BP919285 |
Clone id |
YMU001_000123_C11 |
Library |
YMU01 |
Length |
453 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000123_C11. |
Accession |
BP919285 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL796Contig1 |
Sequence |
CTTCCATGAGTTGCTAGAGATTCCACAAGGAGACCGCCGCAAGTACCATGACGATGTCTC AGTAATGATCATATCTTTGGAAGGACGAATATGGCGGTCCTTTGGATGATTGCCACTTTC TGTGCCAACTTTGCAGCCTACAGAAGACTAACCATGTGACTAACCATGTAAAAACTTCTC AAGTGCCATGCACTTTTTTGTACCCTCTTTTTGAAGGGCATACAGATGCAAATGTGGATC ATGGTCATAGCAAAGGTGTCGTCCTTAATATATATACACTCCAGTCTTGACATAGCCGAG CATAAATGTGTACGTGAATACATTCTCGTATGCATATTCTTTGCCATCTTCCCATCCATT TTCTGCAATTTTTGCCATGTCTTGAGTCACTTTGATGCTGCAAAGGATAGGTCTCTATCT GCCTATTTCATGATAAAGATGACGTAGGGCAAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8RWN7 |
Definition |
sp|Q8RWN7|POL_ARATH Protein phosphatase 2C POL OS=Arabidopsis thaliana |
Align length |
35 |
Score (bit) |
70.5 |
E-value |
3.0e-12 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q84TS1 |
Definition |
tr|Q84TS1|Q84TS1_ORYSJ Os03g0372500 protein OS=Oryza sativa subsp. japonica |
Align length |
35 |
Score (bit) |
72.0 |
E-value |
1.0e-11 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919285|Adiantum capillus-veneris mRNA, clone: YMU001_000123_C11. (453 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q84TS1|Q84TS1_ORYSJ Os03g0372500 protein OS=Oryza sativa subs... 72 1e-11 tr|A2XH85|A2XH85_ORYSI Putative uncharacterized protein OS=Oryza... 72 1e-11 tr|A7Q0W9|A7Q0W9_VITVI Chromosome chr7 scaffold_42, whole genome... 70 7e-11 tr|A7PCA4|A7PCA4_VITVI Chromosome chr2 scaffold_11, whole genome... 70 7e-11 tr|A5C2V8|A5C2V8_VITVI Putative uncharacterized protein OS=Vitis... 70 7e-11 tr|A2X8H4|A2X8H4_ORYSI Putative uncharacterized protein OS=Oryza... 67 3e-10 tr|A9U144|A9U144_PHYPA Predicted protein OS=Physcomitrella paten... 67 4e-10 tr|A9S877|A9S877_PHYPA Predicted protein OS=Physcomitrella paten... 67 4e-10 tr|B8Q8C1|B8Q8C1_ORYSI SKIP interacting protein 35 (Fragment) OS... 66 8e-10 tr|A7PNM2|A7PNM2_VITVI Chromosome chr8 scaffold_23, whole genome... 66 8e-10 tr|A7NZ18|A7NZ18_VITVI Chromosome chr6 scaffold_3, whole genome ... 66 8e-10 tr|A5BQ00|A5BQ00_VITVI Putative uncharacterized protein OS=Vitis... 66 8e-10 tr|A2XNG4|A2XNG4_ORYSI Putative uncharacterized protein OS=Oryza... 66 8e-10 tr|A2XZL2|A2XZL2_ORYSI Putative uncharacterized protein OS=Oryza... 64 3e-09 tr|B3VTB3|B3VTB3_SORBI Protein phosphatase type 2C OS=Sorghum bi... 62 1e-08 tr|B8AKR5|B8AKR5_ORYSI Putative uncharacterized protein OS=Oryza... 56 1e-06 tr|A2XF31|A2XF31_ORYSI Putative uncharacterized protein OS=Oryza... 56 1e-06 tr|A3AIE2|A3AIE2_ORYSJ Putative uncharacterized protein OS=Oryza... 50 4e-05 tr|A7QTB9|A7QTB9_VITVI Chromosome chr1 scaffold_166, whole genom... 42 0.020 tr|A5AFY8|A5AFY8_VITVI Putative uncharacterized protein OS=Vitis... 42 0.020 tr|B6T998|B6T998_MAIZE Protein phosphatase 2C containing protein... 38 0.22 tr|A2XT23|A2XT23_ORYSI Putative uncharacterized protein OS=Oryza... 38 0.22 tr|A7NW44|A7NW44_VITVI Chromosome chr5 scaffold_2, whole genome ... 38 0.29 tr|A0CN15|A0CN15_PARTE Chromosome undetermined scaffold_22, whol... 36 0.84 tr|A8MVD4|A8MVD4_HUMAN Putative uncharacterized protein ENSP0000... 33 5.4 tr|Q9SHM4|Q9SHM4_ARATH F7F22.16 OS=Arabidopsis thaliana PE=4 SV=1 33 7.1
>tr|Q84TS1|Q84TS1_ORYSJ Os03g0372500 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0097F01.10 PE=2 SV=1 Length = 977
Score = 72.0 bits (175), Expect = 1e-11 Identities = 32/35 (91%), Positives = 34/35 (97%) Frame = +2
Query: 2 FHELLEIPQGDRRKYHDDVSVMIISLEGRIWRSFG 106 FHELL+IPQGDRRKYHDDVSVM+ISLEGRIWRS G Sbjct: 943 FHELLDIPQGDRRKYHDDVSVMVISLEGRIWRSSG 977
>tr|A2XH85|A2XH85_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11759 PE=4 SV=1 Length = 978
Score = 72.0 bits (175), Expect = 1e-11 Identities = 32/35 (91%), Positives = 34/35 (97%) Frame = +2
Query: 2 FHELLEIPQGDRRKYHDDVSVMIISLEGRIWRSFG 106 FHELL+IPQGDRRKYHDDVSVM+ISLEGRIWRS G Sbjct: 944 FHELLDIPQGDRRKYHDDVSVMVISLEGRIWRSSG 978
>tr|A7Q0W9|A7Q0W9_VITVI Chromosome chr7 scaffold_42, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028211001 PE=4 SV=1 Length = 383
Score = 69.7 bits (169), Expect = 7e-11 Identities = 30/35 (85%), Positives = 33/35 (94%) Frame = +2
Query: 2 FHELLEIPQGDRRKYHDDVSVMIISLEGRIWRSFG 106 FHELL+IP GDRRKYHDDVSVM++SLEGRIWRS G Sbjct: 349 FHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG 383
>tr|A7PCA4|A7PCA4_VITVI Chromosome chr2 scaffold_11, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015783001 PE=4 SV=1 Length = 611
Score = 69.7 bits (169), Expect = 7e-11 Identities = 30/35 (85%), Positives = 34/35 (97%) Frame = +2
Query: 2 FHELLEIPQGDRRKYHDDVSVMIISLEGRIWRSFG 106 FHELL+IPQGDRRKYHDDV+VM+ISLEGRIW+S G Sbjct: 574 FHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSG 608
>tr|A5C2V8|A5C2V8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031357 PE=4 SV=1 Length = 871
Score = 69.7 bits (169), Expect = 7e-11 Identities = 30/35 (85%), Positives = 33/35 (94%) Frame = +2
Query: 2 FHELLEIPQGDRRKYHDDVSVMIISLEGRIWRSFG 106 FHELL+IP GDRRKYHDDVSVM++SLEGRIWRS G Sbjct: 837 FHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG 871
>tr|A2X8H4|A2X8H4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08534 PE=4 SV=1 Length = 596
Score = 67.4 bits (163), Expect = 3e-10 Identities = 29/35 (82%), Positives = 34/35 (97%) Frame = +2
Query: 2 FHELLEIPQGDRRKYHDDVSVMIISLEGRIWRSFG 106 F+ELL+IPQGDRRKYHDDV+VM+ISLEGRIW+S G Sbjct: 559 FYELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSG 593
>tr|A9U144|A9U144_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_227370 PE=4 SV=1 Length = 719
Score = 67.0 bits (162), Expect = 4e-10 Identities = 30/34 (88%), Positives = 33/34 (97%) Frame = +2
Query: 5 HELLEIPQGDRRKYHDDVSVMIISLEGRIWRSFG 106 +ELL+IPQGDRRKYHDDVSVM+ISLEGRIWRS G Sbjct: 680 NELLDIPQGDRRKYHDDVSVMVISLEGRIWRSSG 713
>tr|A9S877|A9S877_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_209656 PE=4 SV=1 Length = 686
Score = 67.0 bits (162), Expect = 4e-10 Identities = 30/34 (88%), Positives = 33/34 (97%) Frame = +2
Query: 5 HELLEIPQGDRRKYHDDVSVMIISLEGRIWRSFG 106 +ELL+IPQGDRRKYHDDVSVM+ISLEGRIWRS G Sbjct: 647 NELLDIPQGDRRKYHDDVSVMVISLEGRIWRSSG 680
>tr|B8Q8C1|B8Q8C1_ORYSI SKIP interacting protein 35 (Fragment) OS=Oryza sativa subsp. indica GN=SIP35 PE=2 SV=1 Length = 550
Score = 66.2 bits (160), Expect = 8e-10 Identities = 28/33 (84%), Positives = 32/33 (96%) Frame = +2
Query: 2 FHELLEIPQGDRRKYHDDVSVMIISLEGRIWRS 100 FHEL+EIP GDRR+YHDDVSV++ISLEGRIWRS Sbjct: 516 FHELIEIPHGDRRRYHDDVSVIVISLEGRIWRS 548
>tr|A7PNM2|A7PNM2_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021315001 PE=4 SV=1 Length = 652
Score = 66.2 bits (160), Expect = 8e-10 Identities = 27/33 (81%), Positives = 33/33 (100%) Frame = +2
Query: 2 FHELLEIPQGDRRKYHDDVSVMIISLEGRIWRS 100 FHELL+IPQGDRR+YHDD+S+++ISLEGRIWRS Sbjct: 618 FHELLDIPQGDRRRYHDDLSIIVISLEGRIWRS 650
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