BP919332 |
Clone id |
YMU001_000123_H03 |
Library |
YMU01 |
Length |
549 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000123_H03. |
Accession |
BP919332 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1725Contig1 |
Sequence |
CCAAAACATTGCCTTTCCCCCCCTCTAACCCGACCTCTTGCTCTTGACCTTTCATGAATG CTTCCTCTCTCTGGGACCTTGTTAACTTGGCGCTAGGAACAACTCCCATAAATTGCCCTT CCTTCCCTAACCCAGAATCTTTGCACTTGCGCACAACCTTCTCTTCAGTCCTTGAAGGGT GGTTTAACACATCGCGATCTTCTTGAGCACCATCAAGGACAAAATTTTCCTTACTTGATT TGGCTCTCTTTGACCTGTGTTCTTTATGGTCTTCTTTATGTGGAACAGTACTAGGGCTTC GGGCATGCTTTTGGAGCACATCAGCACCATAGCAATGGCTGCTGCCACGTTGACCATTCA AAAAGCTACCACTACTGTCACTCTGAGAGCCCTCTCCATCCTTTGACCTATGAACCTCCT CTCTTGACTTCCCCTTGCTTGACGATTTAGAGCTCGAATGACTTCCTCTATGTCTTTCTT TGTGCCTCCTTTTGGAGGCATCATCTCTCTTTCTTTTATGACTCCTCTTTTCTCGTCTGC TTCTCCCAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8BI67 |
Definition |
sp|Q8BI67|ZN473_MOUSE Zinc finger protein 473 homolog OS=Mus musculus |
Align length |
92 |
Score (bit) |
34.3 |
E-value |
0.41 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TVF4 |
Definition |
tr|A9TVF4|A9TVF4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
97 |
Score (bit) |
37.7 |
E-value |
0.4 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919332|Adiantum capillus-veneris mRNA, clone: YMU001_000123_H03. (549 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TVF4|A9TVF4_PHYPA Predicted protein OS=Physcomitrella paten... 38 0.40 tr|B6PLH6|B6PLH6_BRAFL Putative uncharacterized protein OS=Branc... 37 0.68 tr|B6NXK9|B6NXK9_BRAFL Putative uncharacterized protein (Fragmen... 37 0.68 tr|B6LAN1|B6LAN1_BRAFL Putative uncharacterized protein OS=Branc... 37 0.68 tr|B0WBW3|B0WBW3_CULQU Putative uncharacterized protein OS=Culex... 37 0.89 tr|Q699W7|Q699W7_SIVCZ Pol protein (Fragment) OS=Simian immunode... 36 1.2 tr|Q4SLK8|Q4SLK8_TETNG Chromosome 15 SCAF14556, whole genome sho... 35 2.0 tr|B6NXJ4|B6NXJ4_BRAFL Putative uncharacterized protein OS=Branc... 35 2.0 tr|A7E302|A7E302_BOVIN C26H10ORF6 protein OS=Bos taurus GN=C26H1... 35 2.6 tr|B3NV36|B3NV36_DROER GG18754 OS=Drosophila erecta GN=GG18754 P... 35 3.4 tr|Q69ZQ9|Q69ZQ9_MOUSE MKIAA1141 protein (Fragment) OS=Mus muscu... 34 4.4 tr|Q4VA40|Q4VA40_MOUSE Zfp473 protein OS=Mus musculus GN=Zfp473 ... 34 4.4 tr|A5K1X7|A5K1X7_PLAVI Putative uncharacterized protein OS=Plasm... 34 4.4 tr|B4DR09|B4DR09_HUMAN cDNA FLJ56827, highly similar to Solute c... 34 4.4 tr|A4QPC2|A4QPC2_HUMAN SLCO5A1 protein OS=Homo sapiens GN=SLCO5A... 34 4.4 tr|A0D4E6|A0D4E6_PARTE Chromosome undetermined scaffold_37, whol... 33 7.5 tr|B4R4T0|B4R4T0_DROSI GD16724 OS=Drosophila simulans GN=GD16724... 33 9.8
>tr|A9TVF4|A9TVF4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172177 PE=4 SV=1 Length = 1024
Score = 37.7 bits (86), Expect = 0.40 Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Frame = -3
Query: 304 ARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNH-PSRTEEKVV-RKCKDSG 131 A+ +T P+KE KEH S+R K S + L + + +H +R E++ V K +DS Sbjct: 686 AKKTTTEPYKEHSKEHMSQRRKESHRH--LSSQKPSNRLESHLDARIEDRSVGSKDRDSQ 743
Query: 130 LGKEGQFM-----GVVPSAKLTRSQREEAFMKGQEQE 35 ++ + GV P A+ ++E+ +K +EQE Sbjct: 744 ENRDASSIDNSKSGVKPRAEEEEEEQEQEELKDEEQE 780
>tr|B6PLH6|B6PLH6_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_108391 PE=4 SV=1 Length = 1131
Score = 37.0 bits (84), Expect = 0.68 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 1/104 (0%) Frame = -3
Query: 322 DVLQKHARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNH-PSRTEEKVVRK 146 D+ K AR S HK+ S+R K+S ++F D + D DV N P++T ++ V Sbjct: 864 DIEAKKARHTSRTSQSH-HKD--SQREKASFDSFEQDANENDVDVNNEIPTQTSKRAVTT 920
Query: 145 CKDSGLGKEGQFMGVVPSAKLTRSQREEAFMKGQEQEVGLEGGK 14 K G GK+ + + S +++ + QEVG +G K Sbjct: 921 KKGGGRGKKSKVVLERDSKDKKAAKKSSKTVSRPSQEVG-QGNK 963
>tr|B6NXK9|B6NXK9_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae GN=BRAFLDRAFT_269557 PE=4 SV=1 Length = 365
Score = 37.0 bits (84), Expect = 0.68 Identities = 27/95 (28%), Positives = 45/95 (47%) Frame = -3
Query: 322 DVLQKHARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNHPSRTEEKVVRKC 143 D+ +K A K++ +E K+A+ S+ +F +DG ++D D + EE+V Sbjct: 119 DLAKKRAEVLERKEEKKERRERARKQAQLSQLSFAVDGEEDDEDDDDDEEEEEEEVQPVF 178
Query: 142 KDSGLGKEGQFMGVVPSAKLTRSQREEAFMKGQEQ 38 K LGK V ++ L REE K +E+ Sbjct: 179 KKKKLGKNPD----VDTSFLPDRDREEEENKLREE 209
>tr|B6LAN1|B6LAN1_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_68220 PE=4 SV=1 Length = 1129
Score = 37.0 bits (84), Expect = 0.68 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 1/104 (0%) Frame = -3
Query: 322 DVLQKHARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNH-PSRTEEKVVRK 146 D+ K AR S HK+ S+R K+S ++F D + D DV N P++T ++ V Sbjct: 825 DIEAKKARHTSRTSQSH-HKD--SQREKASFDSFEQDANENDVDVNNEIPTQTSKRAVTT 881
Query: 145 CKDSGLGKEGQFMGVVPSAKLTRSQREEAFMKGQEQEVGLEGGK 14 K G GK+ + + S +++ + QEVG +G K Sbjct: 882 KKGGGRGKKSKVVLERDSKDKKAAKKSRKTVSRPSQEVG-QGNK 924
>tr|B0WBW3|B0WBW3_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus GN=CpipJ_CPIJ004662 PE=4 SV=1 Length = 1149
Score = 36.6 bits (83), Expect = 0.89 Identities = 18/75 (24%), Positives = 42/75 (56%) Frame = -3
Query: 286 VPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNHPSRTEEKVVRKCKDSGLGKEGQFM 107 VP KE+ + + K K +K++ V++GA+E+ D + +++ V K ++ L ++ + + Sbjct: 422 VPTKEEESDTKKKNQKKTKKDTVVEGAEEECDQGESVVKAKKRRVEKVEEEPLEQQQETV 481
Query: 106 GVVPSAKLTRSQREE 62 + + + R + EE Sbjct: 482 KNIVTVEKEREKEEE 496
>tr|Q699W7|Q699W7_SIVCZ Pol protein (Fragment) OS=Simian immunodeficiency virus (isolate CPZ GAB1) PE=4 SV=1 Length = 1007
Score = 36.2 bits (82), Expect = 1.2 Identities = 20/50 (40%), Positives = 26/50 (52%) Frame = -3
Query: 235 SKENFVLDGAQEDRDVLNHPSRTEEKVVRKCKDSGLGKEGQFMGVVPSAK 86 SK N V D +L HPS TE K+V K + GKE ++ VP+ K Sbjct: 651 SKMNIVTDSQYALGIILEHPSETEHKIVEKVIQALQGKEQIYLAWVPAHK 700
>tr|Q4SLK8|Q4SLK8_TETNG Chromosome 15 SCAF14556, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00016196001 PE=4 SV=1 Length = 444
Score = 35.4 bits (80), Expect = 2.0 Identities = 31/118 (26%), Positives = 55/118 (46%) Frame = -3
Query: 358 NGQRGSSHCYGADVLQKHARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNH 179 N +R S +KH+RSPS HK++ K+ + K + D ++E+R+ Sbjct: 284 NRRRRRSQSISRSPKRKHSRSPSPRRHKKEKKKDKEKERDRKTDK---DYSREERE---- 336
Query: 178 PSRTEEKVVRKCKDSGLGKEGQFMGVVPSAKLTRSQREEAFMKGQEQEVGLEGGKGNV 5 PS +++K K KD KE + + +RE + +E+E +G KG++ Sbjct: 337 PSSSKKK---KNKDKDKEKEKE------KDREKEREREREREREREREKKPDGEKGDI 385
>tr|B6NXJ4|B6NXJ4_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_100301 PE=4 SV=1 Length = 1436
Score = 35.4 bits (80), Expect = 2.0 Identities = 26/95 (27%), Positives = 45/95 (47%) Frame = -3
Query: 322 DVLQKHARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNHPSRTEEKVVRKC 143 D+ +K A K++ +E K+A+ S+ +F +DG +++ D + EE+V Sbjct: 91 DLAKKRAEVLERKEEKKERRERARKQAQLSQLSFAVDGEEDEEDDDDDEEEEEEEVQPVF 150
Query: 142 KDSGLGKEGQFMGVVPSAKLTRSQREEAFMKGQEQ 38 K LGK V ++ L REE K +E+ Sbjct: 151 KKKKLGKNPD----VDTSFLPDRDREEEENKLREE 181
>tr|A7E302|A7E302_BOVIN C26H10ORF6 protein OS=Bos taurus GN=C26H10ORF6 PE=2 SV=1 Length = 1054
Score = 35.0 bits (79), Expect = 2.6 Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 10/112 (8%) Frame = -3
Query: 343 SSHCYGADVLQKHARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNHPSRTE 164 SS G+ + H R STVP K R K S +F +++DR +L+ P ++ Sbjct: 14 SSPAPGSSPPRCHLRPGSTVPAAAGKKTERPGDRKQSIIDFFKPASKQDRRMLDSPQKSN 73
Query: 163 EKVVRKCKDSGLGKEG--QFMGVVPSAKLTRSQRE--------EAFMKGQEQ 38 K +SGL G QF + S K ++ +R EAF+KG ++ Sbjct: 74 IKY----GESGLSISGTEQFERKLSSPKSSKPKRVPSEKSPVLEAFIKGVKE 121
>tr|B3NV36|B3NV36_DROER GG18754 OS=Drosophila erecta GN=GG18754 PE=4 SV=1 Length = 626
Score = 34.7 bits (78), Expect = 3.4 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = -3
Query: 316 LQKHARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDR-DVLNHPSRTEEKVVRKCK 140 L KH + E KE S++ KSS+++ ++ED+ H S + EK K + Sbjct: 295 LSKHLEADKDRRRLEQEKERESRKKKSSRQSLDKSSSKEDKPPAKEHKSSSREKSTPK-E 353
Query: 139 DSGLGKE 119 D LGKE Sbjct: 354 DKHLGKE 360
|