BP919304
Clone id YMU001_000123_E07
Library
Length 500
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000123_E07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AATTAACATAATCAATGATGTAATGTTGTACAAGAGAGTCATTTTTTCTCTCCAGGCCAG
CATACCTCCCTAGTGGGCATCTCCTCTCATTTCCAAAAAATAATGTGATTTCACCTCTGG
CGGCCACTAAACTTGCCTATCAAGACATCACCTGTACAAGGAGCTTCAAGTGCTTTTGCG
CCGACCTGCTGATTGTTTAACTGCGTGCTTCCTGCAGCCAAACTTAACTCCTTATCTCCC
CCTCATTGTTTTAAGACCCTAATCTAGCCTTGGCTATGGTTCTGTTACAGAAAATACAAC
AAGTGTGGCAGTGTCACCAAGGGCACAAGGAAGGCATCCGTGGATAGGAGAGATGCTGTT
ACATGCTTGATCCTCCTTGATACACCAAAAGATATTGGCTTACTTGGAACAGATATTTAC
ATCTCGTTTCCTCGATTGAGTAAACCGGCAACAAAGGATTGGTTTACAAGTTCCACAAAA
GCACTTCAGGATAGAGAGCC
■■Homology search results ■■ -
sp_hit_id Q9S9U6
Definition sp|Q9S9U6|1A111_ARATH 1-aminocyclopropane-1-carboxylate synthase 11 OS=Arabidopsis thaliana
Align length 43
Score (bit) 30.8
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919304|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_E07.
(500 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9S9U6|1A111_ARATH 1-aminocyclopropane-1-carboxylate synthase... 31 3.7
sp|Q12585|CP52T_CANMA Cytochrome P450 52D1 OS=Candida maltosa GN... 30 6.3

>sp|Q9S9U6|1A111_ARATH 1-aminocyclopropane-1-carboxylate synthase 11
OS=Arabidopsis thaliana GN=ACS11 PE=1 SV=1
Length = 460

Score = 30.8 bits (68), Expect = 3.7
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -1

Query: 455 FVAGLLNRGNEM*ISVPSKPISFG-VSRRIKHVTASLLSTDAF 330
F GL+ NE +S +K SFG +S + +H+ A+LLS + F
Sbjct: 274 FRVGLIYSNNEKVVSAATKMSSFGLISSQTQHLLANLLSDERF 316


>sp|Q12585|CP52T_CANMA Cytochrome P450 52D1 OS=Candida maltosa
GN=CYP52D1 PE=2 SV=1
Length = 505

Score = 30.0 bits (66), Expect = 6.3
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2

Query: 116 SGGH*TCLSRHHLYKELQVLLRRPADCLTACFLQPNLTPYLP 241
+GG CL + E +L R A C T LQPN Y P
Sbjct: 440 NGGPRICLGQQFALTEASYVLTRLAQCYTKISLQPNSFEYPP 481


tr_hit_id B5CPZ4
Definition tr|B5CPZ4|B5CPZ4_9FIRM Putative uncharacterized protein OS=Ruminococcus lactaris ATCC 29176
Align length 25
Score (bit) 33.1
E-value 7.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919304|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_E07.
(500 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B5CPZ4|B5CPZ4_9FIRM Putative uncharacterized protein OS=Rumin... 33 7.4
tr|A6CZJ3|A6CZJ3_9VIBR Rhs-family protein OS=Vibrio shilonii AK1... 33 7.4

>tr|B5CPZ4|B5CPZ4_9FIRM Putative uncharacterized protein
OS=Ruminococcus lactaris ATCC 29176 GN=RUMLAC_01539
PE=4 SV=1
Length = 62

Score = 33.1 bits (74), Expect = 7.4
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +1

Query: 19 CNVVQESHFFSPGQHTSLVGISSHF 93
C +++ +HF +P Q++ +VG+SSHF
Sbjct: 17 CGLLRATHFHNPTQYSHIVGLSSHF 41


>tr|A6CZJ3|A6CZJ3_9VIBR Rhs-family protein OS=Vibrio shilonii AK1
GN=VSAK1_06015 PE=4 SV=1
Length = 663

Score = 33.1 bits (74), Expect = 7.4
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2

Query: 188 ADCLTACFLQPNLTPYLPLIVLRP*SSLGYGSVTENTTSVAVSPRAQGR 334
++C T + PN TPYLP ++ +P + +V TS +S QGR
Sbjct: 340 SNCQTQITVVPNSTPYLPAVIDKPSIQGVHNAVVAGKTSGDISQDDQGR 388