BP919309
Clone id YMU001_000123_F02
Library
Length 495
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000123_F02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTTTTTTTTTTCTTTTGTGGTGATGAAAGATCTTACAAGGACTTTTTCCAACCAAACA
ACAAAAGTGTTCCTATTCCAGAAAGCTTGCTCAAGGGTAAGCAACAGGTATCATGCAAGT
ATTTTCACTCTTTTGGAATACTTGCAAAGAACATACCTGCCACCAATAGCAGAAGCATAA
GTACAATGAAACATTGGCACCCAGTTTGAATACATGCAGTTACTGCAATAACTGCATCAG
ATAGTTGAGCCATATCGAAGAATTGACCATCTACAATACCCTTTGGATCTGGATCAGTAA
TGACTTTTTCTCAATATACATAAAGATTAAACATTTCGATACCCTCAGCACAAGCTCAAC
CTTTTAATGCAATGGTTGTACAGTCCTGCGCAATAGACAAATTTACAGCGTCAATCAACT
GCTGGGTCTTCATTGCTATAGTGGACCATAGGGGATCCACACCTGTTGAGCCATTCTCGA
TCCCTTTAACGAGAC
■■Homology search results ■■ -
sp_hit_id Q9SZ83
Definition sp|Q9SZ83|Y4967_ARATH Uncharacterized oxidoreductase At4g09670 OS=Arabidopsis thaliana
Align length 45
Score (bit) 33.5
E-value 0.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919309|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_F02.
(477 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9SZ83|Y4967_ARATH Uncharacterized oxidoreductase At4g09670 O... 33 0.50
sp|P09825|NIFB_RHILE FeMo cofactor biosynthesis protein nifB (Fr... 30 5.5
sp|Q53205|NIFB_RHISN FeMo cofactor biosynthesis protein nifB OS=... 29 9.4
sp|O74384|ERFB_SCHPO Palmitoyltransferase erf2 OS=Schizosaccharo... 29 9.4
sp|Q54MP2|CCD22_DICDI Coiled-coil domain-containing protein 22 h... 29 9.4

>sp|Q9SZ83|Y4967_ARATH Uncharacterized oxidoreductase At4g09670
OS=Arabidopsis thaliana GN=At4g09670 PE=1 SV=1
Length = 362

Score = 33.5 bits (75), Expect = 0.50
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = -3

Query: 475 LVKGIENGSTGVDPLWSTIAMKTQQLIDAVNLSIAQDCTTIALKG 341
LV I+N D W +I+ KTQ ++DAV S+ ++ I+L G
Sbjct: 317 LVGEIKNNGAKPDGYWPSISRKTQLVVDAVKESVDKNYQQISLSG 361


>sp|P09825|NIFB_RHILE FeMo cofactor biosynthesis protein nifB
(Fragment) OS=Rhizobium leguminosarum GN=nifB PE=3 SV=1
Length = 162

Score = 30.0 bits (66), Expect = 5.5
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Frame = +2

Query: 116 WNTCKEHTCHQ*QKHKY----NETLAPSLN-TCSYCN 211
W K+H C Q H Y + +AP+ N C+YCN
Sbjct: 23 WERIKDHPCFSEQAHHYFARMHVAVAPACNIQCNYCN 59


>sp|Q53205|NIFB_RHISN FeMo cofactor biosynthesis protein nifB
OS=Rhizobium sp. (strain NGR234) GN=nifB PE=3 SV=1
Length = 493

Score = 29.3 bits (64), Expect = 9.4
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Frame = +2

Query: 107 SLFWNTCKEHTCHQ*QKHKY----NETLAPSLN-TCSYCN 211
S W K+H C + H Y + +AP+ N C+YCN
Sbjct: 45 SATWEKIKDHPCFSEEAHHYFARMHVAVAPACNIQCNYCN 84


>sp|O74384|ERFB_SCHPO Palmitoyltransferase erf2
OS=Schizosaccharomyces pombe GN=erf2 PE=1 SV=1
Length = 350

Score = 29.3 bits (64), Expect = 9.4
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2

Query: 107 SLFWNTCKEHTCHQ*QKHKYNETLAPSLNTCSYCNNCIR*LSH 235
S+F NT HTCH + P + C C+NC+ L H
Sbjct: 176 SVFVNTVYCHTCHLYRP--------PRASHCHLCDNCVEYLDH 210


>sp|Q54MP2|CCD22_DICDI Coiled-coil domain-containing protein 22
homolog OS=Dictyostelium discoideum GN=DDB_G0285813 PE=3
SV=1
Length = 637

Score = 29.3 bits (64), Expect = 9.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2

Query: 218 CSYCSNCMYSNWVPMFHCTYASAIGGRY 135
C Y C+ +W+P F C ++ I G Y
Sbjct: 127 CQYLQGCVKESWIPYF-CPFSKRIPGNY 153


tr_hit_id A9TAR5
Definition tr|A9TAR5|A9TAR5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 43
Score (bit) 41.2
E-value 0.026
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919309|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_F02.
(477 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TAR5|A9TAR5_PHYPA Predicted protein OS=Physcomitrella paten... 41 0.026
tr|A9RHY9|A9RHY9_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.044
tr|A9SRB6|A9SRB6_PHYPA Predicted protein (Fragment) OS=Physcomit... 37 0.38
tr|Q9C8D3|Q9C8D3_ARATH Oxidoreductase, putative OS=Arabidopsis t... 36 0.84
tr|B8LP22|B8LP22_PICSI Putative uncharacterized protein OS=Picea... 35 1.4
tr|B7FJM8|B7FJM8_MEDTR Putative uncharacterized protein OS=Medic... 34 3.2
tr|B7FI94|B7FI94_MEDTR Putative uncharacterized protein OS=Medic... 34 3.2
tr|A9NZF1|A9NZF1_PICSI Putative uncharacterized protein OS=Picea... 34 4.2
tr|Q17KF1|Q17KF1_AEDAE Putative uncharacterized protein OS=Aedes... 34 4.2
tr|A4TZU0|A4TZU0_9PROT FeMo cofactor biosynthesis protein OS=Mag... 33 5.4
tr|B6ACX5|B6ACX5_9CRYT Phospholipase A-2-activating protein, put... 33 5.4
tr|B0XJC0|B0XJC0_CULQU WD repeat domain 70 OS=Culex quinquefasci... 33 9.2

>tr|A9TAR5|A9TAR5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_110284 PE=4 SV=1
Length = 357

Score = 41.2 bits (95), Expect = 0.026
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = -3

Query: 475 LVKGIENGSTGVDPLWSTIAMKTQQLIDAVNLSIAQDCTTIAL 347
LV GI +G+ +PLWSTIA TQ L++AV SI C I L
Sbjct: 315 LVGGILDGTGKPEPLWSTIARNTQILLNAVKASIESYCQPITL 357


>tr|A9RHY9|A9RHY9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_175112 PE=4 SV=1
Length = 362

Score = 40.4 bits (93), Expect = 0.044
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = -3

Query: 475 LVKGIENGSTGVDPLWSTIAMKTQQLIDAVNLSIAQDCTTIAL 347
LV I NG+ V+P WS I++KTQ +++AV SI TI L
Sbjct: 320 LVANIRNGTGAVEPKWSEISVKTQMVLNAVKQSIENGLKTINL 362


>tr|A9SRB6|A9SRB6_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_134039 PE=4 SV=1
Length = 503

Score = 37.4 bits (85), Expect = 0.38
Identities = 23/73 (31%), Positives = 38/73 (52%)
Frame = +2

Query: 194 TCSYCNNCIR*LSHIEELTIYNTLWIWISNDFFSIYIKIKHFDTLSTSSTF*CNGCTVLR 373
T Y N C R +S EL + +L I+ +D++S+ + D L++ +T NGC+ L
Sbjct: 207 TTLYMNRCSRLISLPNELETFQSLTIFDISDYYSLTTLLNELDYLTSLTTLNMNGCSSL- 265

Query: 374 NRQIYSVNQLLGL 412
I +N+L L
Sbjct: 266 ---ILLLNELSNL 275


>tr|Q9C8D3|Q9C8D3_ARATH Oxidoreductase, putative OS=Arabidopsis
thaliana GN=At1g66130 PE=4 SV=1
Length = 364

Score = 36.2 bits (82), Expect = 0.84
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -3

Query: 475 LVKGIENGSTGVDPLWSTIAMKTQQLIDAVNLSIAQDCTTIAL 347
LV+GI+ G D W I+ KTQ ++DAV S+ C + L
Sbjct: 322 LVEGIKRGDLEADRRWPDISKKTQLIVDAVKKSVDIGCEVVHL 364


>tr|B8LP22|B8LP22_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 363

Score = 35.4 bits (80), Expect = 1.4
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -3

Query: 475 LVKGIENGSTGVDPLWSTIAMKTQQLIDAVNLSI 374
+VK I +G +DP W +I KTQ L++AV SI
Sbjct: 320 IVKNIRDGEGKIDPFWPSITRKTQVLVNAVMESI 353


>tr|B7FJM8|B7FJM8_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 363

Score = 34.3 bits (77), Expect = 3.2
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = -3

Query: 475 LVKGIENGSTGVDPLWSTIAMKTQQLIDAVNLSI 374
LV GI+ G++ V+ W+ I+ KTQ +IDAV SI
Sbjct: 319 LVGGIKYGNSKVENKWAIISRKTQVVIDAVKASI 352


>tr|B7FI94|B7FI94_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 363

Score = 34.3 bits (77), Expect = 3.2
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = -3

Query: 475 LVKGIENGSTGVDPLWSTIAMKTQQLIDAVNLSI 374
LV GI+ G++ V+ W+ I+ KTQ +IDAV SI
Sbjct: 319 LVGGIKYGNSKVENKWAIISRKTQVVIDAVKASI 352


>tr|A9NZF1|A9NZF1_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 369

Score = 33.9 bits (76), Expect = 4.2
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3

Query: 475 LVKGIENGSTGVDPLWSTIAMKTQQLIDAVNLSIAQDCTTIAL 347
LVK I + D WS I KTQ L++AVN SI + ++ L
Sbjct: 327 LVKSIRDIGAKPDLQWSAITRKTQILVNAVNTSIKEGLISVTL 369


>tr|Q17KF1|Q17KF1_AEDAE Putative uncharacterized protein OS=Aedes
aegypti GN=AAEL001729 PE=4 SV=1
Length = 653

Score = 33.9 bits (76), Expect = 4.2
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +3

Query: 30 FQPNNKSVPIPESLLKGKQQVSCKYF--HSFGILAKNIPATNSRSISTMKHWHP 185
F P++ V ESL KG++Q + +F +F +A IP T+S I T HWHP
Sbjct: 436 FSPDDTMVLTGESLPKGQKQANLYFFDTKTFETVA-TIPITDSHVIRT--HWHP 486


>tr|A4TZU0|A4TZU0_9PROT FeMo cofactor biosynthesis protein
OS=Magnetospirillum gryphiswaldense GN=nifB PE=4 SV=1
Length = 490

Score = 33.5 bits (75), Expect = 5.4
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +2

Query: 44 QKCSYSRKLAQG*ATGIMQVFSLFWNTCKEHTCHQ*QKHKY----NETLAPSLN-TCSYC 208
Q S K + G + G ++ WN K+H C+ + H Y + +AP+ N C+YC
Sbjct: 19 QTSGCSTKSSCGSSAGQGEMPEHVWNKIKDHPCYSEEAHHYFARMHVAVAPACNIQCNYC 78

Query: 209 N 211
N
Sbjct: 79 N 79