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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919272
Clone id YMU001_000123_B09
Library
Length 485
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000123_B09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATACAAGCAATTACGTACGCCATTACTTGTGGCGTTTACATTTTCGATAGCATCGAGAGA
ATGTGTGTGCCGATATTATCACCACTGGCTTGGTTCCAGATCCTGCCAGAAATACCGGCA
CTAGCTATGTTTAAAAGAAAAAAGAAATTGGTGCTTTGCAAGAGTTCTTGTCAAGACTCC
TGCACACCTGCAATAAACTCACTTTCATCATCTAAAATCCCATACACAATTATATCACTA
GACAAACCCCTCAAGAAACCGTGCACAACTCTTTTTCGCAGCAAAATACAAGTACAAAGT
ATTTGCTCAAATGACAAGTATAGAACATTTGCTTAATATAACTTGGTTTACAATTGTCTA
TATACAAAATTTCAAATCAAAAGTATTTTTATCTAAAAAGTTGGTTTAAAGAACTAGAAA
CTAACTAGGAGCCATCTCCTTTATCCTCATCTTTGTCCTTGTCGCTTTGCATCTCCTCCC
TGCCC
■■Homology search results ■■ -
sp_hit_id Q9VW60
Definition sp|Q9VW60|ADCY2_DROME Adenylate cyclase type 2 OS=Drosophila melanogaster
Align length 48
Score (bit) 31.6
E-value 2.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919272|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_B09.
         (485 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9VW60|ADCY2_DROME Adenylate cyclase type 2 OS=Drosophila mel...    32   2.0  
sp|Q6PIJ4|NFRKB_MOUSE Nuclear factor related to kappa-B-binding ...    30   5.7  
sp|O67139|SELD_AQUAE Selenide, water dikinase OS=Aquifex aeolicu...    30   7.5  
sp|Q2TL60|ZN667_MOUSE Zinc finger protein 667 OS=Mus musculus GN...    29   9.8  
sp|Q04562|YD107_YEAST Transmembrane 9 superfamily protein YDR107...    29   9.8  
sp|Q06496|NPT2A_RAT Sodium-dependent phosphate transport protein...    29   9.8  
sp|Q04654|ATP6_VICFA ATP synthase subunit a OS=Vicia faba GN=ATP...    29   9.8  

>sp|Q9VW60|ADCY2_DROME Adenylate cyclase type 2 OS=Drosophila
            melanogaster GN=Ac76E PE=2 SV=3
          Length = 1307

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 19/48 (39%), Positives = 26/48 (54%)
 Frame = +2

Query: 179  PAHLQ*THFHHLKSHTQLYH*TNPSRNRAQLFFAAKYKYKVFAQMTSI 322
            PAH+  THF HL+  T+LYH    S +   + FA+   YK F   T +
Sbjct: 1085 PAHVA-THFLHLERSTELYH---ESYSCVAVMFASIPNYKEFYDETDV 1128


>sp|Q6PIJ4|NFRKB_MOUSE Nuclear factor related to kappa-B-binding
           protein OS=Mus musculus GN=Nfrkb PE=2 SV=1
          Length = 1296

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 8/52 (15%)
 Frame = +1

Query: 133 KRKKKLVLCKSSCQD-----SCTPAINSLSSSKIPYTIISL-DKPLK--KPC 264
           K+KKK+ L KS  +D     S T  + +LS +  P  I S+ ++PL+  KPC
Sbjct: 318 KKKKKIKLIKSEAEDLAEPLSSTEGVPTLSQAPSPLAISSIKEEPLEDIKPC 369


>sp|O67139|SELD_AQUAE Selenide, water dikinase OS=Aquifex aeolicus
           GN=selD PE=1 SV=3
          Length = 336

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = -1

Query: 287 ILLRKRVVHGFL-RGLSSDIIVYGILDDESEFIAGVQES*QELLQSTNFFFLLNIASAGI 111
           ++L K +  G L +GL   I+    +++  E +  + +  + L+ S +     ++   G+
Sbjct: 166 LILTKPIGTGILIKGLKEGILKEEDINEAIENMLALNDKARNLMLSLDATACTDVTGFGL 225

Query: 110 SGRIWNQASGDNIGTHI 60
            G  WN     NIG  I
Sbjct: 226 LGHAWNICKNSNIGARI 242


>sp|Q2TL60|ZN667_MOUSE Zinc finger protein 667 OS=Mus musculus
           GN=Znf667 PE=1 SV=1
          Length = 609

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +1

Query: 133 KRKKKLVLCKSSCQDSCTPAINSLSSSKIPYTIISLDKPLK-KPCTTLF 276
           KRKKKL+ CK      C      + + K+   I S +KP K   C+ +F
Sbjct: 408 KRKKKLIACK-----ECGKMFGGMKNLKVHLNIHSEEKPFKCNKCSKVF 451


>sp|Q04562|YD107_YEAST Transmembrane 9 superfamily protein YDR107C
           OS=Saccharomyces cerevisiae GN=YDR107C PE=1 SV=1
          Length = 672

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -1

Query: 341 LY*ANVLYLSFEQILCTCILLRKRVVHGFLRGLSSDIIVYGILDDESEF 195
           +Y   + + S        ILL   V+H  LR L SD+  Y  L+ ++EF
Sbjct: 303 IYDPQIQWFSLINFSVIVILLSSVVMHSLLRALKSDLARYNELNLDNEF 351


>sp|Q06496|NPT2A_RAT Sodium-dependent phosphate transport protein 2A
           OS=Rattus norvegicus GN=Slc34a1 PE=1 SV=1
          Length = 637

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
 Frame = -1

Query: 302 ILCTCILLRKRVVHGFLRGLSSDIIVYGILDD--------ESEFIAGVQES*QELLQSTN 147
           +LCTC++L  ++++  L+G  +++I   I  D           F   V  S   ++QS++
Sbjct: 359 VLCTCLILLVKMLNSLLKGQVANVIQKVINTDFPAPFTWVTGYFAMVVGASMTFVVQSSS 418

Query: 146 FFF-----LLNIASAGISGRIWNQASGDNIGTHILSMLSKM*TPQ 27
            F      L+ +    I  R +    G NIGT   ++L+ + +P+
Sbjct: 419 VFTSAITPLIGLGVISIE-RAYPLTLGSNIGTTTTAILAALASPR 462


>sp|Q04654|ATP6_VICFA ATP synthase subunit a OS=Vicia faba GN=ATP6
           PE=3 SV=1
          Length = 291

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +1

Query: 1   IQAITYAITCGVYIFDSIERMCVPILSPLAWFQILPEIP 117
           +Q   Y     +Y++  +E   VPI SPL  F+I+P +P
Sbjct: 5   LQLDLYLYNDNLYLYLYLESGVVPIPSPLEQFEIIPFLP 43
tr_hit_id A7VH57
Definition tr|A7VH57|A7VH57_9CLOT Putative uncharacterized protein OS=Clostridium sp. L2-50
Align length 55
Score (bit) 35.8
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919272|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_B09.
         (485 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7VH57|A7VH57_9CLOT Putative uncharacterized protein OS=Clost...    36   1.1  
tr|B0NI40|B0NI40_EUBSP Putative uncharacterized protein OS=Clost...    34   4.1  
tr|A0E8T5|A0E8T5_PARTE Chromosome undetermined scaffold_83, whol...    33   9.1  

>tr|A7VH57|A7VH57_9CLOT Putative uncharacterized protein
           OS=Clostridium sp. L2-50 GN=CLOL250_02254 PE=4 SV=1
          Length = 611

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 124 AMFKRKKKLVL-CKSSCQDSCTPAINSLSSSKIPYTIISLDKPLKKPCTTLFRSK 285
           A F    KLV  CKS  +   T  IN +SS K+  +I + DK  KKP  T+  SK
Sbjct: 412 ATFSADGKLVTKCKSCGETLSTKKINKISSVKLSKSIYTYDKKAKKPTVTVKDSK 466


>tr|B0NI40|B0NI40_EUBSP Putative uncharacterized protein
           OS=Clostridium scindens ATCC 35704 GN=CLOSCI_03156 PE=4
           SV=1
          Length = 725

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 23/84 (27%), Positives = 38/84 (45%)
 Frame = -1

Query: 317 LSFEQILCTCILLRKRVVHGFLRGLSSDIIVYGILDDESEFIAGVQES*QELLQSTNFFF 138
           LSF   L T +++         R + + II YG  +    F     +      ++  +FF
Sbjct: 369 LSFGYTLLTGVIINLLAGVWMSRSMLNSIIRYGFFNQGKWFCKKRDKKVLHFTEAKRYFF 428

Query: 137 LLNIASAGISGRIWNQASGDNIGT 66
           L +IA   +SG IW+ A+G  + T
Sbjct: 429 LASIAVI-VSGTIWSAANGVKLDT 451


>tr|A0E8T5|A0E8T5_PARTE Chromosome undetermined scaffold_83, whole
            genome shotgun sequence OS=Paramecium tetraurelia
            GN=GSPATT00024432001 PE=4 SV=1
          Length = 2251

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 35/129 (27%), Positives = 51/129 (39%), Gaps = 17/129 (13%)
 Frame = +1

Query: 22   ITCGVYIFDSIERMCVPILSPLAWFQILPEIPAL----AMFKRKKKL-----------VL 156
            ITC +      + +C+  +    W  ++ E   L    A+F ++K              L
Sbjct: 1040 ITCDINCLQCNKGVCISCVQGYKWDSLIQECVKLCGDSAIFNQEKVCEDGNNQLDDGCYL 1099

Query: 157  CKSSCQDSCT--PAINSLSSSKIPYTIISLDKPLKKPCTTLFRSKIQVQSICSNDKYRTF 330
            C+ SCQDSCT   A   L  + I +    LD+ L+  C T     I VQ     D     
Sbjct: 1100 CQLSCQDSCTLCSANGCLECNTIGW---KLDE-LQNKCETNCGDGITVQYYEECDDLIDQ 1155

Query: 331  A*YNLVYNC 357
              Y+  YNC
Sbjct: 1156 NCYHCKYNC 1164