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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919331
Clone id YMU001_000123_H02
Library
Length 507
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000123_H02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GACATCTCACATCATCTGCTGATGTGCGGCCACCATACATCATTGCCAACCACTCACAAT
TTTCCTCGAAGCTAGGCTGCCTTGCAGTATCCATTAACCAATACGTCACCAAATCGCTAG
AACAATCTTGTAGCTAGGGGGTCAATCTGTCTAGACCCTTCTGAAGAACTTTCATTACAA
GATCCTCGACCTTCCCGGCCTCTAAATGATTCTCTTCACCGATATTCCCTGCAATATCCC
AACCCACCTGCAACTTCGAAATAATACTCTCCAGATCTCCATCATTCAACCACTCTCTTC
CTTGTTCTCAGAGCTCGACTCCCCTCACCTTCACAAACAGAGGATAGAAATGTTCCCCAA
TAAAACAGGAACGTGCAAGCCTGGTGAGTAGATGTTGGGGAGGTAGCATATGAGAGCTCA
AACAACTGTAAGAGATGAACGCCTCCACTACATCGTCCTCGTTCATGCTGGGAACATGCA
CTATGTCTAAAGCATGGCTATTTGGAA
■■Homology search results ■■ -
sp_hit_id O74346
Definition sp|O74346|MAP4_SCHPO P cell-type agglutination protein map4 OS=Schizosaccharomyces pombe
Align length 53
Score (bit) 32.3
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919331|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_H02.
         (507 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O74346|MAP4_SCHPO P cell-type agglutination protein map4 OS=S...    32   1.3  
sp|P42433|NASB_BACSU Assimilatory nitrate reductase electron tra...    32   2.2  
sp|Q9C103|EME1_SCHPO Crossover junction endonuclease eme1 OS=Sch...    32   2.2  
sp|Q992J0|RDRP_BOOLV RNA-directed RNA polymerase OS=Boolarra vir...    31   2.9  
sp|P73423|CBID_SYNY3 Putative cobalt-precorrin-6A synthase [deac...    30   4.9  
sp|P22570|ADRO_HUMAN NADPH:adrenodoxin oxidoreductase, mitochond...    30   8.6  

>sp|O74346|MAP4_SCHPO P cell-type agglutination protein map4
           OS=Schizosaccharomyces pombe GN=map4 PE=2 SV=1
          Length = 948

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +3

Query: 183 SSTFPASK*FSSPIFPAISQPT-CNFEIILSRSPSFNHSLPCSQSSTPLTFTN 338
           S+T P S    +   P++S  T  +F II + + S+ HS P   SS PLT  N
Sbjct: 417 STTLPTSSKMITTTTPSVSNNTQSSFLIISTFTSSYEHSEPFKVSSVPLTSNN 469


>sp|P42433|NASB_BACSU Assimilatory nitrate reductase electron
           transfer subunit OS=Bacillus subtilis GN=nasB PE=2 SV=1
          Length = 770

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -3

Query: 79  QPSFEENCEWLAMMYGGRTSADDVR 5
           +P+ EE C  +  MYGGRT+A+ +R
Sbjct: 536 EPATEETCILIPQMYGGRTNAEQLR 560


>sp|Q9C103|EME1_SCHPO Crossover junction endonuclease eme1
           OS=Schizosaccharomyces pombe GN=eme1 PE=1 SV=1
          Length = 738

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
 Frame = +3

Query: 156 PF*RTFITRSSTF----PASK*FSSPIFPAISQPTCNFEIILSRSPSFNHSLPCSQSSTP 323
           PF ++ +T++ +F     +S     P  P+I+ PT N    LS +PS  +  P   SS  
Sbjct: 216 PFTQSPLTKTKSFNDALTSSSSILKPCMPSIASPTSNR---LSHAPSTPNLFPNQDSSNT 272

Query: 324 LTFTNRG*KCSPIKQER 374
           +   N   K S   QER
Sbjct: 273 IDLINNRSKTSVENQER 289


>sp|Q992J0|RDRP_BOOLV RNA-directed RNA polymerase OS=Boolarra virus
           PE=3 SV=1
          Length = 998

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3

Query: 133 LQDCSSDLVTYWLMDTARQPSFEENCEWLAMMYGGRTSADDVR 5
           + D + D V  +L   A  P   E C  +  +YG +TS  DVR
Sbjct: 764 IADAACDRVEGYLCTDAHTPLISEYCRMVQRLYGPKTSTRDVR 806


>sp|P73423|CBID_SYNY3 Putative cobalt-precorrin-6A synthase
           [deacetylating] OS=Synechocystis sp. (strain PCC 6803)
           GN=cbiD PE=3 SV=2
          Length = 378

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = -3

Query: 235 IAGNIGE-ENHLEAGKVEDLVMKVLQKGLDRLTP*LQDCSSDLVTYWLMDTARQPSFEEN 59
           +AG I    +HL  G++E L  + +Q GL    P +Q+      T   +   R    E+N
Sbjct: 256 LAGGIFHTHHHLADGRLEILTAQAVQAGLPY--PLVQELGQAPTTEAGLKLLRHWQTEQN 313

Query: 58  CEWLAMMYGGRTSADDVR 5
           C W++ +Y       D R
Sbjct: 314 CPWVSKIYQAMADTVDRR 331


>sp|P22570|ADRO_HUMAN NADPH:adrenodoxin oxidoreductase,
           mitochondrial OS=Homo sapiens GN=FDXR PE=1 SV=3
          Length = 491

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
 Frame = +1

Query: 151 LDPSEELSLQD-----PRPSRPLNDSLHRYSLQYPNPPATSK*YSPDLHHSTTLFLVLRA 315
           LDP + L LQD     PRP + L + L R + + P P   ++  S         F   + 
Sbjct: 254 LDPVDFLGLQDKIKEVPRPRKRLTELLLRTATEKPGPAEAARQASASRAWGLRFFRSPQQ 313

Query: 316 RLPSP 330
            LPSP
Sbjct: 314 VLPSP 318
tr_hit_id Q5KLY8
Definition tr|Q5KLY8|Q5KLY8_CRYNE Expressed protein OS=Cryptococcus neoformans
Align length 127
Score (bit) 39.3
E-value 0.11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919331|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_H02.
         (507 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5KLY8|Q5KLY8_CRYNE Expressed protein OS=Cryptococcus neoform...    39   0.11 
tr|Q55Y02|Q55Y02_CRYNE Putative uncharacterized protein OS=Crypt...    39   0.11 
tr|A9V3I7|A9V3I7_MONBE Predicted protein OS=Monosiga brevicollis...    34   3.5  
tr|A9JTP9|A9JTP9_XENTR LOC100127817 protein OS=Xenopus tropicali...    34   4.7  
tr|B5UXF4|B5UXF4_BACCE Thymidylate synthase OS=Bacillus cereus A...    33   6.0  
tr|Q86AE8|Q86AE8_DICDI Similar to Cryptosporidium parvum. Type I...    33   7.8  
tr|B0G0Z9|B0G0Z9_DICDI Putative polyketide synthase OS=Dictyoste...    33   7.8  

>tr|Q5KLY8|Q5KLY8_CRYNE Expressed protein OS=Cryptococcus neoformans
           GN=CNB03580 PE=4 SV=1
          Length = 309

 Score = 39.3 bits (90), Expect = 0.11
 Identities = 38/127 (29%), Positives = 54/127 (42%), Gaps = 19/127 (14%)
 Frame = +1

Query: 175 LQDPRPSRPLNDSLHRYSLQYPNPPATSK*YSPDLHHSTTLFLVLRARLPSPSQ--TEDR 348
           ++ P P RP   SLH +   +  PP  ++  SP LHHS++ FL        PS   TE  
Sbjct: 28  MRPPAPPRPEPPSLHSWLHPHAPPPTLAR--SPPLHHSSSTFLTFAVSFLPPSHVTTEAA 85

Query: 349 NVPQ*NRNVQAW*V---------DVGEVAYESSN--------NCKR*TPPLHRPRSCWEH 477
              +  R V+   V           GE A+++ +          +R   P HR  +C   
Sbjct: 86  LAKEAKRIVRELDVVRRAGPELMAAGEGAFQAGDGRAPGRAPGNERAREPDHRMWAC--R 143

Query: 478 ALCLKHG 498
           ALCLK G
Sbjct: 144 ALCLKEG 150


>tr|Q55Y02|Q55Y02_CRYNE Putative uncharacterized protein
           OS=Cryptococcus neoformans GN=CNBB2120 PE=4 SV=1
          Length = 255

 Score = 39.3 bits (90), Expect = 0.11
 Identities = 38/127 (29%), Positives = 54/127 (42%), Gaps = 19/127 (14%)
 Frame = +1

Query: 175 LQDPRPSRPLNDSLHRYSLQYPNPPATSK*YSPDLHHSTTLFLVLRARLPSPSQ--TEDR 348
           ++ P P RP   SLH +   +  PP  ++  SP LHHS++ FL        PS   TE  
Sbjct: 1   MRPPAPPRPEPPSLHSWLHPHAPPPTLAR--SPPLHHSSSTFLTFAVSFLPPSHVTTEAA 58

Query: 349 NVPQ*NRNVQAW*V---------DVGEVAYESSN--------NCKR*TPPLHRPRSCWEH 477
              +  R V+   V           GE A+++ +          +R   P HR  +C   
Sbjct: 59  LAKEAKRIVRELDVVRRAGPELMAAGEGAFQAGDGRAPGRAPGNERAREPDHRMWAC--R 116

Query: 478 ALCLKHG 498
           ALCLK G
Sbjct: 117 ALCLKEG 123


>tr|A9V3I7|A9V3I7_MONBE Predicted protein OS=Monosiga brevicollis
           GN=9704 PE=4 SV=1
          Length = 376

 Score = 34.3 bits (77), Expect = 3.5
 Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
 Frame = -3

Query: 400 PQHLLT---RLARSCFIGEHFYPLFVKVRGVEL*EQGREWLNDGDLESIISKLQVGWDIA 230
           P HL+    R  +S F    ++ +FVK  G  L  Q  EW+NDG ++ +I K +  W   
Sbjct: 271 PSHLVALSFRKFKSLFANYKYHTVFVKPNGDAL-RQITEWINDGRIKPLIDK-EFSWKEV 328

Query: 229 GNIGEENHLEAGKVEDLVMKVLQKGLDRLTP*LQDCSSDLVTYWLMDTARQPSFEEN 59
                 ++L  G V     K++   +D     ++D  + L +Y L D   Q S  +N
Sbjct: 329 DQ--AHDYLAKGHVHG---KLIINHVDD----VEDTLNGLQSYSLADRELQDSGNQN 376


>tr|A9JTP9|A9JTP9_XENTR LOC100127817 protein OS=Xenopus tropicalis
           GN=LOC100127817 PE=2 SV=1
          Length = 346

 Score = 33.9 bits (76), Expect = 4.7
 Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
 Frame = +1

Query: 16  LLMCGHHTSLPTTHNFPRS*AALQYPLTNTSPNR*NNLVARGSICLDPSEELSLQDPRPS 195
           +L C  +TS P TH   +S  A Q P + + P+  N+      I   P   LSL  P  S
Sbjct: 215 VLWCYSNTSKPHTH---KSLHASQKPTSLSLPH--NSTPTSPFI---PGGFLSLSTPPIS 266

Query: 196 RPLNDSLHRYSLQ-YPNPPATSK*YSPDLHHSTTLFLVL 309
            PL D +HRY +  +   P  +K  S  LH  T    VL
Sbjct: 267 VPLGDGMHRYDIDLFGTDPVAAK--SHILHQVTEALRVL 303


>tr|B5UXF4|B5UXF4_BACCE Thymidylate synthase OS=Bacillus cereus
           AH1134 GN=thyA_2 PE=4 SV=1
          Length = 326

 Score = 33.5 bits (75), Expect = 6.0
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +2

Query: 221 DIPCNIPTHLQLRNNTLQISIIQPLSSLF 307
           DIPCNI   L++RNN L +++I   + LF
Sbjct: 149 DIPCNISIMLKIRNNLLDMTVINRSNDLF 177


>tr|Q86AE8|Q86AE8_DICDI Similar to Cryptosporidium parvum. Type I
            fatty acid synthase OS=Dictyostelium discoideum PE=4 SV=1
          Length = 2700

 Score = 33.1 bits (74), Expect = 7.8
 Identities = 18/48 (37%), Positives = 28/48 (58%)
 Frame = +2

Query: 221  DIPCNIPTHLQLRNNTLQISIIQPLSSLFSELDSPHLHKQRIEMFPNK 364
            +I  N+ T  QL+NNT+ ISI   L+SL     + +L   RI+ + N+
Sbjct: 2257 EIGINLITIQQLQNNTINISIKMILNSLMKNNQNKYLPSNRIDYWKNE 2304


>tr|B0G0Z9|B0G0Z9_DICDI Putative polyketide synthase OS=Dictyostelium
            discoideum GN=pks6 PE=4 SV=1
          Length = 2924

 Score = 33.1 bits (74), Expect = 7.8
 Identities = 18/48 (37%), Positives = 28/48 (58%)
 Frame = +2

Query: 221  DIPCNIPTHLQLRNNTLQISIIQPLSSLFSELDSPHLHKQRIEMFPNK 364
            +I  N+ T  QL+NNT+ ISI   L+SL     + +L   RI+ + N+
Sbjct: 2481 EIGINLITIQQLQNNTINISIKMILNSLMKNNQNKYLPSNRIDYWKNE 2528