BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919291|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_D05.
         (482 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7N5W0|PYRC_PHOLL Dihydroorotase OS=Photorhabdus luminescens ...    30   4.4  
sp|Q75VX8|FA59B_HUMAN Protein FAM59B OS=Homo sapiens GN=FAM59B P...    30   7.5  
sp|A1KSU5|PYRC_NEIMF Dihydroorotase OS=Neisseria meningitidis se...    29   9.8  
sp|Q8FPE0|MIAA_COREF tRNA delta(2)-isopentenylpyrophosphate tran...    29   9.8  

>sp|Q7N5W0|PYRC_PHOLL Dihydroorotase OS=Photorhabdus luminescens
           subsp. laumondii GN=pyrC PE=3 SV=1
          Length = 350

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
 Frame = -3

Query: 303 FVERMPSKKKHTCPELKCVFQH----EVIFAALESQVNHPS*I*PLHLMKRKSNLLISCT 136
           F+E++    ++  P LK VF+H    E     LE   N  + + P HLM  ++++L+   
Sbjct: 157 FIEQVMEPLRNQFPALKVVFEHITTKEAAQYVLEGNNNLAATLTPQHLMFNRNHMLVGGI 216

Query: 135 KEIMY 121
           +  +Y
Sbjct: 217 RPHLY 221


>sp|Q75VX8|FA59B_HUMAN Protein FAM59B OS=Homo sapiens GN=FAM59B PE=2
           SV=2
          Length = 987

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 10/59 (16%)
 Frame = +2

Query: 317 GSLYPSGPYNLLSGHVSSTTNPLLTS--VHLP--------HSFGDPSHCQHTA*SISRW 463
           G  YPSGP   LS    +T+ P+ TS   + P        +S   PS C  ++ S S W
Sbjct: 748 GPAYPSGPSAALSSGPRTTSGPVATSGPAYSPGPASPGQAYSAAPPSSCAPSSSSSSEW 806


>sp|A1KSU5|PYRC_NEIMF Dihydroorotase OS=Neisseria meningitidis
           serogroup C / serotype 2a (strain ATCC 700532 / FAM18)
           GN=pyrC PE=3 SV=1
          Length = 344

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
 Frame = -3

Query: 303 FVERMPSKKKHTCPELKCVFQH----EVIFAALESQVNHPS*I*PLHLMKRKSNLLI 145
           F+ER+        P LK VF+H    E     LE+  N  + + P HL+  +++LL+
Sbjct: 152 FIERVMKPVLAQVPNLKVVFEHITTAEAARLVLEAGDNVAASVTPQHLLLNRNDLLV 208


>sp|Q8FPE0|MIAA_COREF tRNA delta(2)-isopentenylpyrophosphate
           transferase OS=Corynebacterium efficiens GN=miaA PE=3
           SV=1
          Length = 301

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = -1

Query: 395 LKSVEGLLLRIHGLIVDCTDHSDIGFLCYLDLLSG 291
           L+ VEGL+ R HGLI + T    IG+   LD L+G
Sbjct: 217 LEEVEGLV-RDHGLIAESTAGRAIGYAQVLDALAG 250

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919291|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_D05.
         (482 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SSK3|A9SSK3_PHYPA Predicted protein OS=Physcomitrella paten...    39   0.17 
tr|B3MB85|B3MB85_DROAN GF10996 OS=Drosophila ananassae GN=GF1099...    34   3.1  
tr|B8MJ33|B8MJ33_9EURO Putative uncharacterized protein OS=Talar...    33   7.0  
tr|B2JIF0|B2JIF0_BURP8 Putative uncharacterized protein OS=Burkh...    33   9.2  

>tr|A9SSK3|A9SSK3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_234038 PE=4 SV=1
          Length = 895

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = -3

Query: 405 GRWTEVSRGFVVEDTWPDS 349
           G W EVSRGFVVEDTWP S
Sbjct: 851 GAWLEVSRGFVVEDTWPVS 869


>tr|B3MB85|B3MB85_DROAN GF10996 OS=Drosophila ananassae GN=GF10996
           PE=4 SV=1
          Length = 709

 Score = 34.3 bits (77), Expect = 3.1
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = +2

Query: 284 LGIRSTNQGSKGSLYPSGPYNLLSGHVSSTTNPLLTSVHLPHSFGDPSHCQHTA 445
           LG  S   GS  + + SG  N+ S H SS++NP  T+      FG    CQ  A
Sbjct: 370 LGTSSQANGSMSAAFTSGASNISSAHSSSSSNPNSTTPISDEVFGIMDICQSCA 423


>tr|B8MJ33|B8MJ33_9EURO Putative uncharacterized protein
           OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_051310 PE=4
           SV=1
          Length = 316

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +2

Query: 353 SGHVSSTTNPLLTSVHLPHSFGDPS 427
           SGHV + + PLL++ H PHSF D S
Sbjct: 207 SGHVLTASMPLLSTHHYPHSFNDGS 231


>tr|B2JIF0|B2JIF0_BURP8 Putative uncharacterized protein
           OS=Burkholderia phymatum (strain DSM 17167 / STM815)
           GN=Bphy_1362 PE=4 SV=1
          Length = 338

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -3

Query: 405 GRWTEVSRGFVVEDTWPD 352
           G+W+E SRGF+V D WP+
Sbjct: 308 GQWSERSRGFIVPDDWPE 325