BP919332
Clone id YMU001_000123_H03
Library
Length 549
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000123_H03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CCAAAACATTGCCTTTCCCCCCCTCTAACCCGACCTCTTGCTCTTGACCTTTCATGAATG
CTTCCTCTCTCTGGGACCTTGTTAACTTGGCGCTAGGAACAACTCCCATAAATTGCCCTT
CCTTCCCTAACCCAGAATCTTTGCACTTGCGCACAACCTTCTCTTCAGTCCTTGAAGGGT
GGTTTAACACATCGCGATCTTCTTGAGCACCATCAAGGACAAAATTTTCCTTACTTGATT
TGGCTCTCTTTGACCTGTGTTCTTTATGGTCTTCTTTATGTGGAACAGTACTAGGGCTTC
GGGCATGCTTTTGGAGCACATCAGCACCATAGCAATGGCTGCTGCCACGTTGACCATTCA
AAAAGCTACCACTACTGTCACTCTGAGAGCCCTCTCCATCCTTTGACCTATGAACCTCCT
CTCTTGACTTCCCCTTGCTTGACGATTTAGAGCTCGAATGACTTCCTCTATGTCTTTCTT
TGTGCCTCCTTTTGGAGGCATCATCTCTCTTTCTTTTATGACTCCTCTTTTCTCGTCTGC
TTCTCCCAC
■■Homology search results ■■ -
sp_hit_id Q8BI67
Definition sp|Q8BI67|ZN473_MOUSE Zinc finger protein 473 homolog OS=Mus musculus
Align length 92
Score (bit) 34.3
E-value 0.41
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919332|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_H03.
(549 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8BI67|ZN473_MOUSE Zinc finger protein 473 homolog OS=Mus mus... 34 0.41
sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6... 33 0.91
sp|Q09221|TG308_CAEEL Putative protein tag-308 OS=Caenorhabditis... 32 2.6
sp|Q03DX9|RPOE_PEDPA Probable DNA-directed RNA polymerase subuni... 30 5.9
sp|Q7T2B3|CT094_DANRE UPF0492 protein C20orf94 homolog OS=Danio ... 30 5.9
sp|Q10195|YBY6_SCHPO Uncharacterized protein C11C11.06c OS=Schiz... 30 7.7
sp|Q7V9F9|RS6_PROMA 30S ribosomal protein S6 OS=Prochlorococcus ... 30 7.7
sp|P20075|LEAD8_DAUCA Embryonic protein DC-8 OS=Daucus carota PE... 30 7.7
sp|Q6P9P0|F178A_MOUSE Protein FAM178A OS=Mus musculus GN=Fam178a... 30 7.7

>sp|Q8BI67|ZN473_MOUSE Zinc finger protein 473 homolog OS=Mus
musculus GN=Znf473 PE=2 SV=1
Length = 892

Score = 34.3 bits (77), Expect = 0.41
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 5/92 (5%)
Frame = -3

Query: 364 FLNGQRGSSHCYGADVLQKHARSPSTVPH-----KEDHKEHRSKRAKSSKENFVLDGAQE 200
F NGQ C G D L P ++P KE +H+S +KS +E
Sbjct: 113 FSNGQLNFEACIGEDWLNSFLGDPESLPRPDISDKESPADHQSPESKSGLSPGPPLCTRE 172

Query: 199 DRDVLNHPSRTEEKVVRKCKDSGLGKEGQFMG 104
D + P +T V+ K S L +E G
Sbjct: 173 DAVMSASPEKTLTPVILKESRSDLSQEDSVQG 204


>sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6
OS=Homo sapiens GN=CHD6 PE=1 SV=3
Length = 2715

Score = 33.1 bits (74), Expect = 0.91
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Frame = -3

Query: 277 KEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNHPSRTEEKVVRKCKDSGL----GKEGQF 110
KE K K+AK KE DGA++ R E K R C DS K +
Sbjct: 128 KEPRKAEEPKKAKEHKEPKQKDGAKKARKPREASGTKEAKEKRSCTDSAARTKSRKASKE 187

Query: 109 MGVVPSAKLTRSQRE-EAFMKGQEQEVGL 26
G P K + +R+ E ++ E + GL
Sbjct: 188 QGPTPVEKKKKGKRKSETTVESLELDQGL 216


>sp|Q09221|TG308_CAEEL Putative protein tag-308 OS=Caenorhabditis
elegans GN=tag-308 PE=2 SV=3
Length = 7548

Score = 31.6 bits (70), Expect = 2.6
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = -3

Query: 298 SPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNHPSRTEEKVVRKCKD 137
S S V +E KEH SK+ SS+E + + +RD EE+VV+ KD
Sbjct: 1717 SVSGVMKRESRKEHSSKKFTSSREEIIQGFWKGERD--------EERVVKTLKD 1762


>sp|Q03DX9|RPOE_PEDPA Probable DNA-directed RNA polymerase subunit
delta OS=Pediococcus pentosaceus (strain ATCC 25745 /
183-1w) GN=rpoE PE=3 SV=1
Length = 178

Score = 30.4 bits (67), Expect = 5.9
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -3

Query: 280 HKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNHPSRTEEKVVRKCKDS 134
H ED E R R K K N L A +D DV+++ S E + +D+
Sbjct: 93 HAEDEDEDRPVRKKRKKVNAFLADAADDDDVIDYDSDDPEDEEVEAEDT 141


>sp|Q7T2B3|CT094_DANRE UPF0492 protein C20orf94 homolog OS=Danio
rerio GN=zgc:64090 PE=2 SV=1
Length = 499

Score = 30.4 bits (67), Expect = 5.9
Identities = 33/122 (27%), Positives = 47/122 (38%), Gaps = 16/122 (13%)
Frame = -3

Query: 319 VLQKHARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQE-DRDVLNHPSRTEEKVVRKC 143
VLQK AR P + + +S F D A++ R VL +R ++C
Sbjct: 166 VLQKIARKTKIQPPRSQDNQ------ESKTGQFQADNAEKGSRSVLQRITRQANIQPQQC 219

Query: 142 KDSGLGKEGQFMGVVPS-------AKLTRS--------QREEAFMKGQEQEVGLEGGKGN 8
+D + K GQF K+TR Q ++ GQ Q E G G+
Sbjct: 220 QDDQVYKSGQFQADKQEKGSGDVLQKITRQANIQPQQCQDDQESKSGQVQADKEENGSGD 279

Query: 7 VL 2
VL
Sbjct: 280 VL 281


>sp|Q10195|YBY6_SCHPO Uncharacterized protein C11C11.06c
OS=Schizosaccharomyces pombe GN=SPBC11C11.06c PE=2 SV=1
Length = 178

Score = 30.0 bits (66), Expect = 7.7
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Frame = -3

Query: 361 LNGQRGSSHCYGADVLQKHA----RSPSTVPHKEDHKEHRSKRAKSSKEN-FVLDGAQED 197
++ + GSSH A+++++HA + P + +E S+ E VLD +ED
Sbjct: 1 MSAKEGSSHPSYAEIVREHAPEQTAAEKAAPQPPEVEEVLSEEPYQKNEKVVVLD--EED 58

Query: 196 RDVLNHPSRTEEKVVRKCKDSGLGKEGQFMG 104
D HP E K K+S +G+ G
Sbjct: 59 ADAFLHPEEAEAK-----KESEKPSDGEKKG 84


>sp|Q7V9F9|RS6_PROMA 30S ribosomal protein S6 OS=Prochlorococcus
marinus GN=rpsF PE=3 SV=1
Length = 210

Score = 30.0 bits (66), Expect = 7.7
Identities = 25/83 (30%), Positives = 37/83 (44%)
Frame = -3

Query: 310 KHARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNHPSRTEEKVVRKCKDSG 131
K A+ V +D KE K AK +KE +E +D + K V++ KD+
Sbjct: 135 KEAKDTKEVKEAKDTKE--VKEAKDTKE------VKEAKDTKEVKEAKDTKEVKEAKDTK 186

Query: 130 LGKEGQFMGVVPSAKLTRSQREE 62
KE + V AK T+ +EE
Sbjct: 187 EVKEAKDTKEVKEAKDTKEVKEE 209


>sp|P20075|LEAD8_DAUCA Embryonic protein DC-8 OS=Daucus carota PE=3
SV=1
Length = 555

Score = 30.0 bits (66), Expect = 7.7
Identities = 16/75 (21%), Positives = 33/75 (44%)
Frame = -3

Query: 265 KEHRSKRAKSSKENFVLDGAQEDRDVLNHPSRTEEKVVRKCKDSGLGKEGQFMGVVPSAK 86
K H + ++ D +E DV + ++ + KD+ +GK G++ +A+
Sbjct: 74 KAHDTAEVSRENTDYAYDKGREGGDVAAQKAEEAKEKAKMAKDTTMGKAGEYKDY--TAQ 131

Query: 85 LTRSQREEAFMKGQE 41
+E+A K +E
Sbjct: 132 KAEEAKEKAAQKAEE 146


>sp|Q6P9P0|F178A_MOUSE Protein FAM178A OS=Mus musculus GN=Fam178a
PE=2 SV=2
Length = 1278

Score = 30.0 bits (66), Expect = 7.7
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 10/112 (8%)
Frame = -3

Query: 343 SSHCYGADVLQKHARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNHPSRTE 164
SS G+ + H R ST P + K S +F A++D+ +L+ P ++
Sbjct: 14 SSPAPGSSPPRCHLRPGSTAPAAAGKRTESPGDRKQSIIDFFKPAAKQDKHMLDSPQKSN 73

Query: 163 EKVVRKCKDSGLGKEG--QFMGVVPSAKLTRSQRE--------EAFMKGQEQ 38
K + +GL G QF + S K + +R EAFMKG ++
Sbjct: 74 IKY----RGNGLSITGTEQFERKLSSPKKLKPKRMSSEESPILEAFMKGGKE 121


tr_hit_id A9TVF4
Definition tr|A9TVF4|A9TVF4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 97
Score (bit) 37.7
E-value 0.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919332|Adiantum capillus-veneris mRNA, clone:
YMU001_000123_H03.
(549 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TVF4|A9TVF4_PHYPA Predicted protein OS=Physcomitrella paten... 38 0.40
tr|B6PLH6|B6PLH6_BRAFL Putative uncharacterized protein OS=Branc... 37 0.68
tr|B6NXK9|B6NXK9_BRAFL Putative uncharacterized protein (Fragmen... 37 0.68
tr|B6LAN1|B6LAN1_BRAFL Putative uncharacterized protein OS=Branc... 37 0.68
tr|B0WBW3|B0WBW3_CULQU Putative uncharacterized protein OS=Culex... 37 0.89
tr|Q699W7|Q699W7_SIVCZ Pol protein (Fragment) OS=Simian immunode... 36 1.2
tr|Q4SLK8|Q4SLK8_TETNG Chromosome 15 SCAF14556, whole genome sho... 35 2.0
tr|B6NXJ4|B6NXJ4_BRAFL Putative uncharacterized protein OS=Branc... 35 2.0
tr|A7E302|A7E302_BOVIN C26H10ORF6 protein OS=Bos taurus GN=C26H1... 35 2.6
tr|B3NV36|B3NV36_DROER GG18754 OS=Drosophila erecta GN=GG18754 P... 35 3.4
tr|Q69ZQ9|Q69ZQ9_MOUSE MKIAA1141 protein (Fragment) OS=Mus muscu... 34 4.4
tr|Q4VA40|Q4VA40_MOUSE Zfp473 protein OS=Mus musculus GN=Zfp473 ... 34 4.4
tr|A5K1X7|A5K1X7_PLAVI Putative uncharacterized protein OS=Plasm... 34 4.4
tr|B4DR09|B4DR09_HUMAN cDNA FLJ56827, highly similar to Solute c... 34 4.4
tr|A4QPC2|A4QPC2_HUMAN SLCO5A1 protein OS=Homo sapiens GN=SLCO5A... 34 4.4
tr|A0D4E6|A0D4E6_PARTE Chromosome undetermined scaffold_37, whol... 33 7.5
tr|B4R4T0|B4R4T0_DROSI GD16724 OS=Drosophila simulans GN=GD16724... 33 9.8

>tr|A9TVF4|A9TVF4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_172177 PE=4 SV=1
Length = 1024

Score = 37.7 bits (86), Expect = 0.40
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Frame = -3

Query: 304 ARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNH-PSRTEEKVV-RKCKDSG 131
A+ +T P+KE KEH S+R K S + L + + +H +R E++ V K +DS
Sbjct: 686 AKKTTTEPYKEHSKEHMSQRRKESHRH--LSSQKPSNRLESHLDARIEDRSVGSKDRDSQ 743

Query: 130 LGKEGQFM-----GVVPSAKLTRSQREEAFMKGQEQE 35
++ + GV P A+ ++E+ +K +EQE
Sbjct: 744 ENRDASSIDNSKSGVKPRAEEEEEEQEQEELKDEEQE 780


>tr|B6PLH6|B6PLH6_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_108391 PE=4 SV=1
Length = 1131

Score = 37.0 bits (84), Expect = 0.68
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Frame = -3

Query: 322 DVLQKHARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNH-PSRTEEKVVRK 146
D+ K AR S HK+ S+R K+S ++F D + D DV N P++T ++ V
Sbjct: 864 DIEAKKARHTSRTSQSH-HKD--SQREKASFDSFEQDANENDVDVNNEIPTQTSKRAVTT 920

Query: 145 CKDSGLGKEGQFMGVVPSAKLTRSQREEAFMKGQEQEVGLEGGK 14
K G GK+ + + S +++ + QEVG +G K
Sbjct: 921 KKGGGRGKKSKVVLERDSKDKKAAKKSSKTVSRPSQEVG-QGNK 963


>tr|B6NXK9|B6NXK9_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_269557 PE=4 SV=1
Length = 365

Score = 37.0 bits (84), Expect = 0.68
Identities = 27/95 (28%), Positives = 45/95 (47%)
Frame = -3

Query: 322 DVLQKHARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNHPSRTEEKVVRKC 143
D+ +K A K++ +E K+A+ S+ +F +DG ++D D + EE+V
Sbjct: 119 DLAKKRAEVLERKEEKKERRERARKQAQLSQLSFAVDGEEDDEDDDDDEEEEEEEVQPVF 178

Query: 142 KDSGLGKEGQFMGVVPSAKLTRSQREEAFMKGQEQ 38
K LGK V ++ L REE K +E+
Sbjct: 179 KKKKLGKNPD----VDTSFLPDRDREEEENKLREE 209


>tr|B6LAN1|B6LAN1_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_68220 PE=4 SV=1
Length = 1129

Score = 37.0 bits (84), Expect = 0.68
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Frame = -3

Query: 322 DVLQKHARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNH-PSRTEEKVVRK 146
D+ K AR S HK+ S+R K+S ++F D + D DV N P++T ++ V
Sbjct: 825 DIEAKKARHTSRTSQSH-HKD--SQREKASFDSFEQDANENDVDVNNEIPTQTSKRAVTT 881

Query: 145 CKDSGLGKEGQFMGVVPSAKLTRSQREEAFMKGQEQEVGLEGGK 14
K G GK+ + + S +++ + QEVG +G K
Sbjct: 882 KKGGGRGKKSKVVLERDSKDKKAAKKSRKTVSRPSQEVG-QGNK 924


>tr|B0WBW3|B0WBW3_CULQU Putative uncharacterized protein OS=Culex
quinquefasciatus GN=CpipJ_CPIJ004662 PE=4 SV=1
Length = 1149

Score = 36.6 bits (83), Expect = 0.89
Identities = 18/75 (24%), Positives = 42/75 (56%)
Frame = -3

Query: 286 VPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNHPSRTEEKVVRKCKDSGLGKEGQFM 107
VP KE+ + + K K +K++ V++GA+E+ D + +++ V K ++ L ++ + +
Sbjct: 422 VPTKEEESDTKKKNQKKTKKDTVVEGAEEECDQGESVVKAKKRRVEKVEEEPLEQQQETV 481

Query: 106 GVVPSAKLTRSQREE 62
+ + + R + EE
Sbjct: 482 KNIVTVEKEREKEEE 496


>tr|Q699W7|Q699W7_SIVCZ Pol protein (Fragment) OS=Simian
immunodeficiency virus (isolate CPZ GAB1) PE=4 SV=1
Length = 1007

Score = 36.2 bits (82), Expect = 1.2
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = -3

Query: 235 SKENFVLDGAQEDRDVLNHPSRTEEKVVRKCKDSGLGKEGQFMGVVPSAK 86
SK N V D +L HPS TE K+V K + GKE ++ VP+ K
Sbjct: 651 SKMNIVTDSQYALGIILEHPSETEHKIVEKVIQALQGKEQIYLAWVPAHK 700


>tr|Q4SLK8|Q4SLK8_TETNG Chromosome 15 SCAF14556, whole genome
shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
GN=GSTENG00016196001 PE=4 SV=1
Length = 444

Score = 35.4 bits (80), Expect = 2.0
Identities = 31/118 (26%), Positives = 55/118 (46%)
Frame = -3

Query: 358 NGQRGSSHCYGADVLQKHARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNH 179
N +R S +KH+RSPS HK++ K+ + K + D ++E+R+
Sbjct: 284 NRRRRRSQSISRSPKRKHSRSPSPRRHKKEKKKDKEKERDRKTDK---DYSREERE---- 336

Query: 178 PSRTEEKVVRKCKDSGLGKEGQFMGVVPSAKLTRSQREEAFMKGQEQEVGLEGGKGNV 5
PS +++K K KD KE + + +RE + +E+E +G KG++
Sbjct: 337 PSSSKKK---KNKDKDKEKEKE------KDREKEREREREREREREREKKPDGEKGDI 385


>tr|B6NXJ4|B6NXJ4_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_100301 PE=4 SV=1
Length = 1436

Score = 35.4 bits (80), Expect = 2.0
Identities = 26/95 (27%), Positives = 45/95 (47%)
Frame = -3

Query: 322 DVLQKHARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNHPSRTEEKVVRKC 143
D+ +K A K++ +E K+A+ S+ +F +DG +++ D + EE+V
Sbjct: 91 DLAKKRAEVLERKEEKKERRERARKQAQLSQLSFAVDGEEDEEDDDDDEEEEEEEVQPVF 150

Query: 142 KDSGLGKEGQFMGVVPSAKLTRSQREEAFMKGQEQ 38
K LGK V ++ L REE K +E+
Sbjct: 151 KKKKLGKNPD----VDTSFLPDRDREEEENKLREE 181


>tr|A7E302|A7E302_BOVIN C26H10ORF6 protein OS=Bos taurus
GN=C26H10ORF6 PE=2 SV=1
Length = 1054

Score = 35.0 bits (79), Expect = 2.6
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 10/112 (8%)
Frame = -3

Query: 343 SSHCYGADVLQKHARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNHPSRTE 164
SS G+ + H R STVP K R K S +F +++DR +L+ P ++
Sbjct: 14 SSPAPGSSPPRCHLRPGSTVPAAAGKKTERPGDRKQSIIDFFKPASKQDRRMLDSPQKSN 73

Query: 163 EKVVRKCKDSGLGKEG--QFMGVVPSAKLTRSQRE--------EAFMKGQEQ 38
K +SGL G QF + S K ++ +R EAF+KG ++
Sbjct: 74 IKY----GESGLSISGTEQFERKLSSPKSSKPKRVPSEKSPVLEAFIKGVKE 121


>tr|B3NV36|B3NV36_DROER GG18754 OS=Drosophila erecta GN=GG18754 PE=4
SV=1
Length = 626

Score = 34.7 bits (78), Expect = 3.4
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3

Query: 316 LQKHARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDR-DVLNHPSRTEEKVVRKCK 140
L KH + E KE S++ KSS+++ ++ED+ H S + EK K +
Sbjct: 295 LSKHLEADKDRRRLEQEKERESRKKKSSRQSLDKSSSKEDKPPAKEHKSSSREKSTPK-E 353

Query: 139 DSGLGKE 119
D LGKE
Sbjct: 354 DKHLGKE 360