BP919307
Clone id YMU001_000123_E10
Library
Length 176
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000123_E10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGAAGGTATTTGCATGAAGTAAATAGCTTTGAACAGAGTGCCGTTTGGAACGCCAGCTCT
ACAAGTTGCTGCCAGCCTTCAAAGCACCATGGCAGGCACGGTGAGCCCTTGTATAGGTCC
CTCCTAAAATCTCATCATTGTTCTCCACATTCCTTCGTGGAGCACATTGAAGGAGC
■■Homology search results ■■ -
sp_hit_id Q9YHC5
Definition sp|Q9YHC5|FOXG1_XENLA Forkhead box protein G1 OS=Xenopus laevis
Align length 44
Score (bit) 30.0
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919307|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_E10.
(162 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9YHC5|FOXG1_XENLA Forkhead box protein G1 OS=Xenopus laevis ... 30 3.8
sp|P22175|VNCA_MSTV Major non-capsid protein OS=Maize stripe vir... 29 8.4
sp|Q98UF7|PCX1_FUGRU Pecanex-like protein 1 OS=Fugu rubripes GN=... 29 8.4

>sp|Q9YHC5|FOXG1_XENLA Forkhead box protein G1 OS=Xenopus laevis
GN=foxg1 PE=2 SV=1
Length = 436

Score = 30.0 bits (66), Expect = 3.8
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2

Query: 5 VNSFEQSAVWNASSTSCCQPSKHHGRHGEPLYRSLLKSHHCSPH 136
+NS AV N + QP HH +P + L + HH PH
Sbjct: 20 INSLMPEAVQNDNHP---QPHHHHHHQQQPQHLQLPQQHHLQPH 60


>sp|P22175|VNCA_MSTV Major non-capsid protein OS=Maize stripe virus
PE=1 SV=1
Length = 176

Score = 28.9 bits (63), Expect = 8.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2

Query: 53 CCQPSKHHGRHGEPLYRSLLKSHHCSPHSFVEHIEG 160
C + + HH +PL+ S+ K HSF+EH+ G
Sbjct: 55 CVETAYHHPLETDPLFASVHKHLPDFCHSFLEHLLG 90


>sp|Q98UF7|PCX1_FUGRU Pecanex-like protein 1 OS=Fugu rubripes GN=pcnx
PE=3 SV=1
Length = 1703

Score = 28.9 bits (63), Expect = 8.4
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2

Query: 20 QSAVWNASSTSCCQPSKHHGRHGEPLYRSLLKSHHCSPHSFVEHIEG 160
+ A+ N ++SC QP G P+Y S L + +C+ H + HI G
Sbjct: 1383 KQALRNMINSSCDQPI------GYPIYVSPLTTSYCNSHPQLRHILG 1423


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919307|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_E10.
(162 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******