = +3

Query: 30 FKLLVCNVLVQSKHALCRSFLLSERVSYTLNYSSLTPLTARGPEPTWFCQSSPIFHKTRI 209
F L V N L +K+ R L SY LN + L+ L A P P WF
Sbjct: 634 FSLNVANPLA-AKYLKERYALERLTASYDLNVAQLSALLAGAP-PAWF------------ 679

Query: 210 *TLLMVTFHAHCPFWHTETCL 272
+T H H P +H E C+
Sbjct: 680 ----EITIHQHMPLFHMEHCV 696


>tr|B5JIB6|B5JIB6_9BACT Peptidase, U32 family OS=Verrucomicrobiae
bacterium DG1235 GN=VDG1235_2261 PE=4 SV=1
Length = 877

Score = 32.7 bits (73), Expect = 9.2
Identities = 27/90 (30%), Positives = 36/90 (40%)
Frame = +3

Query: 3 LNSIHLRPLFKLLVCNVLVQSKHALCRSFLLSERVSYTLNYSSLTPLTARGPEPTWFCQS 182
L+ LR F L V N L +++ + R L SY LN + L L P P WF
Sbjct: 686 LSKFPLRGDFSLNVANPLT-AEYLIERYQLQRLTASYDLNATQLAALIEASP-PEWF--- 740

Query: 183 SPIFHKTRI*TLLMVTFHAHCPFWHTETCL 272
+T H H P +H E C+
Sbjct: 741 -------------EITLHQHMPMFHMEHCV 757