BP919314
Clone id YMU001_000123_F07
Library
Length 555
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000123_F07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GTTTAGGGCCTTGGATACAATCAGGACGGAGATGAGCACTCAGGCAGCTGATGAAGGTGG
CGTGGCTGTGGCCCAGTGCCCGAGAATGACAGAAGATCTTAACAAGTCACCAGCATGCTG
TGATAAATAGTGGAGCAGAGCAGAGTAGCAGTGACAATACATGCTGAAATCCCACTTTCA
GATCCACTCCGGAATATACACAGGCGATTCGAGGATGCACAATCCGTGTGACCTCAACTT
TGTTCATATTGCACTAGTAGATGCAATGGGAGGAGAAGCGTTGGAATAGGGAGTTGCTTG
TCAAACATAGAAACTACTTCTATTGTACGTTTTTGGGCAATCGACATGGAGGTTGTTCTG
GTTAAATCCAATGGACCAGCCTCGCAAGCTCGTATGTCATTAAATGAAGAGACAAACCTA
AGAGGATTCACAGAGAGGAAAGGTATATTTTATATAGAACGGTCTCTTATATAGGGGTAA
AAAGGGTGTCTCTCATGTATGTAGGTGATGCCCCTTATTATTACTAGTTAATTCGATTGG
GGCATGGTCTCATGT
■■Homology search results ■■ -
sp_hit_id Q2M389
Definition sp|Q2M389|K1033_HUMAN UPF0681 protein KIAA1033 OS=Homo sapiens
Align length 47
Score (bit) 32.3
E-value 1.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919314|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_F07.
(555 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q2M389|K1033_HUMAN UPF0681 protein KIAA1033 OS=Homo sapiens G... 32 1.6
sp|Q8RWB8|UPL6_ARATH E3 ubiquitin-protein ligase UPL6 OS=Arabido... 31 3.5
sp|O96028|NSD2_HUMAN Probable histone-lysine N-methyltransferase... 31 4.6
sp|Q3UMB9|K1033_MOUSE UPF0681 protein KIAA1033 OS=Mus musculus G... 31 4.6

>sp|Q2M389|K1033_HUMAN UPF0681 protein KIAA1033 OS=Homo sapiens
GN=KIAA1033 PE=1 SV=1
Length = 1173

Score = 32.3 bits (72), Expect = 1.6
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = -2

Query: 500 IHERHPFYPYIRDRSI*NIPFLSVNPLRFVSSFNDIRACEAGPLDLT 360
+ +R+PF ++D ++ F S+NP+RF + F DIRA LD T
Sbjct: 694 LDDRNPFKVGMKDLAL----FFSLNPIRFFNRFIDIRAYVTHYLDKT 736


>sp|Q8RWB8|UPL6_ARATH E3 ubiquitin-protein ligase UPL6
OS=Arabidopsis thaliana GN=UPL6 PE=2 SV=1
Length = 1029

Score = 31.2 bits (69), Expect = 3.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2

Query: 317 LLLYVFGQSTWRLFWLNPMDQP 382
LL+ + Q+ W+L W+NP+ QP
Sbjct: 537 LLIIILKQALWQLLWVNPLTQP 558


>sp|O96028|NSD2_HUMAN Probable histone-lysine N-methyltransferase
NSD2 OS=Homo sapiens GN=WHSC1 PE=1 SV=1
Length = 1365

Score = 30.8 bits (68), Expect = 4.6
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = -2

Query: 227 TDCASSNRLCIFRSGSESGISACIVTATLLCSTIYHSMLVTC*DLLSFSGTGPQPRHLHQ 48
++CAS C S++ + C+VT C YH V L F G + LH
Sbjct: 708 SECASGIHSCFVCKESKTDVKRCVVTQ---CGKFYHEACVKKYPLTVFESRGFR-CPLHS 763

Query: 47 LPECSSPS*LYPRP 6
C + + PRP
Sbjct: 764 CVSCHASNPSNPRP 777


>sp|Q3UMB9|K1033_MOUSE UPF0681 protein KIAA1033 OS=Mus musculus
GN=Kiaa1033 PE=2 SV=2
Length = 1173

Score = 30.8 bits (68), Expect = 4.6
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -2

Query: 500 IHERHPFYPYIRDRSI*NIPFLSVNPLRFVSSFNDIRACEAGPLDLT 360
+ +R+PF +D ++ F S+NP+RF + F DIRA LD T
Sbjct: 694 LDDRNPFKVGRKDLAL----FFSLNPIRFFNRFIDIRAYVTHYLDKT 736


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919314|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_F07.
(555 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******