BP919309 |
Clone id |
YMU001_000123_F02 |
Library |
YMU01 |
Length |
495 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000123_F02. |
Accession |
BP919309 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TTTTTTTTTTTTTCTTTTGTGGTGATGAAAGATCTTACAAGGACTTTTTCCAACCAAACA ACAAAAGTGTTCCTATTCCAGAAAGCTTGCTCAAGGGTAAGCAACAGGTATCATGCAAGT ATTTTCACTCTTTTGGAATACTTGCAAAGAACATACCTGCCACCAATAGCAGAAGCATAA GTACAATGAAACATTGGCACCCAGTTTGAATACATGCAGTTACTGCAATAACTGCATCAG ATAGTTGAGCCATATCGAAGAATTGACCATCTACAATACCCTTTGGATCTGGATCAGTAA TGACTTTTTCTCAATATACATAAAGATTAAACATTTCGATACCCTCAGCACAAGCTCAAC CTTTTAATGCAATGGTTGTACAGTCCTGCGCAATAGACAAATTTACAGCGTCAATCAACT GCTGGGTCTTCATTGCTATAGTGGACCATAGGGGATCCACACCTGTTGAGCCATTCTCGA TCCCTTTAACGAGAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SZ83 |
Definition |
sp|Q9SZ83|Y4967_ARATH Uncharacterized oxidoreductase At4g09670 OS=Arabidopsis thaliana |
Align length |
45 |
Score (bit) |
33.5 |
E-value |
0.5 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TAR5 |
Definition |
tr|A9TAR5|A9TAR5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
43 |
Score (bit) |
41.2 |
E-value |
0.026 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919309|Adiantum capillus-veneris mRNA, clone: YMU001_000123_F02. (477 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TAR5|A9TAR5_PHYPA Predicted protein OS=Physcomitrella paten... 41 0.026 tr|A9RHY9|A9RHY9_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.044 tr|A9SRB6|A9SRB6_PHYPA Predicted protein (Fragment) OS=Physcomit... 37 0.38 tr|Q9C8D3|Q9C8D3_ARATH Oxidoreductase, putative OS=Arabidopsis t... 36 0.84 tr|B8LP22|B8LP22_PICSI Putative uncharacterized protein OS=Picea... 35 1.4 tr|B7FJM8|B7FJM8_MEDTR Putative uncharacterized protein OS=Medic... 34 3.2 tr|B7FI94|B7FI94_MEDTR Putative uncharacterized protein OS=Medic... 34 3.2 tr|A9NZF1|A9NZF1_PICSI Putative uncharacterized protein OS=Picea... 34 4.2 tr|Q17KF1|Q17KF1_AEDAE Putative uncharacterized protein OS=Aedes... 34 4.2 tr|A4TZU0|A4TZU0_9PROT FeMo cofactor biosynthesis protein OS=Mag... 33 5.4 tr|B6ACX5|B6ACX5_9CRYT Phospholipase A-2-activating protein, put... 33 5.4 tr|B0XJC0|B0XJC0_CULQU WD repeat domain 70 OS=Culex quinquefasci... 33 9.2
>tr|A9TAR5|A9TAR5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_110284 PE=4 SV=1 Length = 357
Score = 41.2 bits (95), Expect = 0.026 Identities = 22/43 (51%), Positives = 27/43 (62%) Frame = -3
Query: 475 LVKGIENGSTGVDPLWSTIAMKTQQLIDAVNLSIAQDCTTIAL 347 LV GI +G+ +PLWSTIA TQ L++AV SI C I L Sbjct: 315 LVGGILDGTGKPEPLWSTIARNTQILLNAVKASIESYCQPITL 357
>tr|A9RHY9|A9RHY9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_175112 PE=4 SV=1 Length = 362
Score = 40.4 bits (93), Expect = 0.044 Identities = 20/43 (46%), Positives = 27/43 (62%) Frame = -3
Query: 475 LVKGIENGSTGVDPLWSTIAMKTQQLIDAVNLSIAQDCTTIAL 347 LV I NG+ V+P WS I++KTQ +++AV SI TI L Sbjct: 320 LVANIRNGTGAVEPKWSEISVKTQMVLNAVKQSIENGLKTINL 362
>tr|A9SRB6|A9SRB6_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_134039 PE=4 SV=1 Length = 503
Score = 37.4 bits (85), Expect = 0.38 Identities = 23/73 (31%), Positives = 38/73 (52%) Frame = +2
Query: 194 TCSYCNNCIR*LSHIEELTIYNTLWIWISNDFFSIYIKIKHFDTLSTSSTF*CNGCTVLR 373 T Y N C R +S EL + +L I+ +D++S+ + D L++ +T NGC+ L Sbjct: 207 TTLYMNRCSRLISLPNELETFQSLTIFDISDYYSLTTLLNELDYLTSLTTLNMNGCSSL- 265
Query: 374 NRQIYSVNQLLGL 412 I +N+L L Sbjct: 266 ---ILLLNELSNL 275
>tr|Q9C8D3|Q9C8D3_ARATH Oxidoreductase, putative OS=Arabidopsis thaliana GN=At1g66130 PE=4 SV=1 Length = 364
Score = 36.2 bits (82), Expect = 0.84 Identities = 17/43 (39%), Positives = 24/43 (55%) Frame = -3
Query: 475 LVKGIENGSTGVDPLWSTIAMKTQQLIDAVNLSIAQDCTTIAL 347 LV+GI+ G D W I+ KTQ ++DAV S+ C + L Sbjct: 322 LVEGIKRGDLEADRRWPDISKKTQLIVDAVKKSVDIGCEVVHL 364
>tr|B8LP22|B8LP22_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 363
Score = 35.4 bits (80), Expect = 1.4 Identities = 16/34 (47%), Positives = 22/34 (64%) Frame = -3
Query: 475 LVKGIENGSTGVDPLWSTIAMKTQQLIDAVNLSI 374 +VK I +G +DP W +I KTQ L++AV SI Sbjct: 320 IVKNIRDGEGKIDPFWPSITRKTQVLVNAVMESI 353
>tr|B7FJM8|B7FJM8_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 363
Score = 34.3 bits (77), Expect = 3.2 Identities = 17/34 (50%), Positives = 24/34 (70%) Frame = -3
Query: 475 LVKGIENGSTGVDPLWSTIAMKTQQLIDAVNLSI 374 LV GI+ G++ V+ W+ I+ KTQ +IDAV SI Sbjct: 319 LVGGIKYGNSKVENKWAIISRKTQVVIDAVKASI 352
>tr|B7FI94|B7FI94_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 363
Score = 34.3 bits (77), Expect = 3.2 Identities = 17/34 (50%), Positives = 24/34 (70%) Frame = -3
Query: 475 LVKGIENGSTGVDPLWSTIAMKTQQLIDAVNLSI 374 LV GI+ G++ V+ W+ I+ KTQ +IDAV SI Sbjct: 319 LVGGIKYGNSKVENKWAIISRKTQVVIDAVKASI 352
>tr|A9NZF1|A9NZF1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 369
Score = 33.9 bits (76), Expect = 4.2 Identities = 18/43 (41%), Positives = 24/43 (55%) Frame = -3
Query: 475 LVKGIENGSTGVDPLWSTIAMKTQQLIDAVNLSIAQDCTTIAL 347 LVK I + D WS I KTQ L++AVN SI + ++ L Sbjct: 327 LVKSIRDIGAKPDLQWSAITRKTQILVNAVNTSIKEGLISVTL 369
>tr|Q17KF1|Q17KF1_AEDAE Putative uncharacterized protein OS=Aedes aegypti GN=AAEL001729 PE=4 SV=1 Length = 653
Score = 33.9 bits (76), Expect = 4.2 Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%) Frame = +3
Query: 30 FQPNNKSVPIPESLLKGKQQVSCKYF--HSFGILAKNIPATNSRSISTMKHWHP 185 F P++ V ESL KG++Q + +F +F +A IP T+S I T HWHP Sbjct: 436 FSPDDTMVLTGESLPKGQKQANLYFFDTKTFETVA-TIPITDSHVIRT--HWHP 486
>tr|A4TZU0|A4TZU0_9PROT FeMo cofactor biosynthesis protein OS=Magnetospirillum gryphiswaldense GN=nifB PE=4 SV=1 Length = 490
Score = 33.5 bits (75), Expect = 5.4 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 5/61 (8%) Frame = +2
Query: 44 QKCSYSRKLAQG*ATGIMQVFSLFWNTCKEHTCHQ*QKHKY----NETLAPSLN-TCSYC 208 Q S K + G + G ++ WN K+H C+ + H Y + +AP+ N C+YC Sbjct: 19 QTSGCSTKSSCGSSAGQGEMPEHVWNKIKDHPCYSEEAHHYFARMHVAVAPACNIQCNYC 78
Query: 209 N 211 N Sbjct: 79 N 79
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