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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919256
Clone id YMU001_000123_A05
Library
Length 562
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000123_A05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GAAGAGGAGGCCGACATTTTACCTGGTCGAAAGAAAAGGAAGCGACCAGCGGTGGAGGAA
TGCGACGAATTCAACAGAGAACTGTGCACTCTTCTAGAGAGCAGTAGCAAAATCTTAACA
GCCCATATGGATTCTCAAAATCTCAATTTTCATCTGGACAGGACGCAGCGGAAGGAACAC
GCTGAAAGTCTTGTGCTTGTACTCGGAAAACTTGCGGAGGCAGTGGGAAAGATTGCAGAC
AAGCTCTGAAACAGGTCGAATGTCGAGTAAGCATTGAAAAATGAGAATCTCATTCTGGCG
ATGTTTAGAAAGCGTCAATTATCTGCTTCAAAATTAAATCTGCCCTGCCTCCAATCGCAT
TGTCTTATTTGGCAATTTGGTATGTAAAGGGACCTGAGCAGGCTTTACTACGCTTTCAAA
AGTGTTATATGAAGAGACTTCACGATACCGGAAGCTTGGAGCGGTTTACGCCTCTAATAC
GTCAACTTGCGAGACCCTCATTACCTGAAATGGCTTTCAGTTATAGGTTTCAGATTTAGA
GCCATTAGACAGAAATTAGAAG
■■Homology search results ■■ -
sp_hit_id Q9H6R7
Definition sp|Q9H6R7|CB044_HUMAN WD repeat-containing protein C2orf44 OS=Homo sapiens
Align length 84
Score (bit) 31.2
E-value 3.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919256|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_A05.
         (562 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9H6R7|CB044_HUMAN WD repeat-containing protein C2orf44 OS=Ho...    31   3.7  
sp|Q54JJ6|U663_DICDI UPF0663 protein OS=Dictyostelium discoideum...    31   4.8  
sp|Q09526|YQN5_CAEEL Uncharacterized protein E02H1.5 OS=Caenorha...    30   6.3  

>sp|Q9H6R7|CB044_HUMAN WD repeat-containing protein C2orf44 OS=Homo
           sapiens GN=C2orf44 PE=1 SV=1
          Length = 721

 Score = 31.2 bits (69), Expect = 3.7
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
 Frame = -2

Query: 417 ESVVKPAQVPLHTKLPNKTMRLEAGQI*F*SR*LTLSKHRQNEILIFQCLLDIRPVSELV 238
           E V +PA +P H+  P+ T  LE  +       L   K+ Q+E   +Q   ++  +S  +
Sbjct: 516 EPVTQPASLPRHSSTPDHTSTLEPPR-------LPQRKNLQSEKETYQLSKEVEILSRNL 568

Query: 237 CNLSHCLRKFSEYKH---KTFSVF 175
             +  CL + +   H   K+ SV+
Sbjct: 569 VEMQRCLSELTNRLHNGKKSSSVY 592


>sp|Q54JJ6|U663_DICDI UPF0663 protein OS=Dictyostelium discoideum
           GN=DDB_G0288009 PE=3 SV=1
          Length = 905

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 429 YNTFESVVKPAQVPLHTKLPNKTMRLEAGQ 340
           +N FE ++    +  HTKLPN T ++E  Q
Sbjct: 430 FNAFERIMNVPLIASHTKLPNSTKKIELHQ 459


>sp|Q09526|YQN5_CAEEL Uncharacterized protein E02H1.5
           OS=Caenorhabditis elegans GN=E02H1.5 PE=2 SV=1
          Length = 253

 Score = 30.4 bits (67), Expect = 6.3
 Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
 Frame = +1

Query: 79  ELCT--LLESSSKILTAHMDSQNLNFHLDRTQRK--EHAESLVLVLG 207
           ELC+  L E + K+L AH DSQN    LD +     E+A +L  +LG
Sbjct: 99  ELCSSRLREQAEKVLEAHRDSQNPLNRLDYSSPNFAENARALCSILG 145
tr_hit_id A7PHR2
Definition tr|A7PHR2|A7PHR2_VITVI Chromosome chr17 scaffold_16, whole genome shotgun sequence OS=Vitis vinifera
Align length 75
Score (bit) 71.6
E-value 3.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919256|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_A05.
         (562 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PHR2|A7PHR2_VITVI Chromosome chr17 scaffold_16, whole genom...    72   3e-11
tr|Q8VZ20|Q8VZ20_ARATH Putative uncharacterized protein At2g3355...    68   3e-10
tr|O22805|O22805_ARATH Putative uncharacterized protein At2g3355...    68   3e-10
tr|A7QT73|A7QT73_VITVI Chromosome chr1 scaffold_166, whole genom...    68   4e-10
tr|Q67UM4|Q67UM4_ORYSJ Os02g0516800 protein OS=Oryza sativa subs...    64   4e-09
tr|B8AIN0|B8AIN0_ORYSI Putative uncharacterized protein OS=Oryza...    64   4e-09
tr|A3A7D2|A3A7D2_ORYSJ Putative uncharacterized protein OS=Oryza...    64   4e-09
tr|Q7XLG9|Q7XLG9_ORYSJ OSJNBa0039C07.7 protein OS=Oryza sativa s...    61   4e-08
tr|Q0JDK6|Q0JDK6_ORYSJ Os04g0397500 protein OS=Oryza sativa subs...    61   4e-08
tr|A3ATE6|A3ATE6_ORYSJ Putative uncharacterized protein OS=Oryza...    61   4e-08
tr|A2XSY5|A2XSY5_ORYSI Putative uncharacterized protein OS=Oryza...    61   4e-08
tr|A9SIR6|A9SIR6_PHYPA Predicted protein OS=Physcomitrella paten...    38   0.43 
tr|A0CVN2|A0CVN2_PARTE Chromosome undetermined scaffold_29, whol...    35   2.2  
tr|A6UQL4|A6UQL4_METVS Putative uncharacterized protein OS=Metha...    35   2.2  

>tr|A7PHR2|A7PHR2_VITVI Chromosome chr17 scaffold_16, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00018038001
           PE=4 SV=1
          Length = 306

 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
 Frame = +1

Query: 28  RKKRKRPAVEECDEFNRE--LCTLLESSSKILTAHMDSQNLNFHLDRTQRKEHAESLVLV 201
           R KR+R +V+ C E N E  L  +LE +SK L A +++QN+N  LDR QRK+HA SLV  
Sbjct: 232 RWKRRRVSVDGCAETNMEEQLIKVLERNSKRLNAQLEAQNVNSQLDRDQRKDHANSLVAA 291

Query: 202 LGKLAEAVGKIADKL 246
           L KL +A+ +IADKL
Sbjct: 292 LSKLTDAIVRIADKL 306


>tr|Q8VZ20|Q8VZ20_ARATH Putative uncharacterized protein At2g33550
           OS=Arabidopsis thaliana GN=At2g33550 PE=2 SV=1
          Length = 314

 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 9/81 (11%)
 Frame = +1

Query: 31  KKRKRPAVEECDEFNRE---------LCTLLESSSKILTAHMDSQNLNFHLDRTQRKEHA 183
           +KRKR +  E +E   E         L  +LE + ++L A ++ QNLN  LDR QRK+H 
Sbjct: 234 RKRKRTSFGEKEEEEEEGETKKMQNQLIEILERNGQLLAAQLEVQNLNLKLDREQRKDHG 293

Query: 184 ESLVLVLGKLAEAVGKIADKL 246
           +SLV VL KLA+AV KIADK+
Sbjct: 294 DSLVAVLNKLADAVAKIADKM 314


>tr|O22805|O22805_ARATH Putative uncharacterized protein At2g33550
           OS=Arabidopsis thaliana GN=At2g33550 PE=4 SV=1
          Length = 311

 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 9/81 (11%)
 Frame = +1

Query: 31  KKRKRPAVEECDEFNRE---------LCTLLESSSKILTAHMDSQNLNFHLDRTQRKEHA 183
           +KRKR +  E +E   E         L  +LE + ++L A ++ QNLN  LDR QRK+H 
Sbjct: 231 RKRKRTSFGEKEEEEEEGETKKMQNQLIEILERNGQLLAAQLEVQNLNLKLDREQRKDHG 290

Query: 184 ESLVLVLGKLAEAVGKIADKL 246
           +SLV VL KLA+AV KIADK+
Sbjct: 291 DSLVAVLNKLADAVAKIADKM 311


>tr|A7QT73|A7QT73_VITVI Chromosome chr1 scaffold_166, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00006192001
           PE=4 SV=1
          Length = 340

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 36/75 (48%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
 Frame = +1

Query: 31  KKRKRPAVEECDEFNR---ELCTLLESSSKILTAHMDSQNLNFHLDRTQRKEHAESLVLV 201
           +KRKR  V+  +E  R   +L  +LE + ++L+  +++QN NF LDR QRK+ A+ LV V
Sbjct: 266 RKRKRFTVDGDEETTRLQDQLIEVLERNGRMLSDQLEAQNTNFQLDREQRKDQADCLVAV 325

Query: 202 LGKLAEAVGKIADKL 246
           L KLA+A+G+IADKL
Sbjct: 326 LSKLADALGRIADKL 340


>tr|Q67UM4|Q67UM4_ORYSJ Os02g0516800 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBb0071O21.27 PE=4 SV=1
          Length = 374

 Score = 64.3 bits (155), Expect = 4e-09
 Identities = 34/81 (41%), Positives = 55/81 (67%), Gaps = 7/81 (8%)
 Frame = +1

Query: 25  GRKKRKRPAVEECDEFNR-------ELCTLLESSSKILTAHMDSQNLNFHLDRTQRKEHA 183
           G+K+R+    EE ++  R       +L  +L+ SS+++ A +++QN N  LDR QR++ A
Sbjct: 294 GQKRRRADDDEEEEDDGRRGGELQSKLVEILDRSSRMVAAQLEAQNANSRLDREQRRDQA 353

Query: 184 ESLVLVLGKLAEAVGKIADKL 246
            SL +VLG+LA+A+G+IADKL
Sbjct: 354 ASLAVVLGRLADALGRIADKL 374


>tr|B8AIN0|B8AIN0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_07407 PE=4 SV=1
          Length = 243

 Score = 64.3 bits (155), Expect = 4e-09
 Identities = 34/81 (41%), Positives = 55/81 (67%), Gaps = 7/81 (8%)
 Frame = +1

Query: 25  GRKKRKRPAVEECDEFNR-------ELCTLLESSSKILTAHMDSQNLNFHLDRTQRKEHA 183
           G+K+R+    EE ++  R       +L  +L+ SS+++ A +++QN N  LDR QR++ A
Sbjct: 163 GQKRRRADDDEEEEDDGRRGGELQSKLVEILDRSSRMVAAQLEAQNANSRLDREQRRDQA 222

Query: 184 ESLVLVLGKLAEAVGKIADKL 246
            SL +VLG+LA+A+G+IADKL
Sbjct: 223 ASLAVVLGRLADALGRIADKL 243


>tr|A3A7D2|A3A7D2_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_006704 PE=4 SV=1
          Length = 112

 Score = 64.3 bits (155), Expect = 4e-09
 Identities = 34/81 (41%), Positives = 55/81 (67%), Gaps = 7/81 (8%)
 Frame = +1

Query: 25  GRKKRKRPAVEECDEFNR-------ELCTLLESSSKILTAHMDSQNLNFHLDRTQRKEHA 183
           G+K+R+    EE ++  R       +L  +L+ SS+++ A +++QN N  LDR QR++ A
Sbjct: 32  GQKRRRADDDEEEEDDGRRGGELQSKLVEILDRSSRMVAAQLEAQNANSRLDREQRRDQA 91

Query: 184 ESLVLVLGKLAEAVGKIADKL 246
            SL +VLG+LA+A+G+IADKL
Sbjct: 92  ASLAVVLGRLADALGRIADKL 112


>tr|Q7XLG9|Q7XLG9_ORYSJ OSJNBa0039C07.7 protein OS=Oryza sativa
           subsp. japonica GN=OSJNBa0039C07.7 PE=4 SV=2
          Length = 329

 Score = 61.2 bits (147), Expect = 4e-08
 Identities = 29/73 (39%), Positives = 50/73 (68%)
 Frame = +1

Query: 28  RKKRKRPAVEECDEFNRELCTLLESSSKILTAHMDSQNLNFHLDRTQRKEHAESLVLVLG 207
           +++R   A  E  +   +L  +L+ SS+++ A +++QN+N  LDR QRK+   SL+ VLG
Sbjct: 257 KRQRSDDASGEAPDLQGQLIEILDRSSRMVAAQLEAQNINCQLDREQRKDQVSSLLGVLG 316

Query: 208 KLAEAVGKIADKL 246
           K+A+A+ +IADK+
Sbjct: 317 KVADALYRIADKM 329


>tr|Q0JDK6|Q0JDK6_ORYSJ Os04g0397500 protein OS=Oryza sativa subsp.
           japonica GN=Os04g0397500 PE=4 SV=1
          Length = 315

 Score = 61.2 bits (147), Expect = 4e-08
 Identities = 29/73 (39%), Positives = 50/73 (68%)
 Frame = +1

Query: 28  RKKRKRPAVEECDEFNRELCTLLESSSKILTAHMDSQNLNFHLDRTQRKEHAESLVLVLG 207
           +++R   A  E  +   +L  +L+ SS+++ A +++QN+N  LDR QRK+   SL+ VLG
Sbjct: 243 KRQRSDDASGEAPDLQGQLIEILDRSSRMVAAQLEAQNINCQLDREQRKDQVSSLLGVLG 302

Query: 208 KLAEAVGKIADKL 246
           K+A+A+ +IADK+
Sbjct: 303 KVADALYRIADKM 315


>tr|A3ATE6|A3ATE6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_014068 PE=4 SV=1
          Length = 224

 Score = 61.2 bits (147), Expect = 4e-08
 Identities = 29/73 (39%), Positives = 50/73 (68%)
 Frame = +1

Query: 28  RKKRKRPAVEECDEFNRELCTLLESSSKILTAHMDSQNLNFHLDRTQRKEHAESLVLVLG 207
           +++R   A  E  +   +L  +L+ SS+++ A +++QN+N  LDR QRK+   SL+ VLG
Sbjct: 152 KRQRSDDASGEAPDLQGQLIEILDRSSRMVAAQLEAQNINCQLDREQRKDQVSSLLGVLG 211

Query: 208 KLAEAVGKIADKL 246
           K+A+A+ +IADK+
Sbjct: 212 KVADALYRIADKM 224