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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919289
Clone id YMU001_000123_D03
Library
Length 513
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000123_D03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CCCTCGGGAGTGTGCTCTTTGGGCTTTGATGCGTCTGAATAGAAAATGATATCCTTCCCA
CTTAAGGAATCCTTGAAGACTCCGACATCCAATCGTAAAAATGAGCCATTGCAATTCCAT
ACCTCAAGCTTTAGGTTGGTCCTATAGGTCGTGCACCGTCATTCGGTGCGATTGTCAAGT
ACTATCACTATGCCTCCTCTTTAGAAAGTGAGGTTTCTCTTCTCTCTAGCAGCCAAGATC
TCAAGCTTGCATTCTTTTATGTGTGCTAGTTGAGACAATGTAAGATCATCTCCCAAGAAA
ATCCTTGTTTGCTTTAGCGTAGGCCTCTTTTTAAGGAAGTCCTTCCTCTCTTCTATGGTA
GTGAAACGCATGATTAGAGCACGTTCCTTGGAGGTTCCCACATCACCTACTCCTTTTTTT
CCCACTCTCCATACTCCGGTGCGTTTTGGCTCCATGATTCCCATATGTACATAGAGACTT
TTCACTTCCTCGTCCACATTGTTGATGTCCTTC
■■Homology search results ■■ -
sp_hit_id P14616
Definition sp|P14616|INSRR_HUMAN Insulin receptor-related protein OS=Homo sapiens
Align length 50
Score (bit) 31.2
E-value 2.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919289|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_D03.
         (513 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P14616|INSRR_HUMAN Insulin receptor-related protein OS=Homo s...    31   2.9  
sp|Q86YZ3|HORN_HUMAN Hornerin OS=Homo sapiens GN=HRNR PE=1 SV=2        31   3.9  
sp|Q1CTU5|PYRC_HELPH Dihydroorotase OS=Helicobacter pylori (stra...    30   6.5  
sp|Q9WTL4|INSRR_MOUSE Insulin receptor-related protein OS=Mus mu...    30   6.5  
sp|Q753Q4|RPB2_ASHGO DNA-directed RNA polymerase II subunit RPB2...    30   8.5  
sp|A2SSW2|IF2B_METLZ Translation initiation factor 2 subunit bet...    30   8.5  

>sp|P14616|INSRR_HUMAN Insulin receptor-related protein OS=Homo
           sapiens GN=INSRR PE=2 SV=2
          Length = 1297

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = -2

Query: 377 LIMRFTTIEERKDFLKKRPTLKQTRIFLGDDLTLSQLAHIKECKLEILAA 228
           L+ R   +E  +D       ++ TR+FLG  L + ++ H+++  L  L A
Sbjct: 84  LLFRVYGLESLRDLFPNLAVIRGTRLFLGYALVIFEMPHLRDVALPALGA 133


>sp|Q86YZ3|HORN_HUMAN Hornerin OS=Homo sapiens GN=HRNR PE=1 SV=2
          Length = 2850

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -1

Query: 510  GHQQCGRGSEKSLCTYGNHGAKTHRSMESGKKRSR*CGNLQGTCSNHAFHYHRREEG 340
            GH Q G GS +S  +YG HG+ + RS  SG+  S       G   +  F +H    G
Sbjct: 1127 GHGQRGSGSRQSP-SYGRHGSGSGRSSSSGQHGS-------GLGESSGFGHHESSSG 1175



 Score = 30.8 bits (68), Expect = 3.9
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -1

Query: 510  GHQQCGRGSEKSLCTYGNHGAKTHRSMESGKKRSR*CGNLQGTCSNHAFHYHRREEG 340
            GH Q G GS +S  +YG HG+ + RS  SG+  S       G   +  F +H    G
Sbjct: 1597 GHGQRGSGSRQSP-SYGRHGSGSGRSSSSGQHGS-------GLGESSGFGHHESSSG 1645



 Score = 30.8 bits (68), Expect = 3.9
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -1

Query: 510  GHQQCGRGSEKSLCTYGNHGAKTHRSMESGKKRSR*CGNLQGTCSNHAFHYHRREEG 340
            GH Q G GS +S  +YG HG+ + RS  SG+  S       G   +  F +H    G
Sbjct: 2537 GHGQRGSGSRQSP-SYGRHGSGSGRSSSSGQHGS-------GLGESSGFGHHESSSG 2585


>sp|Q1CTU5|PYRC_HELPH Dihydroorotase OS=Helicobacter pylori (strain
           HPAG1) GN=pyrC PE=3 SV=1
          Length = 339

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
 Frame = -2

Query: 383 RALIMRFTTIEERKDFLKKRPTLKQTR-IFLGDDLTLSQLAHIKECKLEILAAREKRNLT 207
           + LI   TT+E  ++ LK     K    ++  DDLTL +L    E  +  L    K   T
Sbjct: 43  KPLIDTPTTLEYEEEILKNSSNFKPLMSLYFNDDLTLEELQRAHEKGVRFLKLYPKGMTT 102

Query: 206 F*RGGIVIVLDNRT 165
             + G   +LD +T
Sbjct: 103 NAQNGTSDLLDEKT 116


>sp|Q9WTL4|INSRR_MOUSE Insulin receptor-related protein OS=Mus
           musculus GN=Insrr PE=2 SV=1
          Length = 1300

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = -2

Query: 377 LIMRFTTIEERKDFLKKRPTLKQTRIFLGDDLTLSQLAHIKECKLEILAA 228
           L+ R   +E  +D       ++ TR+FLG  L + ++ H+++  L  L A
Sbjct: 84  LLFRVYGLESLRDLFPNLTVIRGTRLFLGYALIIFEMPHLRDVGLPSLGA 133


>sp|Q753Q4|RPB2_ASHGO DNA-directed RNA polymerase II subunit RPB2
           OS=Ashbya gossypii GN=RPB2 PE=3 SV=1
          Length = 1222

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = -2

Query: 353 EERKDFLKKRPTLKQTRIFLGDDLTLSQLAHIKECKLEI 237
           EE K F+ + P + +++  L DDL+ S L  +KEC  ++
Sbjct: 156 EEGKIFIGRVPIMLRSKYCLLDDLSESDLYRLKECPFDM 194


>sp|A2SSW2|IF2B_METLZ Translation initiation factor 2 subunit beta
           OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM
           4855 / Z) GN=eIF2B PE=3 SV=1
          Length = 204

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -2

Query: 491 EEVKSLYVHMGIMEPKRTGVWRVGKKGVGDVGTSKERALIMRFTTIEERKDFLKK 327
           EE K L VH+  +  K  GV R+GK  +   GT   + + +R T I  +  F +K
Sbjct: 148 EEGKELEVHIESISKKGDGVARIGKYILYVAGTKAGQNVKVRITRISGQVAFTQK 202
tr_hit_id B4RTV5
Definition tr|B4RTV5|B4RTV5_ALTMD BatD protein OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype)
Align length 69
Score (bit) 35.8
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919289|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_D03.
         (513 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4RTV5|B4RTV5_ALTMD BatD protein OS=Alteromonas macleodii (st...    36   1.3  
tr|A6LYH1|A6LYH1_CLOB8 Putative glucan-binding protein D; BglB-l...    35   2.8  
tr|A6VSF9|A6VSF9_MARMS Amidase OS=Marinomonas sp. (strain MWYL1)...    34   4.8  
tr|A8NN66|A8NN66_COPC7 Predicted protein OS=Coprinopsis cinerea ...    33   8.1  

>tr|B4RTV5|B4RTV5_ALTMD BatD protein OS=Alteromonas macleodii
           (strain DSM 17117 / Deep ecotype) GN=MADE_02707 PE=4
           SV=1
          Length = 586

 Score = 35.8 bits (81), Expect = 1.3
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = -2

Query: 416 KGVGDVGTSKERALIMRFTTIEERKDFLKKRPTLKQ-TRIFLGDDLTLSQLAHIKECKLE 240
           KGV  +G + E+A   R  ++ +  D     P L+Q  +   GD+  LSQ A I     E
Sbjct: 471 KGVSVLGHTDEKAQFQRVMSLIKANDTRALTPALQQWLKTLTGDNAQLSQFASINSLMSE 530

Query: 239 ILAAREKRN 213
           + AAR  +N
Sbjct: 531 LYAARFAKN 539


>tr|A6LYH1|A6LYH1_CLOB8 Putative glucan-binding protein D; BglB-like
           protein OS=Clostridium beijerinckii (strain ATCC 51743 /
           NCIMB 8052) GN=Cbei_3272 PE=3 SV=1
          Length = 466

 Score = 34.7 bits (78), Expect = 2.8
 Identities = 19/76 (25%), Positives = 36/76 (47%)
 Frame = -2

Query: 512 KDINNVDEEVKSLYVHMGIMEPKRTGVWRVGKKGVGDVGTSKERALIMRFTTIEERKDFL 333
           K +N   +++++ +    I+ P+    W  G  G GD  +  E+AL+         KD++
Sbjct: 236 KAVNFASKDMQAYFNGAYILAPQAPTFWMDGFTGFGDGSSKYEKALMSLI------KDYV 289

Query: 332 KKRPTLKQTRIFLGDD 285
            K   +   RI++G D
Sbjct: 290 SKNSNIDTNRIYIGGD 305


>tr|A6VSF9|A6VSF9_MARMS Amidase OS=Marinomonas sp. (strain MWYL1)
           GN=Mmwyl1_0451 PE=4 SV=1
          Length = 411

 Score = 33.9 bits (76), Expect = 4.8
 Identities = 30/120 (25%), Positives = 55/120 (45%)
 Frame = -2

Query: 362 TTIEERKDFLKKRPTLKQTRIFLGDDLTLSQLAHIKECKLEILAAREKRNLTF*RGGIVI 183
           TT+E+    L K    K+    L  +  + Q+AH+KE + ++   RE+ +         I
Sbjct: 187 TTLEKTARVLLKSKFSKEFGNVLIANNLIDQVAHVKELRTQLKTWREQGHFA---KESSI 243

Query: 182 VLDNRTE*RCTTYRTNLKLEVWNCNGSFLRLDVGVFKDSLSGKDIIFYSDASKPKEHTPE 3
           V+D +      T+RT    E+W+ +G ++        +SL+  D +  S+A K     P+
Sbjct: 244 VIDTKAWKTSETFRTLQGAEIWHEHGKWI--------NSLNSSDSL--SEAEKQSVFAPD 293


>tr|A8NN66|A8NN66_COPC7 Predicted protein OS=Coprinopsis cinerea
           (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_06460 PE=4
           SV=1
          Length = 211

 Score = 33.1 bits (74), Expect = 8.1
 Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 4/104 (3%)
 Frame = -2

Query: 512 KDINNVDEEVKSLYVHMGIMEPKRTGVWRVGKKGVGDVGTSKERALIMRFTTIEERKDFL 333
           +D ++ D E +  Y  + + EP   G+W  GKK       +     +M     +++KD  
Sbjct: 34  RDYSDFDFEARDFYDDLDVREPVSKGLWSFGKKAFTAFSGAATLGSLMAPLFSKKKKDEK 93

Query: 332 KKRPTLK----QTRIFLGDDLTLSQLAHIKECKLEILAAREKRN 213
           KKR  +       R F  D+L     A + +   E L  R+  +
Sbjct: 94  KKRSFVDDYEVDAREFFEDELE----ARMFDGNFEYLVVRDSED 133