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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919298
Clone id YMU001_000123_D12
Library
Length 496
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000123_D12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CATTAATTTCAAACAAAGGGGTAGCATCTTCATGGCTAAAAACTAAGAAGTCTACCACTC
TTTTGTTACACCTTCCTATAAAGAAAACCATGATTGCAACCACTTTAGCACACACACTCA
CACATGCGCGCACGCGCACACGGGGGTGACCTTAACAAAGAGTGCAAACAAGGACTAGCA
TGCACAAAACACATACAAAACACACATCCAAACACAGCTATACTATATTTCTCCGTTCAC
TTACTCTCATGGGAAGATAGCGAGCAGGAGACACGTTCGAGATTTATGATGTTTCTCTCT
AAGAGTCTTCCCATATAGACCAAGAACTCCTCCTCATCATAGCCATGGACAGGGCTTAGC
TCTATCTTCCATGTGACCAAAGCATGCCCATTGTTGCAAGGATCCGACAACGAGAAAGAC
GCGGTGTAGTTCTTAAAACCCAAATTACTGTCCAAAATGGAGTAAGAGAACTCTCTTAAA
CGAGGGTCCCATTCCA
■■Homology search results ■■ -
sp_hit_id Q5LJP9
Definition sp|Q5LJP9|ASND1_DROME Asparagine synthetase domain-containing protein CG17486 OS=Drosophila melanogaster
Align length 129
Score (bit) 30.0
E-value 6.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919298|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_D12.
         (496 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5LJP9|ASND1_DROME Asparagine synthetase domain-containing pr...    30   6.0  
sp|Q9ULG1|INO80_HUMAN Putative DNA helicase INO80 complex homolo...    30   6.1  

>sp|Q5LJP9|ASND1_DROME Asparagine synthetase domain-containing
           protein CG17486 OS=Drosophila melanogaster GN=CG17486
           PE=1 SV=2
          Length = 564

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 5/129 (3%)
 Frame = -3

Query: 491 WDPRLREFSYSIL---DSNLGFKNYTASFSLSDPCNNGHALVTWKIELSPVHGYDEEEFL 321
           W P L  +S  +L   D  +G+K    S    D          W +  +P   Y+  EF 
Sbjct: 190 WQP-LNNYSTQLLRNLDLAIGWKTAVESPMSPD----------WMLNCNPAFSYNFYEFQ 238

Query: 320 VYMGRL-LERNIINLERVSCSLSSHESK*TEKYSIAVFGCV-FCMCFVHASPCLHSLLRS 147
                + L +N+I+   +  +LS   +  ++     V     FC        C+  L  S
Sbjct: 239 YIKNNVNLYKNLIDQSEIKYTLSILHTLLSDSIKNRVRNMAPFCRL------CMQKLNIS 292

Query: 146 PPCARARMC 120
           PPC  A++C
Sbjct: 293 PPCRHAKLC 301


>sp|Q9ULG1|INO80_HUMAN Putative DNA helicase INO80 complex homolog 1
           OS=Homo sapiens GN=INO80 PE=1 SV=2
          Length = 1556

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 203 HIQTQLYYISPFTYSHGKIASRRHVRD 283
           HI  + Y+IS F Y HG+I    H RD
Sbjct: 832 HISLKPYHISKFIYRHGQIRVFNHSRD 858
tr_hit_id A5BHR2
Definition tr|A5BHR2|A5BHR2_VITVI Putative uncharacterized protein (Chromosome chr4 scaffold_6, whole genome shotgun sequence) OS=Vitis vinifera
Align length 64
Score (bit) 48.9
E-value 0.0001
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919298|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_D12.
         (496 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5BHR2|A5BHR2_VITVI Putative uncharacterized protein (Chromos...    49   1e-04
tr|A7P554|A7P554_VITVI Chromosome chr4 scaffold_6, whole genome ...    47   5e-04
tr|A5BHR3|A5BHR3_VITVI Putative uncharacterized protein OS=Vitis...    47   5e-04
tr|A9PJ81|A9PJ81_POPJC Putative uncharacterized protein OS=Popul...    46   8e-04
tr|Q5JM62|Q5JM62_ORYSJ Putative uncharacterized protein P0042A10...    44   0.003
tr|A7PEI3|A7PEI3_VITVI Chromosome chr11 scaffold_13, whole genom...    43   0.009
tr|A2WUM6|A2WUM6_ORYSI Putative uncharacterized protein OS=Oryza...    41   0.035
tr|B6UBY7|B6UBY7_MAIZE Lachrymatory-factor synthase OS=Zea mays ...    39   0.13 
tr|A2SEB2|A2SEB2_METPP Putative uncharacterized protein OS=Methy...    38   0.30 
tr|Q8WYX9|Q8WYX9_HUMAN Putative uncharacterized protein pp10122 ...    35   1.5  
tr|Q23LP9|Q23LP9_TETTH Myb-like DNA-binding domain, SHAQKYF clas...    35   2.5  
tr|A0RGH8|A0RGH8_BACAH Putative uncharacterized protein OS=Bacil...    34   3.3  
tr|B3ZIE1|B3ZIE1_BACCE Putative uncharacterized protein OS=Bacil...    34   3.3  
tr|O82320|O82320_ARATH Putative uncharacterized protein At2g2577...    34   3.3  
tr|Q8H937|Q8H937_ALLPO Lachrymatory factor synthase OS=Allium am...    34   4.3  
tr|Q0Q041|Q0Q041_ANTMY Attacin-like protein OS=Antheraea mylitta...    34   4.4  
tr|B0ALQ4|B0ALQ4_BACAN Putative uncharacterized protein OS=Bacil...    33   5.6  
tr|B6TSX0|B6TSX0_MAIZE Putative uncharacterized protein OS=Zea m...    33   5.6  
tr|Q81MV7|Q81MV7_BACAN Putative uncharacterized protein OS=Bacil...    33   7.3  
tr|Q81AY6|Q81AY6_BACCR XoxI OS=Bacillus cereus (strain ATCC 1457...    33   7.3  
tr|Q6HG14|Q6HG14_BACHK Putative uncharacterized protein OS=Bacil...    33   7.3  
tr|B7JG92|B7JG92_BACCE Putative uncharacterized protein OS=Bacil...    33   7.3  
tr|B7H6E4|B7H6E4_BACCE Putative uncharacterized protein OS=Bacil...    33   7.3  
tr|B3Z4S8|B3Z4S8_BACCE Putative uncharacterized protein OS=Bacil...    33   7.3  
tr|B3YXQ4|B3YXQ4_BACCE Putative uncharacterized protein OS=Bacil...    33   7.3  
tr|B3IZI2|B3IZI2_BACAN Putative uncharacterized protein OS=Bacil...    33   7.3  
tr|B1UL17|B1UL17_BACAN Putative uncharacterized protein OS=Bacil...    33   7.3  
tr|B1GCR2|B1GCR2_BACAN Putative uncharacterized protein OS=Bacil...    33   7.3  
tr|B1EUZ1|B1EUZ1_BACAN Putative uncharacterized protein OS=Bacil...    33   7.3  
tr|B0QDB3|B0QDB3_BACAN Putative uncharacterized protein OS=Bacil...    33   7.3  

>tr|A5BHR2|A5BHR2_VITVI Putative uncharacterized protein (Chromosome
           chr4 scaffold_6, whole genome shotgun sequence) OS=Vitis
           vinifera GN=GSVIVT00032406001 PE=4 SV=1
          Length = 163

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 23/64 (35%), Positives = 34/64 (53%)
 Frame = -3

Query: 488 DPRLREFSYSILDSNLGFKNYTASFSLSDPCNNGHALVTWKIELSPVHGYDEEEFLVYMG 309
           DP    FSY +LD+N+GF +Y  +F +  P N G  L+ W     PV G+  E+   Y+ 
Sbjct: 87  DPINHCFSYEVLDNNMGFNSYVTTFKVI-PINGGGCLIQWSFVCDPVQGWRYEDLASYID 145

Query: 308 RLLE 297
             L+
Sbjct: 146 SSLQ 149


>tr|A7P554|A7P554_VITVI Chromosome chr4 scaffold_6, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00032405001
           PE=4 SV=1
          Length = 161

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
 Frame = -3

Query: 488 DPRLREFSYSILDSNLGFKNYTASFSLSDPCNNGHALVTWKIELSPVHGYDEEEF----- 324
           DP  R FSY +LD+N+GF +Y A+  +  P + G   + W     P+ G+  ++      
Sbjct: 80  DPIQRCFSYEVLDNNIGFNSYVATIKVL-PVDGGGCRIEWSFASGPIEGWRSDDLGSFVD 138

Query: 323 --LVYMGRLLERNIINLERVSC 264
             L +M + +E  I N +  SC
Sbjct: 139 SCLQFMAKKMEAAIKNEDGSSC 160


>tr|A5BHR3|A5BHR3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_034796 PE=4 SV=1
          Length = 172

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
 Frame = -3

Query: 488 DPRLREFSYSILDSNLGFKNYTASFSLSDPCNNGHALVTWKIELSPVHGYDEEEF----- 324
           DP  R FSY +LD+N+GF +Y A+  +  P + G   + W     P+ G+  ++      
Sbjct: 91  DPIQRCFSYEVLDNNIGFNSYVATIKVL-PVDGGGCRIEWSFASGPIEGWRSDDLGSFVD 149

Query: 323 --LVYMGRLLERNIINLERVSC 264
             L +M + +E  I N +  SC
Sbjct: 150 SCLQFMAKKMEAAIKNEDGSSC 171


>tr|A9PJ81|A9PJ81_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 171

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 13/82 (15%)
 Frame = -3

Query: 488 DPRLREFSYSILDSNLGFKNYTASFSLSDPCNNGHA------LVTWKIELSPVHGYDEEE 327
           +P  R  SY IL++N GFK+Y A+  +S P N+G         + W     P+ G+  E+
Sbjct: 90  NPSERCLSYEILENNAGFKSYVATMKVS-PINDGDGDGHHGCTIEWSFIADPIEGWPLED 148

Query: 326 F-------LVYMGRLLERNIIN 282
           F       L +MG+ +ER++++
Sbjct: 149 FNSYINSSLQFMGKKMERDVLS 170


>tr|Q5JM62|Q5JM62_ORYSJ Putative uncharacterized protein P0042A10.2
           (Putative uncharacterized protein) (Putative
           uncharacterized protein P0022F10.27) OS=Oryza sativa
           subsp. japonica GN=P0042A10.2 PE=4 SV=1
          Length = 222

 Score = 44.3 bits (103), Expect = 0.003
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = -3

Query: 494 EWDPRLREFSYSILDSNLGFKNYTASFSLS-DPCNNGHALVTWKIELSPVHGYDEEEFLV 318
           E+DP  R +SY ++++N GF  Y A+  +  DP       V W  E  PV G+  E F+ 
Sbjct: 145 EFDPVARRYSYEVVETNKGFGRYAATLRVEPDPAG---CAVAWSFEADPVRGWSLEGFVG 201

Query: 317 YMGRL 303
           ++  L
Sbjct: 202 FLDEL 206


>tr|A7PEI3|A7PEI3_VITVI Chromosome chr11 scaffold_13, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00016676001
           PE=4 SV=1
          Length = 209

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
 Frame = -3

Query: 488 DPRLREFSYSILDSNLGFKNYTASFSLSDPCNNGHALVTWKIELSPVHGYDEEEFLVYMG 309
           DP    FSYSI+D N+GF +Y ++  +  P   G   + W+ E+ PV G+   +   ++G
Sbjct: 93  DPDELTFSYSIIDGNVGFNSYVSTVKVL-PTEEG-CSIEWRYEVEPVEGWTLGDLDSFIG 150

Query: 308 RLLERNIINLERVSCSLSSHESK*TEKYSIA------VFGCVFCMCFVHASPCLHSLLRS 147
             L+   +  +R+  +L +  ++   K+S++      +F C +    +H       L+  
Sbjct: 151 SGLQ---VMAKRMEAALKAGMNR-ISKFSLSFSPTRDIFSCFYSYTSLH-------LILF 199

Query: 146 PPCARARMCECVC*SG 99
           P       C C C SG
Sbjct: 200 P-------CYCRCSSG 208


>tr|A2WUM6|A2WUM6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_03580 PE=4 SV=1
          Length = 164

 Score = 40.8 bits (94), Expect = 0.035
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = -3

Query: 494 EWDPRLREFSYSILDSNLGFKNYTASFSLS-DPCNNGHALVTWKIELSPVHGYDEEEFLV 318
           E+DP  R +SY ++++N GF  Y A+  +  DP       V W  E   V G+  E F+ 
Sbjct: 87  EFDPVARRYSYEVVETNKGFGRYAATLRVEPDPAG---CAVAWSFEADQVRGWTLEGFVG 143

Query: 317 YMGRL 303
           ++  L
Sbjct: 144 FLDEL 148


>tr|B6UBY7|B6UBY7_MAIZE Lachrymatory-factor synthase OS=Zea mays
           PE=2 SV=1
          Length = 177

 Score = 38.9 bits (89), Expect = 0.13
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = -3

Query: 494 EWDPRLREFSYSILDSNLGFKNYTASFSLS-DPCNNGHALVTWKIELSPVHGYDEEEFLV 318
           E D   R +SY +L+SN GF  Y A+  +  DP       V W  E  PV G+  + FL 
Sbjct: 100 EMDHAGRWYSYELLESNKGFGRYRATVRVEHDPAG---CAVRWSFEADPVKGWTLDGFLG 156

Query: 317 YMGRL 303
           ++ +L
Sbjct: 157 FLEKL 161


>tr|A2SEB2|A2SEB2_METPP Putative uncharacterized protein
           OS=Methylibium petroleiphilum (strain PM1) GN=Mpe_A0939
           PE=4 SV=1
          Length = 166

 Score = 37.7 bits (86), Expect = 0.30
 Identities = 20/66 (30%), Positives = 34/66 (51%)
 Frame = -3

Query: 476 REFSYSILDSNLGFKNYTASFSLSDPCNNGHALVTWKIELSPVHGYDEEEFLVYMGRLLE 297
           R +SY+I++S L   NY A+ +L+ P   G   +TW+      HG  +E+    +G L +
Sbjct: 96  RSYSYAIVESALPVANYKATITLT-PAEEGRTRMTWRSTFD-AHGVSDEQATTIIGALQD 153

Query: 296 RNIINL 279
             +  L
Sbjct: 154 AGMAKL 159


>tr|Q8WYX9|Q8WYX9_HUMAN Putative uncharacterized protein pp10122
           OS=Homo sapiens GN=pp10122 PE=2 SV=1
          Length = 400

 Score = 35.4 bits (80), Expect = 1.5
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -3

Query: 206 CVFCMCFVHASPCLHSLLRSPPCARARMCECVC*SG 99
           C FCMC V+   C+H  + +  CA   MC CVC  G
Sbjct: 24  CAFCMC-VYVCVCVHVHVCASVCAFVCMCVCVCVCG 58