BP919279
Clone id YMU001_000123_C04
Library
Length 459
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000123_C04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AAACAAACTTGCAGCTGCAAAACCAAGTCCATGCCAAGCGAGTATTATACTTGAAAGAGG
TATTGTTTCGGGGGTGGGTGTTCGACTCAACCTCGACCACTCATGTAAGAATCGAGAGAT
TCATTTATAACCCGATGGGGCATTGCTGTGAAACAAACATGTTGACACATATGAGGGGCC
ATGAGCAGGCCTGACACATTAGATATCCAGATATTGATACAAAACCATTAGATGTTAGCA
AGAAGGAAAAGGCAAAGTCTTGCTTCTCTAATAGAGGTTGTGAGATCCACTTGACAACTA
CGACACCCACCTGACCTACCCCATATAGGGAAAGAAAAGCAAGATTTAGGCTCATTCAGG
ACATAAGGGAAACATGAAGGAGAAATGTACATATACGCTGCCTCTGATCTCCCAATAACA
GGCTGACTAACAGCATTTCAATCCTACCACAGTCCCAAT
■■Homology search results ■■ -
sp_hit_id Q9UT43
Definition sp|Q9UT43|YFRD_SCHPO Putative phospholipid-transporting ATPase C821.13c OS=Schizosaccharomyces pombe
Align length 91
Score (bit) 35.0
E-value 0.16
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919279|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_C04.
(459 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9UT43|YFRD_SCHPO Putative phospholipid-transporting ATPase C... 35 0.16
sp|A0JNG0|TM168_BOVIN Transmembrane protein 168 OS=Bos taurus GN... 31 2.3
sp|Q9P1A6|DLGP2_HUMAN Disks large-associated protein 2 OS=Homo s... 29 8.5

>sp|Q9UT43|YFRD_SCHPO Putative phospholipid-transporting ATPase
C821.13c OS=Schizosaccharomyces pombe GN=SPAC821.13c PE=1
SV=2
Length = 1562

Score = 35.0 bits (79), Expect = 0.16
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = -3

Query: 265 KQDFAFSFLLTSNGFVSISGYLMCQACSWPLICVNMFVSQQCPIGL*M---NLSILT*VV 95
K+ F F FV +G + + SW L C N S C IGL + +LS T +
Sbjct: 1307 KEQFFFLMQAIMQPFVGYTGQSLYE--SWGLTCFNTLFSSLCVIGLGIFEKDLSASTVIA 1364

Query: 94 EVESNTHPRNNTSFKYNTRLAWTWFCSCKFV 2
E NN +F + W CS F+
Sbjct: 1365 VPELYQKGINNEAFNWRVYFGW---CSIAFI 1392


>sp|A0JNG0|TM168_BOVIN Transmembrane protein 168 OS=Bos taurus
GN=TMEM168 PE=2 SV=1
Length = 697

Score = 31.2 bits (69), Expect = 2.3
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2

Query: 248 FLLANI*WF-CINIWISNVSGLLMAPHMCQHVCFTAMPHRVINESLDSYMSGRG 90
F + I W C I++ + G + C VCFT HRV N SLD M+ +G
Sbjct: 298 FSIFGIFWMICHIIFLLTLWGFHTKLNDCHKVCFT---HRVDNNSLDRIMASKG 348


>sp|Q9P1A6|DLGP2_HUMAN Disks large-associated protein 2 OS=Homo
sapiens GN=DLGAP2 PE=1 SV=4
Length = 1054

Score = 29.3 bits (64), Expect = 8.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1

Query: 367 GKHEGEMYIYAASDLPITG*LTAFQSYHSP 456
G+H+ + Y+ AASD+P+ L +Y+SP
Sbjct: 476 GEHQTQTYLQAASDVPVGHSLDPAANYNSP 505


tr_hit_id B0C3E6
Definition tr|B0C3E6|B0C3E6_ACAM1 High light inducible protein OS=Acaryochloris marina (strain MBIC 11017)
Align length 77
Score (bit) 37.4
E-value 0.37
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919279|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_C04.
(459 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B0C3E6|B0C3E6_ACAM1 High light inducible protein OS=Acaryochl... 37 0.37
tr|Q6Q974|Q6Q974_ACAMR Chlorophyll d binding protein OS=Acaryoch... 37 0.37

>tr|B0C3E6|B0C3E6_ACAM1 High light inducible protein
OS=Acaryochloris marina (strain MBIC 11017) GN=hli PE=4
SV=1
Length = 353

Score = 37.4 bits (85), Expect = 0.37
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = -2

Query: 320 GRSGGCRSCQVDLTTSIREARLCLFLLANI*--WFCINIWISNVSGLLMAPHMCQHVCFT 147
GR GG + Q DL TS+ L+N W+ N+ ++++SG+L+ H+C +
Sbjct: 7 GRRGGKVAVQTDLPTSV---------LSNFENEWWAGNVRMTDLSGMLLGAHLCHAALMS 57

Query: 146 AMPHRVINESLDSYMSG 96
+P I + + Y G
Sbjct: 58 VVPGAFIVQEVARYQPG 74


>tr|Q6Q974|Q6Q974_ACAMR Chlorophyll d binding protein
OS=Acaryochloris marina GN=pcbC PE=4 SV=1
Length = 352

Score = 37.4 bits (85), Expect = 0.37
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = -2

Query: 320 GRSGGCRSCQVDLTTSIREARLCLFLLANI*--WFCINIWISNVSGLLMAPHMCQHVCFT 147
GR GG + Q DL TS+ L+N W+ N+ ++++SG+L+ H+C +
Sbjct: 7 GRRGGKVAVQTDLPTSV---------LSNFENEWWAGNVRMTDLSGMLLGAHLCHAALMS 57

Query: 146 AMPHRVINESLDSYMSG 96
+P I + + Y G
Sbjct: 58 VVPGAFIVQEVARYQPG 74