BP919330
Clone id YMU001_000123_H01
Library
Length 532
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000123_H01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CATTAATTTCAAACAAAGGGGTAGCATCTTCATGGCTAAAAACTAAGAAGTCTACCACTC
TTTTGTTACACCTTCCTATAAAGAAAACCATGATTGCAACCACTTTAGCACACACACTCA
CACATGCGCGCACGCGCACACGGGGGTGACCTTAACAAAGAGTGCAAACAAGGACTAGCA
TGCACAAAACACATACAAAACACACATCCAAACACAGCTATACTATATTTCTCCGTTCAC
TTACTCTCATGGGAAGATAGCGAGCAGGAGACACGTTCGAGATTTATGATGTTTCTCTCT
AAGAGTCTTCCCATATAGACCAAGAACTCCTCCTCATCATAGCCATGGACAGGGCTTAGC
TCTATCTTCCATGTGACCAAAGCATGCCCATTGTTGCAAGGATCCGACAACGAGAAAGAC
GCGGTGTAGTTCTTAAAACCCAAATTACTGTCCAAAATGGAGTAAGAGAACTCTCTTAAA
CGAGGGTCCCATTCCAAGAGCTGCTCCTTCACCCACACTAAATTTCTGTCAT
■■Homology search results ■■ -
sp_hit_id P59082
Definition sp|P59082|LFS_ALLCE Lachrymatory-factor synthase OS=Allium cepa
Align length 64
Score (bit) 35.0
E-value 0.22
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919330|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_H01.
(532 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P59082|LFS_ALLCE Lachrymatory-factor synthase OS=Allium cepa ... 35 0.22
sp|Q5LJP9|ASND1_DROME Asparagine synthetase domain-containing pr... 31 4.2
sp|Q9ULG1|INO80_HUMAN Putative DNA helicase INO80 complex homolo... 30 7.3
sp|Q6HP30|ARGR1_BACHK Arginine regulator OS=Bacillus thuringiens... 30 9.4
sp|Q81II2|ARGR1_BACCR Arginine regulator OS=Bacillus cereus (str... 30 9.4
sp|Q73E88|ARGR1_BACC1 Arginine regulator OS=Bacillus cereus (str... 30 9.4

>sp|P59082|LFS_ALLCE Lachrymatory-factor synthase OS=Allium cepa
GN=LFS PE=1 SV=1
Length = 169

Score = 35.0 bits (79), Expect = 0.22
Identities = 15/64 (23%), Positives = 30/64 (46%)
Frame = -3

Query: 515 WVKEQLLEWDPRLREFSYSILDSNLGFKNYTASFSLSDPCNNGHALVTWKIELSPVHGYD 336
W KE+L+ D + +SY + G+++YTA+ + + + + W + + G
Sbjct: 85 WAKEKLVALDNKNMSYSYIFTECFTGYEDYTATMQIVEGPEHKGSRFDWSFQCKYIEGMT 144

Query: 335 EEEF 324
E F
Sbjct: 145 ESAF 148


>sp|Q5LJP9|ASND1_DROME Asparagine synthetase domain-containing
protein CG17486 OS=Drosophila melanogaster GN=CG17486
PE=1 SV=2
Length = 564

Score = 30.8 bits (68), Expect = 4.2
Identities = 32/132 (24%), Positives = 51/132 (38%), Gaps = 5/132 (3%)
Frame = -3

Query: 500 LLEWDPRLREFSYSIL---DSNLGFKNYTASFSLSDPCNNGHALVTWKIELSPVHGYDEE 330
L W P L +S +L D +G+K S D W + +P Y+
Sbjct: 187 LYPWQP-LNNYSTQLLRNLDLAIGWKTAVESPMSPD----------WMLNCNPAFSYNFY 235

Query: 329 EFLVYMGRL-LERNIINLERVSCSLSSHESK*TEKYSIAVFGCV-FCMCFVHASPCLHSL 156
EF + L +N+I+ + +LS + ++ V FC C+ L
Sbjct: 236 EFQYIKNNVNLYKNLIDQSEIKYTLSILHTLLSDSIKNRVRNMAPFCRL------CMQKL 289

Query: 155 LRSPPCARARMC 120
SPPC A++C
Sbjct: 290 NISPPCRHAKLC 301


>sp|Q9ULG1|INO80_HUMAN Putative DNA helicase INO80 complex homolog 1
OS=Homo sapiens GN=INO80 PE=1 SV=2
Length = 1556

Score = 30.0 bits (66), Expect = 7.3
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2

Query: 203 HIQTQLYYISPFTYSHGKIASRRHVRD 283
HI + Y+IS F Y HG+I H RD
Sbjct: 832 HISLKPYHISKFIYRHGQIRVFNHSRD 858


>sp|Q6HP30|ARGR1_BACHK Arginine regulator OS=Bacillus thuringiensis
subsp. konkukian GN=argR1 PE=3 SV=1
Length = 149

Score = 29.6 bits (65), Expect = 9.4
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3

Query: 429 VLKTQITVQNGVRELS*TRVPFQELLL 509
VL TQ TV +REL+ T+VP QE L+
Sbjct: 34 VLVTQATVSRDIRELNLTKVPSQEGLM 60


>sp|Q81II2|ARGR1_BACCR Arginine regulator OS=Bacillus cereus (strain
ATCC 14579 / DSM 31) GN=argR1 PE=3 SV=1
Length = 149

Score = 29.6 bits (65), Expect = 9.4
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3

Query: 429 VLKTQITVQNGVRELS*TRVPFQELLL 509
VL TQ TV +REL+ T+VP QE L+
Sbjct: 34 VLVTQATVSRDIRELNLTKVPSQEGLM 60


>sp|Q73E88|ARGR1_BACC1 Arginine regulator OS=Bacillus cereus (strain
ATCC 10987) GN=argR1 PE=3 SV=1
Length = 149

Score = 29.6 bits (65), Expect = 9.4
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3

Query: 429 VLKTQITVQNGVRELS*TRVPFQELLL 509
VL TQ TV +REL+ T+VP QE L+
Sbjct: 34 VLVTQATVSRDIRELNVTKVPSQEGLM 60


tr_hit_id A5BHR2
Definition tr|A5BHR2|A5BHR2_VITVI Putative uncharacterized protein (Chromosome chr4 scaffold_6, whole genome shotgun sequence) OS=Vitis vinifera
Align length 73
Score (bit) 60.5
E-value 5.0e-08
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919330|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_H01.
(532 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5BHR2|A5BHR2_VITVI Putative uncharacterized protein (Chromos... 60 5e-08
tr|A7P554|A7P554_VITVI Chromosome chr4 scaffold_6, whole genome ... 58 3e-07
tr|A5BHR3|A5BHR3_VITVI Putative uncharacterized protein OS=Vitis... 58 3e-07
tr|A9PJ81|A9PJ81_POPJC Putative uncharacterized protein OS=Popul... 57 4e-07
tr|Q5JM62|Q5JM62_ORYSJ Putative uncharacterized protein P0042A10... 54 5e-06
tr|A7PEI3|A7PEI3_VITVI Chromosome chr11 scaffold_13, whole genom... 52 2e-05
tr|A2WUM6|A2WUM6_ORYSI Putative uncharacterized protein OS=Oryza... 50 5e-05
tr|B6UBY7|B6UBY7_MAIZE Lachrymatory-factor synthase OS=Zea mays ... 50 9e-05
tr|B6TW34|B6TW34_MAIZE Lachrymatory factor synthase OS=Zea mays ... 49 2e-04
tr|Q9M073|Q9M073_ARATH Putative uncharacterized protein AT4g3287... 47 8e-04
tr|B6TUP7|B6TUP7_MAIZE Lachrymatory-factor synthase OS=Zea mays ... 46 0.001
tr|Q6L4Q0|Q6L4Q0_ORYSJ Os05g0202300 protein OS=Oryza sativa subs... 45 0.003
tr|A2ZQ98|A2ZQ98_ORYSJ Putative uncharacterized protein OS=Oryza... 45 0.003
tr|A2Y1D1|A2Y1D1_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.003
tr|Q8H937|Q8H937_ALLPO Lachrymatory factor synthase OS=Allium am... 43 0.011
tr|A2SEB2|A2SEB2_METPP Putative uncharacterized protein OS=Methy... 42 0.015
tr|O82320|O82320_ARATH Putative uncharacterized protein At2g2577... 42 0.015
tr|B6TSX0|B6TSX0_MAIZE Putative uncharacterized protein OS=Zea m... 42 0.019
tr|Q8S2Q8|Q8S2Q8_ORYSJ cDNA clone:001-022-B09, full insert seque... 41 0.043
tr|A2WLQ6|A2WLQ6_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.074
tr|A2WLQ7|A2WLQ7_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.13
tr|A2Y1C9|A2Y1C9_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.16
tr|B4FV72|B4FV72_MAIZE Putative uncharacterized protein OS=Zea m... 39 0.21
tr|A9RW83|A9RW83_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.21
tr|Q4VWZ2|Q4VWZ2_ORYSJ Putative uncharacterized protein B1046G12... 38 0.28
tr|A0RGH8|A0RGH8_BACAH Putative uncharacterized protein OS=Bacil... 37 0.81
tr|B3ZIE1|B3ZIE1_BACCE Putative uncharacterized protein OS=Bacil... 37 0.81
tr|Q6L4Q2|Q6L4Q2_ORYSJ Putative uncharacterized protein P0708D12... 37 0.81
tr|Q8H942|Q8H942_ALLFI Lachrymatory factor synthase OS=Allium fi... 36 1.4
tr|Q8H941|Q8H941_ALLFI Lachrymatory factor synthase OS=Allium fi... 36 1.4

>tr|A5BHR2|A5BHR2_VITVI Putative uncharacterized protein (Chromosome
chr4 scaffold_6, whole genome shotgun sequence) OS=Vitis
vinifera GN=GSVIVT00032406001 PE=4 SV=1
Length = 163

Score = 60.5 bits (145), Expect = 5e-08
Identities = 29/73 (39%), Positives = 41/73 (56%)
Frame = -3

Query: 515 WVKEQLLEWDPRLREFSYSILDSNLGFKNYTASFSLSDPCNNGHALVTWKIELSPVHGYD 336
WVKE+LL DP FSY +LD+N+GF +Y +F + P N G L+ W PV G+
Sbjct: 78 WVKEKLLTIDPINHCFSYEVLDNNMGFNSYVTTFKVI-PINGGGCLIQWSFVCDPVQGWR 136

Query: 335 EEEFLVYMGRLLE 297
E+ Y+ L+
Sbjct: 137 YEDLASYIDSSLQ 149


>tr|A7P554|A7P554_VITVI Chromosome chr4 scaffold_6, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00032405001
PE=4 SV=1
Length = 161

Score = 57.8 bits (138), Expect = 3e-07
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Frame = -3

Query: 515 WVKEQLLEWDPRLREFSYSILDSNLGFKNYTASFSLSDPCNNGHALVTWKIELSPVHGYD 336
W KE+LL DP R FSY +LD+N+GF +Y A+ + P + G + W P+ G+
Sbjct: 71 WAKEKLLTMDPIQRCFSYEVLDNNIGFNSYVATIKVL-PVDGGGCRIEWSFASGPIEGWR 129

Query: 335 EEEF-------LVYMGRLLERNIINLERVSC 264
++ L +M + +E I N + SC
Sbjct: 130 SDDLGSFVDSCLQFMAKKMEAAIKNEDGSSC 160


>tr|A5BHR3|A5BHR3_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_034796 PE=4 SV=1
Length = 172

Score = 57.8 bits (138), Expect = 3e-07
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Frame = -3

Query: 515 WVKEQLLEWDPRLREFSYSILDSNLGFKNYTASFSLSDPCNNGHALVTWKIELSPVHGYD 336
W KE+LL DP R FSY +LD+N+GF +Y A+ + P + G + W P+ G+
Sbjct: 82 WAKEKLLTMDPIQRCFSYEVLDNNIGFNSYVATIKVL-PVDGGGCRIEWSFASGPIEGWR 140

Query: 335 EEEF-------LVYMGRLLERNIINLERVSC 264
++ L +M + +E I N + SC
Sbjct: 141 SDDLGSFVDSCLQFMAKKMEAAIKNEDGSSC 171


>tr|A9PJ81|A9PJ81_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 171

Score = 57.4 bits (137), Expect = 4e-07
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 13/96 (13%)
Frame = -3

Query: 530 DRNLVWVKEQLLEWDPRLREFSYSILDSNLGFKNYTASFSLSDPCNNGH------ALVTW 369
+ ++W KE+L+ +P R SY IL++N GFK+Y A+ +S P N+G + W
Sbjct: 76 ENKVIWAKEKLIMINPSERCLSYEILENNAGFKSYVATMKVS-PINDGDGDGHHGCTIEW 134

Query: 368 KIELSPVHGYDEEEF-------LVYMGRLLERNIIN 282
P+ G+ E+F L +MG+ +ER++++
Sbjct: 135 SFIADPIEGWPLEDFNSYINSSLQFMGKKMERDVLS 170


>tr|Q5JM62|Q5JM62_ORYSJ Putative uncharacterized protein P0042A10.2
(Putative uncharacterized protein) (Putative
uncharacterized protein P0022F10.27) OS=Oryza sativa
subsp. japonica GN=P0042A10.2 PE=4 SV=1
Length = 222

Score = 53.9 bits (128), Expect = 5e-06
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = -3

Query: 515 WVKEQLLEWDPRLREFSYSILDSNLGFKNYTASFSLS-DPCNNGHALVTWKIELSPVHGY 339
W KE+L+E+DP R +SY ++++N GF Y A+ + DP V W E PV G+
Sbjct: 138 WSKERLVEFDPVARRYSYEVVETNKGFGRYAATLRVEPDPAG---CAVAWSFEADPVRGW 194

Query: 338 DEEEFLVYMGRL 303
E F+ ++ L
Sbjct: 195 SLEGFVGFLDEL 206


>tr|A7PEI3|A7PEI3_VITVI Chromosome chr11 scaffold_13, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00016676001
PE=4 SV=1
Length = 209

Score = 52.0 bits (123), Expect = 2e-05
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 6/145 (4%)
Frame = -3

Query: 515 WVKEQLLEWDPRLREFSYSILDSNLGFKNYTASFSLSDPCNNGHALVTWKIELSPVHGYD 336
W K++LL DP FSYSI+D N+GF +Y ++ + P G + W+ E+ PV G+
Sbjct: 84 WTKQKLLSIDPDELTFSYSIIDGNVGFNSYVSTVKVL-PTEEG-CSIEWRYEVEPVEGWT 141

Query: 335 EEEFLVYMGRLLERNIINLERVSCSLSSHESK*TEKYSIA------VFGCVFCMCFVHAS 174
+ ++G L+ + +R+ +L + ++ K+S++ +F C + +H
Sbjct: 142 LGDLDSFIGSGLQ---VMAKRMEAALKAGMNR-ISKFSLSFSPTRDIFSCFYSYTSLH-- 195

Query: 173 PCLHSLLRSPPCARARMCECVC*SG 99
L+ P C C C SG
Sbjct: 196 -----LILFP-------CYCRCSSG 208


>tr|A2WUM6|A2WUM6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_03580 PE=4 SV=1
Length = 164

Score = 50.4 bits (119), Expect = 5e-05
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = -3

Query: 515 WVKEQLLEWDPRLREFSYSILDSNLGFKNYTASFSLS-DPCNNGHALVTWKIELSPVHGY 339
W KE+L+E+DP R +SY ++++N GF Y A+ + DP V W E V G+
Sbjct: 80 WSKERLVEFDPVARRYSYEVVETNKGFGRYAATLRVEPDPAG---CAVAWSFEADQVRGW 136

Query: 338 DEEEFLVYMGRL 303
E F+ ++ L
Sbjct: 137 TLEGFVGFLDEL 148


>tr|B6UBY7|B6UBY7_MAIZE Lachrymatory-factor synthase OS=Zea mays
PE=2 SV=1
Length = 177

Score = 49.7 bits (117), Expect = 9e-05
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = -3

Query: 515 WVKEQLLEWDPRLREFSYSILDSNLGFKNYTASFSLS-DPCNNGHALVTWKIELSPVHGY 339
W KE+LLE D R +SY +L+SN GF Y A+ + DP V W E PV G+
Sbjct: 93 WSKERLLEMDHAGRWYSYELLESNKGFGRYRATVRVEHDPAG---CAVRWSFEADPVKGW 149

Query: 338 DEEEFLVYMGRL 303
+ FL ++ +L
Sbjct: 150 TLDGFLGFLEKL 161


>tr|B6TW34|B6TW34_MAIZE Lachrymatory factor synthase OS=Zea mays
PE=2 SV=1
Length = 187

Score = 48.5 bits (114), Expect = 2e-04
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = -3

Query: 515 WVKEQLLEWDPRLREFSYSILDSNLGFKNYTASFS-LSDPCNNGHALVTWKIELSPVHGY 339
W +E+LLE D R Y+++ S++GF +Y A+ S ++ + G LV W E PV G+
Sbjct: 83 WAREKLLEIDDGARRLGYAVVGSSMGFGSYVATMSVVAGDADEGCRLV-WAFECQPVQGW 141

Query: 338 DEEEFLVYM 312
+ L Y+
Sbjct: 142 SRDGLLAYL 150


>tr|Q9M073|Q9M073_ARATH Putative uncharacterized protein AT4g32870
(At4g32870) OS=Arabidopsis thaliana GN=At4g32870 PE=2
SV=1
Length = 157

Score = 46.6 bits (109), Expect = 8e-04
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = -3

Query: 515 WVKEQLLEWDPRLREFSYSILDSNLGFKNYTASFSLSDPCNNGH-ALVTWKIELSPVHGY 339
W KE+L++ DP R SY IL++N+GF++Y A+ ++ + + W PV G+
Sbjct: 74 WAKEKLVKIDPIGRCLSYEILENNVGFRSYVATVQVTPVDGEDQVSRIEWSFVADPVDGW 133

Query: 338 DEEEFLVYMGRLLERNIINLE 276
+E+ Y+ L+ +E
Sbjct: 134 KKEDLESYVDFCLQHMANKME 154