BP919263 |
Clone id |
YMU001_000123_A12 |
Library |
YMU01 |
Length |
377 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000123_A12. |
Accession |
BP919263 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2190Contig1 |
Sequence |
CGTATTCGCAAGAAGCTTAGTGGAACGACAGAGAGGCCCCGCCTTGCAGTGTTTCGGTCG AACCAGTACATGTATGCCCAGGTCATTGACGACACCAAGGGCTGTACCCTAGTCTCTGCC TCTACCATCCACAAGTCTCTTCGAGATGAACTTAACCTTACGGCAGGACCTACAGTTGAT GCTGCCAAGAAAATAGGCGAGGAGATTGCAAAATCCTGTCTGGCCAAAGGCATATCAAAA GTAGCTTTTGATCGAGGCGGTTTTGTGTACCATGGTCGTATCAAAGCACTCGCGGATTCA GCTCGGGAGCATGGCTTGGACTTCTAAATGGTCTGATCATACATTCCTGCTGTCATGTGC ACCATTCTTTGCAAATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8SAY0 |
Definition |
sp|Q8SAY0|RK18_ORYSJ 50S ribosomal protein L18, chloroplastic OS=Oryza sativa subsp. japonica |
Align length |
108 |
Score (bit) |
175.0 |
E-value |
7.0e-44 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q10B71 |
Definition |
tr|Q10B71|Q10B71_ORYSJ Os03g0828100 protein OS=Oryza sativa subsp. japonica |
Align length |
108 |
Score (bit) |
175.0 |
E-value |
1.0e-42 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919263|Adiantum capillus-veneris mRNA, clone: YMU001_000123_A12. (377 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q10B71|Q10B71_ORYSJ Os03g0828100 protein OS=Oryza sativa subs... 175 1e-42 tr|A2XNL2|A2XNL2_ORYSI Putative uncharacterized protein OS=Oryza... 175 1e-42 tr|B6TYR5|B6TYR5_MAIZE 50S ribosomal protein L18 OS=Zea mays PE=... 174 3e-42 tr|B6T0D9|B6T0D9_MAIZE 50S ribosomal protein L18 OS=Zea mays PE=... 174 3e-42 tr|B4FUN6|B4FUN6_MAIZE Putative uncharacterized protein OS=Zea m... 174 3e-42 tr|Q10B70|Q10B70_ORYSJ 50S ribosomal protein L18, chloroplast, p... 169 8e-41 tr|A9THM6|A9THM6_PHYPA Predicted protein (Fragment) OS=Physcomit... 166 4e-40 tr|A9SN54|A9SN54_PHYPA Predicted protein OS=Physcomitrella paten... 166 5e-40 tr|A9NTM2|A9NTM2_PICSI Putative uncharacterized protein OS=Picea... 166 7e-40 tr|A3APA8|A3APA8_ORYSJ Putative uncharacterized protein OS=Oryza... 165 9e-40 tr|A2Q3Y9|A2Q3Y9_MEDTR Ribosomal protein L18 OS=Medicago truncat... 158 1e-37 tr|B7FHH3|B7FHH3_MEDTR Putative uncharacterized protein OS=Medic... 157 3e-37 tr|Q0WWC5|Q0WWC5_ARATH Putative uncharacterized protein At1g4835... 155 9e-37 tr|A9RZT4|A9RZT4_PHYPA Predicted protein OS=Physcomitrella paten... 155 9e-37 tr|A5BNB6|A5BNB6_VITVI Putative uncharacterized protein (Chromos... 150 4e-35 tr|A9PGN8|A9PGN8_POPTR Putative uncharacterized protein OS=Popul... 149 5e-35 tr|B5YDV9|B5YDV9_DICT6 Ribosomal protein L18 OS=Dictyoglomus the... 138 1e-31 tr|B7YDU8|B7YDU8_9BACI Ribosomal protein L18 OS=Geobacillus sp. ... 138 2e-31 tr|B8E1E9|B8E1E9_9BACT Ribosomal protein L18 OS=Dictyoglomus tur... 137 3e-31 tr|B4BSQ8|B4BSQ8_9BACI Ribosomal protein L18 OS=Geobacillus sp. ... 137 3e-31 tr|B1SWD5|B1SWD5_9BACI Ribosomal protein L18 OS=Geobacillus sp. ... 134 2e-30 tr|A8SW24|A8SW24_9FIRM Putative uncharacterized protein OS=Copro... 134 2e-30 tr|A9TBV1|A9TBV1_PHYPA Predicted protein (Fragment) OS=Physcomit... 134 2e-30 tr|B6FLE9|B6FLE9_9CLOT Putative uncharacterized protein OS=Clost... 132 1e-29 tr|A8HNJ8|A8HNJ8_CHLRE Plastid ribosomal protein L18 OS=Chlamydo... 132 1e-29 tr|B1LBM4|B1LBM4_THESQ Ribosomal protein L18 OS=Thermotoga sp. (... 131 1e-29 tr|B7RFH5|B7RFH5_9THEM Ribosomal protein L18 OS=Marinitoga piezo... 131 1e-29 tr|A0ZG60|A0ZG60_NODSP Ribosomal protein L18 OS=Nodularia spumig... 131 2e-29 tr|A0R8J6|A0R8J6_BACAH LSU ribosomal protein L18P OS=Bacillus th... 130 2e-29 tr|Q4MGD4|Q4MGD4_BACCE Ribosomal protein L18 OS=Bacillus cereus ... 130 2e-29
>tr|Q10B71|Q10B71_ORYSJ Os03g0828100 protein OS=Oryza sativa subsp. japonica GN=Os03g0828100 PE=2 SV=1 Length = 170
Score = 175 bits (443), Expect = 1e-42 Identities = 84/108 (77%), Positives = 99/108 (91%) Frame = +1
Query: 1 RIRKKLSGTTERPRLAVFRSNQYMYAQVIDDTKGCTLVSASTIHKSLRDELNLTAGPTVD 180 R+RKK+SGTTERPRL+VFRSN+++YAQVIDDTK CTLVSAST+HKSL +L +AGPTV+ Sbjct: 63 RLRKKVSGTTERPRLSVFRSNKHLYAQVIDDTKSCTLVSASTMHKSLSKDLEYSAGPTVE 122
Query: 181 AAKKIGEEIAKSCLAKGISKVAFDRGGFVYHGRIKALADSAREHGLDF 324 A+KIGE IAKSCL KGI+KV FDRGGF+YHGRIKALAD+ARE+GLDF Sbjct: 123 VAQKIGEVIAKSCLEKGITKVVFDRGGFLYHGRIKALADAARENGLDF 170
>tr|A2XNL2|A2XNL2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14156 PE=4 SV=1 Length = 170
Score = 175 bits (443), Expect = 1e-42 Identities = 84/108 (77%), Positives = 99/108 (91%) Frame = +1
Query: 1 RIRKKLSGTTERPRLAVFRSNQYMYAQVIDDTKGCTLVSASTIHKSLRDELNLTAGPTVD 180 R+RKK+SGTTERPRL+VFRSN+++YAQVIDDTK CTLVSAST+HKSL +L +AGPTV+ Sbjct: 63 RLRKKVSGTTERPRLSVFRSNKHLYAQVIDDTKSCTLVSASTMHKSLSKDLEYSAGPTVE 122
Query: 181 AAKKIGEEIAKSCLAKGISKVAFDRGGFVYHGRIKALADSAREHGLDF 324 A+KIGE IAKSCL KGI+KV FDRGGF+YHGRIKALAD+ARE+GLDF Sbjct: 123 VAQKIGEVIAKSCLEKGITKVVFDRGGFLYHGRIKALADAARENGLDF 170
>tr|B6TYR5|B6TYR5_MAIZE 50S ribosomal protein L18 OS=Zea mays PE=2 SV=1 Length = 165
Score = 174 bits (440), Expect = 3e-42 Identities = 83/108 (76%), Positives = 97/108 (89%) Frame = +1
Query: 1 RIRKKLSGTTERPRLAVFRSNQYMYAQVIDDTKGCTLVSASTIHKSLRDELNLTAGPTVD 180 R+RKK+SGTTERPRL+VFRSN+++YAQVIDDTK CTL SAST+HKSL E +AGPT++ Sbjct: 58 RLRKKVSGTTERPRLSVFRSNKHLYAQVIDDTKQCTLASASTMHKSLSKEFEYSAGPTIE 117
Query: 181 AAKKIGEEIAKSCLAKGISKVAFDRGGFVYHGRIKALADSAREHGLDF 324 A+KIGE IAKSCL KGI+KV FDRGGF+YHGRIKALADSAREHGL+F Sbjct: 118 IAQKIGEVIAKSCLEKGITKVVFDRGGFLYHGRIKALADSAREHGLEF 165
>tr|B6T0D9|B6T0D9_MAIZE 50S ribosomal protein L18 OS=Zea mays PE=2 SV=1 Length = 165
Score = 174 bits (440), Expect = 3e-42 Identities = 83/108 (76%), Positives = 97/108 (89%) Frame = +1
Query: 1 RIRKKLSGTTERPRLAVFRSNQYMYAQVIDDTKGCTLVSASTIHKSLRDELNLTAGPTVD 180 R+RKK+SGTTERPRL+VFRSN+++YAQVIDDTK CTL SAST+HKSL E +AGPT++ Sbjct: 58 RLRKKVSGTTERPRLSVFRSNKHLYAQVIDDTKQCTLASASTMHKSLSKEFEYSAGPTIE 117
Query: 181 AAKKIGEEIAKSCLAKGISKVAFDRGGFVYHGRIKALADSAREHGLDF 324 A+KIGE IAKSCL KGI+KV FDRGGF+YHGRIKALADSAREHGL+F Sbjct: 118 IAQKIGEVIAKSCLEKGINKVVFDRGGFLYHGRIKALADSAREHGLEF 165
>tr|B4FUN6|B4FUN6_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 165
Score = 174 bits (440), Expect = 3e-42 Identities = 83/108 (76%), Positives = 97/108 (89%) Frame = +1
Query: 1 RIRKKLSGTTERPRLAVFRSNQYMYAQVIDDTKGCTLVSASTIHKSLRDELNLTAGPTVD 180 R+RKK+SGTTERPRL+VFRSN+++YAQVIDDTK CTL SAST+HKSL E +AGPT++ Sbjct: 58 RLRKKVSGTTERPRLSVFRSNKHLYAQVIDDTKQCTLASASTMHKSLSKEFEYSAGPTIE 117
Query: 181 AAKKIGEEIAKSCLAKGISKVAFDRGGFVYHGRIKALADSAREHGLDF 324 A+KIGE IAKSCL KGI+KV FDRGGF+YHGRIKALADSAREHGL+F Sbjct: 118 IAQKIGEVIAKSCLEKGITKVVFDRGGFLYHGRIKALADSAREHGLEF 165
>tr|Q10B70|Q10B70_ORYSJ 50S ribosomal protein L18, chloroplast, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g61260 PE=4 SV=1 Length = 169
Score = 169 bits (427), Expect = 8e-41 Identities = 83/108 (76%), Positives = 98/108 (90%) Frame = +1
Query: 1 RIRKKLSGTTERPRLAVFRSNQYMYAQVIDDTKGCTLVSASTIHKSLRDELNLTAGPTVD 180 R+RKK+SGTTERPRL+VFRSN+++YAQVIDDTK CTLVSAST+HKSL +L +AGPT + Sbjct: 63 RLRKKVSGTTERPRLSVFRSNKHLYAQVIDDTKSCTLVSASTMHKSLSKDLEYSAGPT-E 121
Query: 181 AAKKIGEEIAKSCLAKGISKVAFDRGGFVYHGRIKALADSAREHGLDF 324 A+KIGE IAKSCL KGI+KV FDRGGF+YHGRIKALAD+ARE+GLDF Sbjct: 122 VAQKIGEVIAKSCLEKGITKVVFDRGGFLYHGRIKALADAARENGLDF 169
>tr|A9THM6|A9THM6_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_145734 PE=4 SV=1 Length = 129
Score = 166 bits (421), Expect = 4e-40 Identities = 81/108 (75%), Positives = 95/108 (87%) Frame = +1
Query: 1 RIRKKLSGTTERPRLAVFRSNQYMYAQVIDDTKGCTLVSASTIHKSLRDELNLTAGPTVD 180 R+RKKLSGTTERPRLAVFR+NQ++YAQVIDDTK TL +AST+ K +R+ + TAGPT++ Sbjct: 22 RLRKKLSGTTERPRLAVFRTNQHLYAQVIDDTKQHTLAAASTLTKEIRESIEDTAGPTIE 81
Query: 181 AAKKIGEEIAKSCLAKGISKVAFDRGGFVYHGRIKALADSAREHGLDF 324 +AKK+GE I K CL KGISKVAFDRGGFVYHGRIKALAD+ARE GLDF Sbjct: 82 SAKKVGEAIGKLCLEKGISKVAFDRGGFVYHGRIKALADAAREAGLDF 129
>tr|A9SN54|A9SN54_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_58245 PE=4 SV=1 Length = 167
Score = 166 bits (420), Expect = 5e-40 Identities = 82/108 (75%), Positives = 94/108 (87%) Frame = +1
Query: 1 RIRKKLSGTTERPRLAVFRSNQYMYAQVIDDTKGCTLVSASTIHKSLRDELNLTAGPTVD 180 R+RKKLSGTTERPRLAVFR+NQ++YAQVIDDTK TL +AST K +RD + TAGPT+D Sbjct: 60 RLRKKLSGTTERPRLAVFRTNQHLYAQVIDDTKQHTLAAASTRTKEIRDTIEDTAGPTID 119
Query: 181 AAKKIGEEIAKSCLAKGISKVAFDRGGFVYHGRIKALADSAREHGLDF 324 +AKK+GE I K CL KGI+KVAFDRGGFVYHGRIKALAD+ARE GLDF Sbjct: 120 SAKKVGEAIGKLCLEKGITKVAFDRGGFVYHGRIKALADAAREAGLDF 167
>tr|A9NTM2|A9NTM2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 178
Score = 166 bits (419), Expect = 7e-40 Identities = 81/108 (75%), Positives = 95/108 (87%) Frame = +1
Query: 1 RIRKKLSGTTERPRLAVFRSNQYMYAQVIDDTKGCTLVSASTIHKSLRDELNLTAGPTVD 180 RIRKK+ GT ERPRLAVFRSN+++Y QVIDDTK TL SAST+ K L +EL+LT+GPT++ Sbjct: 71 RIRKKVEGTPERPRLAVFRSNKHLYCQVIDDTKMHTLASASTMQKPLSEELDLTSGPTIE 130
Query: 181 AAKKIGEEIAKSCLAKGISKVAFDRGGFVYHGRIKALADSAREHGLDF 324 AA+K+GE IAK+CL KGI+KVAFDRGGF YHGRIKALADSARE GLDF Sbjct: 131 AARKVGETIAKACLEKGINKVAFDRGGFKYHGRIKALADSAREQGLDF 178
>tr|A3APA8|A3APA8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_012630 PE=4 SV=1 Length = 184
Score = 165 bits (418), Expect = 9e-40 Identities = 84/122 (68%), Positives = 99/122 (81%), Gaps = 14/122 (11%) Frame = +1
Query: 1 RIRKKLSGTTERPRLAVFRSNQYMYAQVIDDTKGCTLVSASTIHKSLRDELNLTAGPTV- 177 R+RKK+SGTTERPRL+VFRSN+++YAQVIDDTK CTLVSAST+HKSL +L +AGPTV Sbjct: 63 RLRKKVSGTTERPRLSVFRSNKHLYAQVIDDTKSCTLVSASTMHKSLSKDLEYSAGPTVY 122
Query: 178 -------------DAAKKIGEEIAKSCLAKGISKVAFDRGGFVYHGRIKALADSAREHGL 318 + A+KIGE IAKSCL KGI+KV FDRGGF+YHGRIKALAD+ARE+GL Sbjct: 123 MVLSSTYKLNVPQEVAQKIGEVIAKSCLEKGITKVVFDRGGFLYHGRIKALADAARENGL 182
Query: 319 DF 324 DF Sbjct: 183 DF 184
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