BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919329|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_G11.
         (527 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LUK1|FB275_ARATH Putative F-box protein At5g40050 OS=Arabid...    34   0.49 
sp|Q3KQV3|ZN792_HUMAN Zinc finger protein 792 OS=Homo sapiens GN...    31   4.1  
sp|Q642P2|DOP2_XENLA Protein dopey-2 OS=Xenopus laevis GN=dopey2...    30   5.4  
sp|Q0VD19|ASM_BOVIN Sphingomyelin phosphodiesterase OS=Bos tauru...    30   5.4  
sp|Q0VS81|ISPE_ALCBS 4-diphosphocytidyl-2-C-methyl-D-erythritol ...    30   9.2  
sp|Q3UHQ6|DOP2_MOUSE Protein dopey-2 OS=Mus musculus GN=Dopey2 P...    30   9.2  

>sp|Q9LUK1|FB275_ARATH Putative F-box protein At5g40050
           OS=Arabidopsis thaliana GN=At5g40050 PE=4 SV=1
          Length = 302

 Score = 33.9 bits (76), Expect = 0.49
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
 Frame = -1

Query: 500 PHKSAHNVKKEEI*TLTTHKEGVHAPVVASLTTKDPHITLMVMNCYLSCRY----HLHSV 333
           PH  AHN+KK  +     +   V AP + S+ T  P++  +  + YL+C Y    H + +
Sbjct: 142 PHYIAHNIKKLTV----CYNNDVQAPRILSIYT--PNLVYLDYSDYLTCLYNSENHFNDL 195

Query: 332 TSYTLSLRFTSASK 291
               L L F  A +
Sbjct: 196 LEARLDLAFARAGR 209


>sp|Q3KQV3|ZN792_HUMAN Zinc finger protein 792 OS=Homo sapiens
           GN=ZNF792 PE=2 SV=2
          Length = 632

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 468 RNMNTHNP*RGSSCTSCGQPYNQRPS 391
           +++  H P R   C+ CG+ +NQRP+
Sbjct: 551 QHLKVHKPDRPYECSECGKAFNQRPT 576


>sp|Q642P2|DOP2_XENLA Protein dopey-2 OS=Xenopus laevis GN=dopey2
           PE=2 SV=1
          Length = 2270

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = -2

Query: 220 SNTSKPQWFASTAAKCCCISVLHLPSICLMQTLTLLISHLCRHSLPAVY*LKRT 59
           S+ S P WF +    CCC+   ++ ++ +  TL  +I+H    SL     +KR+
Sbjct: 773 SDVSFPLWFKTLMMVCCCVKDCYIQNVAI-STLLEVINHSQSLSLVLADRMKRS 825


>sp|Q0VD19|ASM_BOVIN Sphingomyelin phosphodiesterase OS=Bos taurus
           GN=SMPD1 PE=2 SV=1
          Length = 625

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = -2

Query: 259 TCSACFGTITFPPSNTSKPQWFASTAAKCCCISVLHLPSIC 137
           TC   F  I F   N +   W  S A K C +  +  P++C
Sbjct: 87  TCKGLFTAIDFGLRNQASVAWVGSVAIKLCVLLKIAPPAVC 127


>sp|Q0VS81|ISPE_ALCBS 4-diphosphocytidyl-2-C-methyl-D-erythritol
           kinase OS=Alcanivorax borkumensis (strain SK2 / ATCC
           700651 / DSM 11573) GN=ispE PE=3 SV=1
          Length = 301

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
 Frame = -2

Query: 361 YRADITFILSHHIP*A*DSLQHLKSHTFDYHIAATCSACFGTITFPPSN----TSKPQWF 194
           +  D   + + H P    +L  LK HT +  +  T + CF  +T            PQ +
Sbjct: 208 FHNDCEAVATQHFPEIGKTLDWLKQHTGNARMTGTGACCFSRLTGLQQGQQLLQQLPQHW 267

Query: 193 ASTAAKCCCISVLH 152
               A+ C  S LH
Sbjct: 268 TGFVARSCNTSPLH 281


>sp|Q3UHQ6|DOP2_MOUSE Protein dopey-2 OS=Mus musculus GN=Dopey2 PE=2
           SV=2
          Length = 2295

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 220 SNTSKPQWFASTAAKCCCISVLHLPSICLMQTLTLLISH 104
           S+ S P W  S    CCC+S   L +I +  TL  +I+H
Sbjct: 784 SDCSFPPWLKSLMTICCCVSDCSLQNIAI-ATLLEVINH 821

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919329|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_G11.
         (527 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******