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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919269
Clone id YMU001_000123_B06
Library
Length 491
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000123_B06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTCACCAACATGTACAAATCAATAAGCCCTCCAGCTTCACATTGAAGGGAACTATTACC
TACAGAGGAAATTGAAAGATCGGGTCAAAAATTCCACTGATACATGTTTCAATAAAAGGA
ATGGGGGCTTGTAATGTTACAGAAACCAGTGGCTCAAGACTCTGCAATGTTACAATAATC
CCGTGGCTCAAATGCTCTTCCAAAGAACTTGAAGCTACCTATCGAATAGCGTGATAATGG
ACTGCGACTCGCTTTGGAGGAAGCTTTCGCAATATAAACAGCACTAGTGATGCTGGAATA
ATCTCAACAATCACGTAGTAGAAAAGATTGAGAATTGGGTGGTATAAGGAATCAACATCT
CCCATGTCGTTGAAGGCAGCCCATGCTGCCACAACTGCCCTGATTAGAAAGCATGTGAAG
CAGATTGCTGTTACAAAGCCCACCTCTCGGAGTTTCTTCTGACGACCTTTGGATTCTATT
GGAAACCTTCT
■■Homology search results ■■ -
sp_hit_id O51451
Definition sp|O51451|SECY_BORBU Preprotein translocase subunit secY OS=Borrelia burgdorferi
Align length 124
Score (bit) 33.1
E-value 0.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919269|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_B06.
         (491 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O51451|SECY_BORBU Preprotein translocase subunit secY OS=Borr...    33   0.70 
sp|Q6AZD1|T179A_DANRE Transmembrane protein 179 OS=Danio rerio G...    33   0.92 
sp|Q7SY31|TM206_DANRE Transmembrane protein 206 OS=Danio rerio G...    31   2.7  
sp|P20620|NIFD_METTL Nitrogenase molybdenum-iron protein alpha c...    31   2.7  
sp|Q63202|ADAM2_RAT Disintegrin and metalloproteinase domain-con...    30   4.5  
sp|Q82TU0|GPMA2_NITEU 2,3-bisphosphoglycerate-dependent phosphog...    30   5.9  

>sp|O51451|SECY_BORBU Preprotein translocase subunit secY
           OS=Borrelia burgdorferi GN=secY PE=3 SV=1
          Length = 434

 Score = 33.1 bits (74), Expect = 0.70
 Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 3/124 (2%)
 Frame = -1

Query: 467 GRQKKLREVGFVTA-ICFTCFLIRAVVAAWAAFNDMGDVDSLYHPILNLFYYVIVEIIPA 291
           G Q   R VG  T+ I F+  ++R   A +  F  M D     +P+   F  +I+ I   
Sbjct: 167 GEQINQRGVGNGTSLIIFSGIVVRLQAALFNLFQSMQDPSQNVNPV---FVILIISIFIL 223

Query: 290 SLVLFILRKLPPKRVAVHYHAI--R*VASSSLEEHLSHGIIVTLQSLEPLVSVTLQAPIP 117
            ++L I       R+A+HY         SS L   L+   ++ +     L+++ LQ    
Sbjct: 224 VVILIIYEYKAQMRIAIHYARANSNNTVSSYLPIKLNPSGVLPVIFASVLITLPLQILSG 283

Query: 116 FIET 105
           F ET
Sbjct: 284 FAET 287


>sp|Q6AZD1|T179A_DANRE Transmembrane protein 179 OS=Danio rerio
           GN=tmem179 PE=2 SV=1
          Length = 232

 Score = 32.7 bits (73), Expect = 0.92
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = -1

Query: 491 RRFPIESKGRQKKLREVGFVTAICFTCFLIRAVVAAWAAFNDM--GDVDSLYHPILNLFY 318
           +RF +E  G +   R + FV  +     LI + V AW  F  +  G  DSL+H  LNL  
Sbjct: 57  QRFIVEEWGPESSCRFITFVGIVS----LILSAVQAWRTFFFLCKGHDDSLFHSFLNLLL 112

Query: 317 YVIV 306
            ++V
Sbjct: 113 SLLV 116


>sp|Q7SY31|TM206_DANRE Transmembrane protein 206 OS=Danio rerio
           GN=tmem206 PE=2 SV=1
          Length = 298

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -1

Query: 431 TAICFTCFLIRAVVAAWAAFNDMGD-VDSLYHPILNLFYYVIVEIIPASLVLF 276
           T I    +L    VA + A+  + D +D L HP++++ Y  + E     +VLF
Sbjct: 15  TVILVLIYLALTAVAVFLAYQTISDFMDKLNHPVMSVSYKEVEEFAAPGIVLF 67


>sp|P20620|NIFD_METTL Nitrogenase molybdenum-iron protein alpha
           chain OS=Methanococcus thermolithotrophicus GN=nifD PE=3
           SV=1
          Length = 478

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 106 VSIKGMGACNVTETSGSRLCNVTIIPWLKCSSKE 207
           ++I   G C V+++ G  + N+T   WLK   KE
Sbjct: 159 IAINSPGFCGVSQSKGHHVFNMTFYKWLKLKRKE 192


>sp|Q63202|ADAM2_RAT Disintegrin and metalloproteinase
           domain-containing protein 2 OS=Rattus norvegicus
           GN=Adam2 PE=2 SV=2
          Length = 737

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 17/58 (29%), Positives = 25/58 (43%)
 Frame = -1

Query: 272 LRKLPPKRVAVHYHAIR*VASSSLEEHLSHGIIVTLQSLEPLVSVTLQAPIPFIETCI 99
           +R + P+R   HY  I  V    + EH+     V  Q +  L+ +T     PF  T I
Sbjct: 173 IRSIKPQRTVSHYLEIHIVVEKQMFEHIGADTAVVTQKIFQLIGLTNAIFAPFNLTVI 230


>sp|Q82TU0|GPMA2_NITEU 2,3-bisphosphoglycerate-dependent
           phosphoglycerate mutase 2 OS=Nitrosomonas europaea
           GN=gpmA2 PE=3 SV=1
          Length = 249

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = -1

Query: 476 ESKGRQKKLREVGFVTAICFTCFLIRAVVAAWAAFNDMGDVDSLYHPI 333
           E++   + LRE GF   I +T  L RA+   W A ++M   D ++ PI
Sbjct: 35  EAEEAGRLLRENGFSFDIAYTSLLKRAIRTLWIALDEM---DQMWTPI 79
tr_hit_id Q402F2
Definition tr|Q402F2|Q402F2_SOLLC Tobamovirus multiplication 1 homolog OS=Solanum lycopersicum
Align length 90
Score (bit) 130.0
E-value 3.0e-29
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919269|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_B06.
         (491 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q402F2|Q402F2_SOLLC Tobamovirus multiplication 1 homolog OS=S...   130   3e-29
tr|Q402F3|Q402F3_TOBAC Tobamovirus multiplication 3 OS=Nicotiana...   130   3e-29
tr|A9TR81|A9TR81_PHYPA Predicted protein OS=Physcomitrella paten...   129   6e-29
tr|Q9MA29|Q9MA29_ARATH T5E21.3 OS=Arabidopsis thaliana PE=4 SV=1      129   7e-29
tr|Q9M9R0|Q9M9R0_ARATH F14L17.31 protein OS=Arabidopsis thaliana...   129   7e-29
tr|Q9FEG2|Q9FEG2_ARATH TOM1 protein (Putative uncharacterized pr...   129   7e-29
tr|Q948R8|Q948R8_ARATH THH1 (At1g14530) OS=Arabidopsis thaliana ...   129   7e-29
tr|Q8LFE7|Q8LFE7_ARATH Putative uncharacterized protein OS=Arabi...   129   7e-29
tr|Q84WT2|Q84WT2_ARATH Putative uncharacterized protein At1g1453...   129   7e-29
tr|Q402F1|Q402F1_SOLLC Tobamovirus multiplication 1 homolog 2 OS...   129   7e-29
tr|A7R0M6|A7R0M6_VITVI Chromosome chr10 scaffold_312, whole geno...   129   7e-29
tr|A5AGX0|A5AGX0_VITVI Putative uncharacterized protein OS=Vitis...   129   7e-29
tr|Q9ZUM2|Q9ZUM2_ARATH Expressed protein (Putative uncharacteriz...   129   1e-28
tr|Q8LF52|Q8LF52_ARATH Putative uncharacterized protein OS=Arabi...   129   1e-28
tr|A9TIE5|A9TIE5_PHYPA Predicted protein OS=Physcomitrella paten...   129   1e-28
tr|B7FJ33|B7FJ33_MEDTR Putative uncharacterized protein OS=Medic...   128   1e-28
tr|A9TR80|A9TR80_PHYPA Predicted protein (Fragment) OS=Physcomit...   127   2e-28
tr|B8BI15|B8BI15_ORYSI Putative uncharacterized protein OS=Oryza...   127   3e-28
tr|Q402F0|Q402F0_SOLLC Tobamovirus multiplication 1 homolog 3 OS...   127   4e-28
tr|Q005X6|Q005X6_BRACM Putative uncharacterized protein OS=Brass...   127   4e-28
tr|Q94LE0|Q94LE0_ORYSA Putative uncharacterized protein OSJNBa00...   125   8e-28
tr|Q8LNN5|Q8LNN5_ORYSJ Os10g0537500 protein OS=Oryza sativa subs...   125   8e-28
tr|Q402E9|Q402E9_CUCME Tobamovirus multiplication 1 homolog OS=C...   125   8e-28
tr|Q10I38|Q10I38_ORYSJ Tobamovirus multiplication protein 3, put...   125   8e-28
tr|Q10I37|Q10I37_ORYSJ Tobamovirus multiplication protein 3, put...   125   8e-28
tr|B8AKV4|B8AKV4_ORYSI Putative uncharacterized protein OS=Oryza...   125   8e-28
tr|B6ETQ9|B6ETQ9_NICBE TOM1 protein (Fragment) OS=Nicotiana bent...   125   8e-28
tr|B4FVV5|B4FVV5_MAIZE Putative uncharacterized protein OS=Zea m...   125   8e-28
tr|A7PNI4|A7PNI4_VITVI Chromosome chr1 scaffold_22, whole genome...   124   2e-27
tr|Q402F4|Q402F4_TOBAC Tobamovirus multiplication 1 OS=Nicotiana...   124   2e-27

>tr|Q402F2|Q402F2_SOLLC Tobamovirus multiplication 1 homolog
           OS=Solanum lycopersicum GN=LeTH1 PE=2 SV=1
          Length = 295

 Score =  130 bits (328), Expect = 3e-29
 Identities = 59/90 (65%), Positives = 74/90 (82%)
 Frame = -1

Query: 491 RRFPIESKGRQKKLREVGFVTAICFTCFLIRAVVAAWAAFNDMGDVDSLYHPILNLFYYV 312
           RRFP+ES+GRQKKL+EVG+VT ICF+CFLIR ++  + AF+   D+D LYHP+LN  YY+
Sbjct: 206 RRFPVESRGRQKKLQEVGYVTTICFSCFLIRCIMMCFNAFDKAADLDVLYHPMLNFVYYL 265

Query: 311 IVEIIPASLVLFILRKLPPKRVAVHYHAIR 222
           +VEI+P+SLVLFILRKLPPKR    YH IR
Sbjct: 266 LVEILPSSLVLFILRKLPPKRGITQYHPIR 295


>tr|Q402F3|Q402F3_TOBAC Tobamovirus multiplication 3 OS=Nicotiana
           tabacum GN=NtTOM3 PE=2 SV=1
          Length = 294

 Score =  130 bits (327), Expect = 3e-29
 Identities = 61/90 (67%), Positives = 74/90 (82%)
 Frame = -1

Query: 491 RRFPIESKGRQKKLREVGFVTAICFTCFLIRAVVAAWAAFNDMGDVDSLYHPILNLFYYV 312
           +RFP+ESKGR+KKL+EVG+VT ICF+CFLIR V+  + AFN   D+D L HPILNL YY+
Sbjct: 205 QRFPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCFNAFNKAADLDVLDHPILNLIYYL 264

Query: 311 IVEIIPASLVLFILRKLPPKRVAVHYHAIR 222
           +VEI+P+SLVLFILRKLPPKR    YH IR
Sbjct: 265 LVEILPSSLVLFILRKLPPKRGITQYHPIR 294


>tr|A9TR81|A9TR81_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_149357 PE=4 SV=1
          Length = 275

 Score =  129 bits (325), Expect = 6e-29
 Identities = 63/90 (70%), Positives = 72/90 (80%)
 Frame = -1

Query: 491 RRFPIESKGRQKKLREVGFVTAICFTCFLIRAVVAAWAAFNDMGDVDSLYHPILNLFYYV 312
           RRFPIESKGR+KKLREVG VTAICF CF IR+ + A++ FN   D+D LYHPILN  YY 
Sbjct: 186 RRFPIESKGRRKKLREVGCVTAICFICFTIRSFIMAFSVFNKAMDLDVLYHPILNGIYYT 245

Query: 311 IVEIIPASLVLFILRKLPPKRVAVHYHAIR 222
           +VEIIP++LVLFILRKLPPKR    YH IR
Sbjct: 246 VVEIIPSALVLFILRKLPPKRPPGQYHPIR 275


>tr|Q9MA29|Q9MA29_ARATH T5E21.3 OS=Arabidopsis thaliana PE=4 SV=1
          Length = 328

 Score =  129 bits (324), Expect = 7e-29
 Identities = 59/90 (65%), Positives = 74/90 (82%)
 Frame = -1

Query: 491 RRFPIESKGRQKKLREVGFVTAICFTCFLIRAVVAAWAAFNDMGDVDSLYHPILNLFYYV 312
           +RFP+ESKGR+KKL+EVG+VT ICFTCFLIR ++  + AF+D  D+D L HPILN  YY+
Sbjct: 239 QRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNFIYYL 298

Query: 311 IVEIIPASLVLFILRKLPPKRVAVHYHAIR 222
           +VEI+P+SLVLFILRKLPPKR    YH I+
Sbjct: 299 LVEILPSSLVLFILRKLPPKRGITQYHQIQ 328


>tr|Q9M9R0|Q9M9R0_ARATH F14L17.31 protein OS=Arabidopsis thaliana
           GN=F14L17.31 PE=4 SV=1
          Length = 343

 Score =  129 bits (324), Expect = 7e-29
 Identities = 59/90 (65%), Positives = 74/90 (82%)
 Frame = -1

Query: 491 RRFPIESKGRQKKLREVGFVTAICFTCFLIRAVVAAWAAFNDMGDVDSLYHPILNLFYYV 312
           +RFP+ESKGR+KKL+EVG+VT ICFTCFLIR ++  + AF+D  D+D L HPILN  YY+
Sbjct: 254 QRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNFIYYL 313

Query: 311 IVEIIPASLVLFILRKLPPKRVAVHYHAIR 222
           +VEI+P+SLVLFILRKLPPKR    YH I+
Sbjct: 314 LVEILPSSLVLFILRKLPPKRGITQYHQIQ 343


>tr|Q9FEG2|Q9FEG2_ARATH TOM1 protein (Putative uncharacterized
           protein At4g21790) OS=Arabidopsis thaliana GN=TOM1 PE=2
           SV=1
          Length = 291

 Score =  129 bits (324), Expect = 7e-29
 Identities = 62/90 (68%), Positives = 75/90 (83%)
 Frame = -1

Query: 491 RRFPIESKGRQKKLREVGFVTAICFTCFLIRAVVAAWAAFNDMGDVDSLYHPILNLFYYV 312
           RRFPIESKGR+KKL EVG VTAICFTCFLIR VV A +AF+    +D L HP+LNL YY+
Sbjct: 202 RRFPIESKGRRKKLHEVGSVTAICFTCFLIRCVVVAVSAFDKDLTLDVLDHPVLNLIYYM 261

Query: 311 IVEIIPASLVLFILRKLPPKRVAVHYHAIR 222
           +VE++P++LVLFILRKLPPKRV+  YH I+
Sbjct: 262 VVEVLPSALVLFILRKLPPKRVSAQYHPIQ 291


>tr|Q948R8|Q948R8_ARATH THH1 (At1g14530) OS=Arabidopsis thaliana
           GN=THH1 PE=2 SV=1
          Length = 293

 Score =  129 bits (324), Expect = 7e-29
 Identities = 59/90 (65%), Positives = 74/90 (82%)
 Frame = -1

Query: 491 RRFPIESKGRQKKLREVGFVTAICFTCFLIRAVVAAWAAFNDMGDVDSLYHPILNLFYYV 312
           +RFP+ESKGR+KKL+EVG+VT ICFTCFLIR ++  + AF+D  D+D L HPILN  YY+
Sbjct: 204 QRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNFIYYL 263

Query: 311 IVEIIPASLVLFILRKLPPKRVAVHYHAIR 222
           +VEI+P+SLVLFILRKLPPKR    YH I+
Sbjct: 264 LVEILPSSLVLFILRKLPPKRGITQYHQIQ 293


>tr|Q8LFE7|Q8LFE7_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 285

 Score =  129 bits (324), Expect = 7e-29
 Identities = 59/90 (65%), Positives = 74/90 (82%)
 Frame = -1

Query: 491 RRFPIESKGRQKKLREVGFVTAICFTCFLIRAVVAAWAAFNDMGDVDSLYHPILNLFYYV 312
           +RFP+ESKGR+KKL+EVG+VT ICFTCFLIR ++  + AF+D  D+D L HPILN  YY+
Sbjct: 196 QRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNFIYYL 255

Query: 311 IVEIIPASLVLFILRKLPPKRVAVHYHAIR 222
           +VEI+P+SLVLFILRKLPPKR    YH I+
Sbjct: 256 LVEILPSSLVLFILRKLPPKRGITQYHQIQ 285


>tr|Q84WT2|Q84WT2_ARATH Putative uncharacterized protein At1g14530
           OS=Arabidopsis thaliana GN=At1g14530 PE=2 SV=1
          Length = 293

 Score =  129 bits (324), Expect = 7e-29
 Identities = 59/90 (65%), Positives = 74/90 (82%)
 Frame = -1

Query: 491 RRFPIESKGRQKKLREVGFVTAICFTCFLIRAVVAAWAAFNDMGDVDSLYHPILNLFYYV 312
           +RFP+ESKGR+KKL+EVG+VT ICFTCFLIR ++  + AF+D  D+D L HPILN  YY+
Sbjct: 204 QRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNFIYYL 263

Query: 311 IVEIIPASLVLFILRKLPPKRVAVHYHAIR 222
           +VEI+P+SLVLFILRKLPPKR    YH I+
Sbjct: 264 LVEILPSSLVLFILRKLPPKRGITQYHQIQ 293


>tr|Q402F1|Q402F1_SOLLC Tobamovirus multiplication 1 homolog 2
           OS=Solanum lycopersicum GN=LeTH2 PE=2 SV=1
          Length = 297

 Score =  129 bits (324), Expect = 7e-29
 Identities = 62/90 (68%), Positives = 73/90 (81%)
 Frame = -1

Query: 491 RRFPIESKGRQKKLREVGFVTAICFTCFLIRAVVAAWAAFNDMGDVDSLYHPILNLFYYV 312
           RRFPIES+GRQKKL EVGFVT IC  CF+IR V+ A +AFN   DVD + HP+L LFYYV
Sbjct: 208 RRFPIESRGRQKKLHEVGFVTGICCICFMIRCVMVAVSAFNGNADVDVIDHPVLILFYYV 267

Query: 311 IVEIIPASLVLFILRKLPPKRVAVHYHAIR 222
           +VEI+P+ LVLFILRKLPPKRV+  YH I+
Sbjct: 268 VVEILPSVLVLFILRKLPPKRVSEQYHPIQ 297