BP919287
Clone id YMU001_000123_D01
Library
Length 505
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000123_D01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CCTTGGCCAGCTTCAGACTTTTGGTATGCCAAGTGATAAATGGAATGTATTGCCTCAAAA
CCTGGTAGGCAGCAGTGCAGATGAGTCTTGGTTCTACTCAACGGAAGGTCCAACAGGTTG
TCTCCTGCAGTCTTCTGAACGAAGGATTAAAAATGAACGGATAATGGATTTTGGCATAGG
ATAAGCGCAATTGCCAGCATCCTTCGTGGGAAAGGGGAAGGAAAGTGTTGCTTGTACTGC
GTGTGCACAGTTAATGTGCTGATTTGCAAGTGTGATGTATTGAAGTCGGCTCTAGAGGTG
CTGGATGAGTAGAATGCTTGTGAGTGATTCTAAGGAAGTTGGGGGGGCTCTATACAAAGG
AAGGTGCTAGCTGTTGTGTTGGGCCTTTTGAAAGTATTGTAGGCTCGTAAAGCGTAAATA
CTGAGGAGAACTTCTGGTCAACTATCGAGGGTGCAAGGTAGTGGTTCTAATGGTGCCTTG
GTAGGAGCAGATAACAGCAACTGCC
■■Homology search results ■■ -
sp_hit_id Q63934
Definition sp|Q63934|PO4F2_MOUSE POU domain, class 4, transcription factor 2 OS=Mus musculus
Align length 39
Score (bit) 32.7
E-value 1.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919287|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_D01.
(505 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q63934|PO4F2_MOUSE POU domain, class 4, transcription factor ... 33 1.00
sp|Q12837|PO4F2_HUMAN POU domain, class 4, transcription factor ... 33 1.00
sp|Q91WF3|ADCY4_MOUSE Adenylate cyclase type 4 OS=Mus musculus G... 30 6.4
sp|P40494|PRK1_YEAST Actin-regulating kinase PRK1 OS=Saccharomyc... 30 6.5
sp|Q9PRB5|Y030_UREPA Uncharacterized protein UU030 OS=Ureaplasma... 30 8.4
sp|Q4KLL9|KI18B_RAT Kinesin-like protein KIF18B OS=Rattus norveg... 30 8.4

>sp|Q63934|PO4F2_MOUSE POU domain, class 4, transcription factor 2
OS=Mus musculus GN=Pou4f2 PE=2 SV=1
Length = 411

Score = 32.7 bits (73), Expect = 1.00
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -1

Query: 322 HKHSTHPAPLEPTSIHHTCKSAH*LCTRSTSNTFLPLSH 206
H H H +P +P + +HT + CT + S++ +P+SH
Sbjct: 129 HHHPPHHSPFKPDATYHTMNTIP--CTSAASSSSVPISH 165


>sp|Q12837|PO4F2_HUMAN POU domain, class 4, transcription factor 2
OS=Homo sapiens GN=POU4F2 PE=2 SV=1
Length = 410

Score = 32.7 bits (73), Expect = 1.00
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -1

Query: 322 HKHSTHPAPLEPTSIHHTCKSAH*LCTRSTSNTFLPLSH 206
H H H +P +P + +HT + CT + S++ +P+SH
Sbjct: 128 HHHPPHHSPFKPDATYHTMNTIP--CTSAASSSSVPISH 164


>sp|Q91WF3|ADCY4_MOUSE Adenylate cyclase type 4 OS=Mus musculus
GN=Adcy4 PE=2 SV=1
Length = 1077

Score = 30.0 bits (66), Expect = 6.4
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -3

Query: 185 LILCQNPLSVHF*SFVQKTAGDNLLDLPLSRTKTHLHCCLPGFEAIHSIYHLAYQ 21
L L N SV F + + L+ +PL +HCC+ GF + H++++
Sbjct: 689 LFLASNVSSVTFNASWEMPGSLPLISIPLISIPYSMHCCVLGFLSCSLFLHMSFE 743


>sp|P40494|PRK1_YEAST Actin-regulating kinase PRK1 OS=Saccharomyces
cerevisiae GN=PRK1 PE=1 SV=1
Length = 810

Score = 30.0 bits (66), Expect = 6.5
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Frame = -1

Query: 406 EPTILSKGPTQQLAP----SFV*SPPNFLRITHKHSTHPAPLEPTSIHHTCK---SAH-* 251
EP+ + PTQ+ P + PPN + +TH +T P SI+ K +AH
Sbjct: 325 EPSSTTYVPTQKFIPVQSLQSINQPPNMMPVTHVSTTPNLGTFPISINDNNKTEVTAHAG 384

Query: 250 LCTRSTSNTFLPLSHEGCWQLRLSYAKIHY----PFIFNPSFRRLQ 125
L S SN PL L +A ++Y PF + +F+ ++
Sbjct: 385 LQVGSHSNLTSPLMKTKSVPLSDEFASLYYKELHPFQKSQTFKSVE 430


>sp|Q9PRB5|Y030_UREPA Uncharacterized protein UU030 OS=Ureaplasma
parvum GN=UU030 PE=4 SV=1
Length = 747

Score = 29.6 bits (65), Expect = 8.4
Identities = 26/59 (44%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2

Query: 2 LGQLQTF--GMPSDKWNVLPQNLVGSSADESWFYSTEGPTGCLLQSSERRIKNERIMDF 172
L QLQ F G P D V P SSA SW S G L+Q+ +R IKNE I+D+
Sbjct: 581 LPQLQLFSGGYPGD---VNPN----SSAIVSWRGSKS--YGSLIQAFDREIKNESILDY 630


>sp|Q4KLL9|KI18B_RAT Kinesin-like protein KIF18B OS=Rattus
norvegicus GN=Kif18b PE=2 SV=1
Length = 826

Score = 29.6 bits (65), Expect = 8.4
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = -2

Query: 180 PMPKSIIRSFLILRSEDCRRQPVGPSVE*NQDSSALLPTRF*GNTFHLSLGIPKV*SWP 4
P P S + +++S R P+GPS N + LPTR TF++S P S+P
Sbjct: 677 PSPSSRVCPATVIKS----RVPLGPSALQNCSTPLTLPTRDLNTTFNVSEESPSKPSFP 731


tr_hit_id B0EVF0
Definition tr|B0EVF0|B0EVF0_ENTDI Rap GTPase-activating protein, putative OS=Entamoeba dispar SAW760
Align length 76
Score (bit) 35.8
E-value 1.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919287|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_D01.
(505 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B0EVF0|B0EVF0_ENTDI Rap GTPase-activating protein, putative O... 36 1.2
tr|Q6XZH1|Q6XZH1_DANRE POU domain transcription factor Brn3b-l O... 35 2.7
tr|Q6XZH0|Q6XZH0_DANRE POU domain transcription factor Brn3b-s O... 35 2.7
tr|Q0CI95|Q0CI95_ASPTN Putative uncharacterized protein OS=Asper... 34 4.5
tr|A6S364|A6S364_BOTFB Predicted protein OS=Botryotinia fuckelia... 33 5.8
tr|B0WRN9|B0WRN9_CULQU Putative uncharacterized protein OS=Culex... 33 7.8

>tr|B0EVF0|B0EVF0_ENTDI Rap GTPase-activating protein, putative
OS=Entamoeba dispar SAW760 GN=EDI_185590 PE=4 SV=1
Length = 858

Score = 35.8 bits (81), Expect = 1.2
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Frame = -3

Query: 407 RAYNTFKRP---------NTTASTFLCIEPPQLP*NHSQAFYSSSTSRADFNTSHLQIST 255
R NTF P NTT S + I LP H + FY+S T + D +
Sbjct: 481 RKQNTFDTPKKLIETWTNNTTQSKIILINQNTLPDYHIENFYTSCTHKYD-ELMNKNYHD 539

Query: 254 LTVHTQYKQHFPSPFP 207
+T+ Y Q+F PFP
Sbjct: 540 VTLPITYYQNFIKPFP 555


>tr|Q6XZH1|Q6XZH1_DANRE POU domain transcription factor Brn3b-l
OS=Danio rerio GN=pou4f2 PE=2 SV=1
Length = 384

Score = 34.7 bits (78), Expect = 2.7
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = -1

Query: 325 THKHSTHPAPLEPTSIHHTCKSAH*LCTRSTSNTFLPLSH 206
+H H H +P +P + +HT + CT S+S++ +P+SH
Sbjct: 103 SHHHPPHHSPFKPDATYHTMNTLP--CTSSSSSSSVPISH 140


>tr|Q6XZH0|Q6XZH0_DANRE POU domain transcription factor Brn3b-s
OS=Danio rerio GN=pou4f2 PE=2 SV=1
Length = 319

Score = 34.7 bits (78), Expect = 2.7
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = -1

Query: 325 THKHSTHPAPLEPTSIHHTCKSAH*LCTRSTSNTFLPLSH 206
+H H H +P +P + +HT + CT S+S++ +P+SH
Sbjct: 38 SHHHPPHHSPFKPDATYHTMNTLP--CTSSSSSSSVPISH 75


>tr|Q0CI95|Q0CI95_ASPTN Putative uncharacterized protein
OS=Aspergillus terreus (strain NIH 2624) GN=ATEG_06589
PE=4 SV=1
Length = 861

Score = 33.9 bits (76), Expect = 4.5
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = -3

Query: 386 RPNTTASTFLCIEPPQLP*N--HSQAFYSSSTSRADFNTSHLQISTLTVHTQYKQHFPSP 213
+PNTT T P LP HSQ Y +T + T+H +T T +QY PS
Sbjct: 116 QPNTTIPT-ASYTPHALPNGLLHSQHSYGQTTQDQPYYTTHTSYTTATTPSQY----PSS 170

Query: 212 FPRRMLA 192
P+ M+A
Sbjct: 171 GPQEMMA 177


>tr|A6S364|A6S364_BOTFB Predicted protein OS=Botryotinia fuckeliana
(strain B05.10) GN=BC1G_06915 PE=4 SV=1
Length = 372

Score = 33.5 bits (75), Expect = 5.8
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Frame = -3

Query: 407 RAYNTFKRPNTTASTFLCIEP---PQLP*NHSQAFYSSSTSRAD-----FNTSHLQISTL 252
R N+ P TT+ST +CI P P P +Q YSS+ + + S L T
Sbjct: 10 RFTNSSFLPGTTSSTTICIPPALSPSYPTQLTQPLYSSALTPPTQHDRIHSRSFLPNQTT 69

Query: 251 TVHTQYKQHFPSPFPRRMLAIALILC 174
+ + K HF +P + I+C
Sbjct: 70 HLTSTLKDHFDTPTKVTFYTLFFIIC 95


>tr|B0WRN9|B0WRN9_CULQU Putative uncharacterized protein OS=Culex
quinquefasciatus GN=CpipJ_CPIJ010014 PE=4 SV=1
Length = 525

Score = 33.1 bits (74), Expect = 7.8
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Frame = -1

Query: 457 LAPSIVDQKFSSVFTLYEPTILSKGPTQQLAPSFV*SPPNFLRITHKHSTHPAPLEPTSI 278
LAPS K + T P+I + G L P + P+ + H H H +PL P +I
Sbjct: 379 LAPS---SKSAFGATSVAPSIHNNGTAPSLLPGSLSPVPSTSYLPHPH--HHSPLSPPAI 433

Query: 277 HHTCKSAH*LCTRSTSNTFL---PLSHEG 200
HH S+ S+SN L P+S G
Sbjct: 434 HHASSSS------SSSNYLLSPPPMSGGG 456