BP919335 |
Clone id |
YMU001_000123_H06 |
Library |
YMU01 |
Length |
552 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000123_H06. |
Accession |
BP919335 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3282Contig1 |
Sequence |
ATGAATTCCTCGTACAGCTCTATACACATAGGTTTCCAACGACGGTCACCAAAAGATGCC AGCAAGCTTTTCAAAGGCACCTTCTGAGCATCTCCAGCAGTCTTGCAGTTCCACTTCTCA GAAAGCTCCTCGCCTATTTTACCACCCAAAAGTTTGACCTTCTTCAAAGGAAGTGCGTTC ATCAGATCAGAAACCGCCCCTGGTAATACCAGAGTCTGCTGATCTGGCTTATTCCTAGCG GATGCTATCTTTGCCAGAAGTTTATTGGTTGCAATTCCCACTGAGCAAGTGTACCCCAAC TTAGATCTGACATCATTTCGTATCTGTTCTGCTACAATTGCTCCTGCTAATAACCTCCTA TTAACAAGATCACAGACATCAAATGACCCACTCTCAATAACCATGCCAGCTTTTCCCTCG GGATTCCCAAGAAGACGTTCCAGCTCTTGACTCCACATGCAAGCTTTTGTCATGAAAATT TCAACCTTCTTGGTTACATCCAAATAAGCTTCATCAATGCTTGCCCGCTCACAGATGTCA GCATACTCCTGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9JJN0 |
Definition |
sp|Q9JJN0|POLH_MOUSE DNA polymerase eta OS=Mus musculus |
Align length |
145 |
Score (bit) |
73.6 |
E-value |
6.0e-13 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SDY0 |
Definition |
tr|A9SDY0|A9SDY0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
176 |
Score (bit) |
106.0 |
E-value |
7.0e-22 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919335|Adiantum capillus-veneris mRNA, clone: YMU001_000123_H06. (552 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SDY0|A9SDY0_PHYPA Predicted protein OS=Physcomitrella paten... 106 7e-22 tr|A7S226|A7S226_NEMVE Predicted protein (Fragment) OS=Nematoste... 88 3e-16 tr|A8JCD8|A8JCD8_CHLRE DNA polymerase eta/iota OS=Chlamydomonas ... 84 6e-15 tr|B6K7S5|B6K7S5_SCHJP Sister chromatid cohesion protein Eso1 OS... 81 4e-14 tr|B6MEB9|B6MEB9_BRAFL Putative uncharacterized protein (Fragmen... 79 2e-13 tr|Q9C5F5|Q9C5F5_ARATH Putative DNA-damage-inducible protein P O... 77 6e-13 tr|Q8H2D5|Q8H2D5_ARATH Putative DNA polymerase eta OS=Arabidopsi... 77 6e-13 tr|O48586|O48586_ARATH Similar to DNA-damage-inducible protein P... 77 6e-13 tr|A4ZYA8|A4ZYA8_ARATH Translesion synthesis DNA polymerase eta ... 77 6e-13 tr|A4ZYA7|A4ZYA7_ARATH Translesion synthesis DNA polymerase eta ... 77 6e-13 tr|A4S4R4|A4S4R4_OSTLU Predicted protein OS=Ostreococcus lucimar... 76 1e-12 tr|B6MG48|B6MG48_BRAFL Putative uncharacterized protein (Fragmen... 76 1e-12 tr|Q8H1C5|Q8H1C5_ARATH Putative translesion synthesis polymerase... 75 2e-12 tr|A7P2M1|A7P2M1_VITVI Chromosome chr1 scaffold_5, whole genome ... 74 4e-12 tr|B2ABI5|B2ABI5_PODAN Predicted CDS Pa_1_20790 OS=Podospora ans... 73 9e-12 tr|A2CEB0|A2CEB0_DANRE Novel protein similar to vertebrate polym... 72 1e-11 tr|Q0IJ37|Q0IJ37_XENTR DNA polymerase iota OS=Xenopus tropicalis... 72 2e-11 tr|Q568P0|Q568P0_DANRE Zgc:110185 OS=Danio rerio GN=zgc:110185 P... 71 3e-11 tr|B5X367|B5X367_SALSA DNA polymerase iota OS=Salmo salar GN=POL... 71 3e-11 tr|B0W8N7|B0W8N7_CULQU DNA polymerase eta OS=Culex quinquefascia... 71 3e-11 tr|Q4R475|Q4R475_MACFA Testis cDNA clone: QtsA-11975, similar to... 70 6e-11 tr|Q4F8A7|Q4F8A7_XENTR DNA polymerase iota OS=Xenopus tropicalis... 70 7e-11 tr|Q5JLR9|Q5JLR9_ORYSJ Putative DNA polymerase (Os01g0757800 pro... 70 7e-11 tr|Q5JLR8|Q5JLR8_ORYSJ Putative DNA polymerase OS=Oryza sativa s... 70 7e-11 tr|Q3ZBE3|Q3ZBE3_BOVIN Polymerase (DNA directed), eta OS=Bos tau... 70 1e-10 tr|B7ZA36|B7ZA36_HUMAN cDNA, FLJ79050, highly similar to DNA pol... 69 1e-10 tr|B4DG64|B4DG64_HUMAN cDNA FLJ52108, highly similar to DNA poly... 69 1e-10 tr|B3KVC6|B3KVC6_HUMAN cDNA FLJ16395 fis, clone TRACH2024139, hi... 69 1e-10 tr|B3KN75|B3KN75_HUMAN cDNA FLJ13831 fis, clone THYRO1000662, hi... 69 1e-10 tr|Q3ULX6|Q3ULX6_MOUSE Putative uncharacterized protein OS=Mus m... 69 2e-10
>tr|A9SDY0|A9SDY0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_164441 PE=4 SV=1 Length = 680
Score = 106 bits (265), Expect = 7e-22 Identities = 67/176 (38%), Positives = 92/176 (52%), Gaps = 6/176 (3%) Frame = -2
Query: 551 QEYADICERASIDEAYLDVTKKVEIFMTKACMWSQELERLL------GNPEGKAGMVIES 390 + Y+ +CERASIDEAYLDV+++VE + K W EL RLL +G M+IE Sbjct: 115 RRYSKLCERASIDEAYLDVSEQVEEMLEKDMDWESELHRLLEPTGSETTSKGVPVMLIEG 174
Query: 389 GSFDVCDLVNRRLLAGAIVAEQIRNDVRSKLGYTCSVGIATNKLLAKIASARNKPDQQTL 210 GS + + +RRLLAG+I+A+++R VR++LGYT SV Sbjct: 175 GSLAIYNAYDRRLLAGSIIADRMRASVRNELGYTISV----------------------- 211
Query: 209 VLPGAVSDLMNAXXXXXXXXXXXXXXXXXXXKWNCKTAGDAQKVPLKSLLASFGDR 42 + P AV LM A KW C TAG+AQ++P +L+A FGDR Sbjct: 212 IPPRAVPGLMKALPLKKIKLLGGKLGEEMTKKWGCTTAGEAQQIPHAALVACFGDR 267
>tr|A7S226|A7S226_NEMVE Predicted protein (Fragment) OS=Nematostella vectensis GN=v1g101604 PE=4 SV=1 Length = 345
Score = 87.8 bits (216), Expect = 3e-16 Identities = 56/181 (30%), Positives = 85/181 (46%), Gaps = 13/181 (7%) Frame = -2
Query: 545 YADICERASIDEAYLDVTKKVEIFMTKACMWSQELERLLGNPEGKAGMVIESGSFDVCDL 366 Y D CERAS+DEAYLD+T + ++ M E+ + G+ + + D Sbjct: 105 YCDNCERASVDEAYLDLTNSAQKKLS--VMTVPEIAEEVWRTTAIEGLSSKGSDTTISDE 162
Query: 365 VN-------------RRLLAGAIVAEQIRNDVRSKLGYTCSVGIATNKLLAKIASARNKP 225 + R L AGA++A ++R+ V K G+TCS G+ATNK+LAK+ NKP Sbjct: 163 LQKEWLSQLEASPYLRNLAAGAVIAAEMRHAVLEKTGFTCSAGVATNKVLAKLCCGLNKP 222
Query: 224 DQQTLVLPGAVSDLMNAXXXXXXXXXXXXXXXXXXXKWNCKTAGDAQKVPLKSLLASFGD 45 D+QTL+ AV++L + N + GD + + L A FG Sbjct: 223 DKQTLLPHSAVTNLFKTMPLRKVRHLGGKLGSQLHSELNVEFMGDLLQFKINDLKAQFGS 282
Query: 44 R 42 + Sbjct: 283 K 283
>tr|A8JCD8|A8JCD8_CHLRE DNA polymerase eta/iota OS=Chlamydomonas reinhardtii GN=POLI1 PE=4 SV=1 Length = 873
Score = 83.6 bits (205), Expect = 6e-15 Identities = 48/132 (36%), Positives = 68/132 (51%), Gaps = 5/132 (3%) Frame = -2
Query: 422 PEGKAGMVIESGS-----FDVCDLVNRRLLAGAIVAEQIRNDVRSKLGYTCSVGIATNKL 258 P G ++E S DV LV G ++A+++R V +LG+TCS G++ NKL Sbjct: 140 PVSGGGCLLEKASVDEAFLDVSPLVACSPCGGGLIAQRLRRAVYEQLGFTCSAGVSVNKL 199
Query: 257 LAKIASARNKPDQQTLVLPGAVSDLMNAXXXXXXXXXXXXXXXXXXXKWNCKTAGDAQKV 78 LAK+ SARNKPD+QTLVLP V D++ + TAG A + Sbjct: 200 LAKVGSARNKPDKQTLVLPRGVQDMLTDLPLGKLRGLGGKLGAALEGQLGAATAGQAAAL 259
Query: 77 PLKSLLASFGDR 42 PL++L G+R Sbjct: 260 PLEALQRVLGER 271
>tr|B6K7S5|B6K7S5_SCHJP Sister chromatid cohesion protein Eso1 OS=Schizosaccharomyces japonicus yFS275 GN=SJAG_04791 PE=4 SV=1 Length = 884
Score = 80.9 bits (198), Expect = 4e-14 Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 20/189 (10%) Frame = -2
Query: 548 EYADICERASIDEAYLDVTKKVEIFMTK--------------------ACMWSQELERLL 429 +Y+ + ++ASIDE+++D+T +++ + + +W++EL R+ Sbjct: 136 KYSKLVKKASIDESFVDLTAEIKKKLIQDYSFLGVPPEDLSLPLPTAPTVLWTEELGRVF 195
Query: 428 GNPEGKAGMVIESGSFDVCDLVNRRLLAGAIVAEQIRNDVRSKLGYTCSVGIATNKLLAK 249 G EG G +D L GA + ++IRN++ + LGYTCS GI+ N +L+K Sbjct: 196 GEEEGLLSEAKNGGDWDEVFLHY-----GARIVKEIRNEIFNTLGYTCSAGISRNAMLSK 250
Query: 248 IASARNKPDQQTLVLPGAVSDLMNAXXXXXXXXXXXXXXXXXXXKWNCKTAGDAQKVPLK 69 I S++NKP++QT++L V + K N + D + +P+ Sbjct: 251 ILSSKNKPNKQTVLLNSMVDHYLADVRLSELRLFGGKYGEELGKKLNAEYIKDIRAIPMD 310
Query: 68 SLLASFGDR 42 L+ GDR Sbjct: 311 ELIRILGDR 319
>tr|B6MEB9|B6MEB9_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae GN=BRAFLDRAFT_134446 PE=4 SV=1 Length = 488
Score = 79.0 bits (193), Expect = 2e-13 Identities = 54/170 (31%), Positives = 82/170 (48%) Frame = -2
Query: 551 QEYADICERASIDEAYLDVTKKVEIFMTKACMWSQELERLLGNPEGKAGMVIESGSFDVC 372 Q+++ + ER DE ++DVT+ VE + A +S +L + PE ++ Sbjct: 86 QKFSPLVERLGFDENFVDVTETVEARVKSA--FSPQLNGHIF-PE-----------IEIE 131
Query: 371 DLVNRRLLAGAIVAEQIRNDVRSKLGYTCSVGIATNKLLAKIASARNKPDQQTLVLPGAV 192 D ++RL G+ +A +IR + S LG TC GIA NKLLAK+ + ++KP+QQT +LPG V Sbjct: 132 DERHKRLACGSQIAAEIREALHSDLGITCCAGIAHNKLLAKLVAGQHKPNQQTSLLPGGV 191
Query: 191 SDLMNAXXXXXXXXXXXXXXXXXXXKWNCKTAGDAQKVPLKSLLASFGDR 42 LM T + Q P +L A FG + Sbjct: 192 GKLMGTLKTARNIPGIGSRTFKRLQTLGISTVQELQDAPADTLQAEFGSQ 241
>tr|Q9C5F5|Q9C5F5_ARATH Putative DNA-damage-inducible protein P OS=Arabidopsis thaliana GN=At5g44740 PE=2 SV=1 Length = 588
Score = 77.0 bits (188), Expect = 6e-13 Identities = 51/131 (38%), Positives = 69/131 (52%), Gaps = 11/131 (8%) Frame = -2
Query: 533 CERASIDEAYLDVTKKVEIFMTKACMWSQEL-------ERLLGNPEGKAGMVIESGSFDV 375 CERASIDE YLD+T E + A S EL +LG ES + Sbjct: 30 CERASIDEVYLDLTDAAESMLADAPPESLELIDEEVLKSHILGMNREDGDDFKESVRNWI 89
Query: 374 C----DLVNRRLLAGAIVAEQIRNDVRSKLGYTCSVGIATNKLLAKIASARNKPDQQTLV 207 C D ++ L G I+ ++R V + +TCS GIA NK+LAK+AS NKP QQT+V Sbjct: 90 CREDADRRDKLLSCGIIIVAELRKQVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTVV 149
Query: 206 LPGAVSDLMNA 174 AV +L+++ Sbjct: 150 PYAAVQELLSS 160
>tr|Q8H2D5|Q8H2D5_ARATH Putative DNA polymerase eta OS=Arabidopsis thaliana GN=At5g44740 PE=1 SV=1 Length = 672
Score = 77.0 bits (188), Expect = 6e-13 Identities = 51/131 (38%), Positives = 69/131 (52%), Gaps = 11/131 (8%) Frame = -2
Query: 533 CERASIDEAYLDVTKKVEIFMTKACMWSQEL-------ERLLGNPEGKAGMVIESGSFDV 375 CERASIDE YLD+T E + A S EL +LG ES + Sbjct: 114 CERASIDEVYLDLTDAAESMLADAPPESLELIDEEVLKSHILGMNREDGDDFKESVRNWI 173
Query: 374 C----DLVNRRLLAGAIVAEQIRNDVRSKLGYTCSVGIATNKLLAKIASARNKPDQQTLV 207 C D ++ L G I+ ++R V + +TCS GIA NK+LAK+AS NKP QQT+V Sbjct: 174 CREDADRRDKLLSCGIIIVAELRKQVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTVV 233
Query: 206 LPGAVSDLMNA 174 AV +L+++ Sbjct: 234 PYAAVQELLSS 244
>tr|O48586|O48586_ARATH Similar to DNA-damage-inducible protein P OS=Arabidopsis thaliana GN=T19K24.15 PE=4 SV=1 Length = 689
Score = 77.0 bits (188), Expect = 6e-13 Identities = 51/131 (38%), Positives = 69/131 (52%), Gaps = 11/131 (8%) Frame = -2
Query: 533 CERASIDEAYLDVTKKVEIFMTKACMWSQEL-------ERLLGNPEGKAGMVIESGSFDV 375 CERASIDE YLD+T E + A S EL +LG ES + Sbjct: 126 CERASIDEVYLDLTDAAESMLADAPPESLELIDEEVLKSHILGMNREDGDDFKESVRNWI 185
Query: 374 C----DLVNRRLLAGAIVAEQIRNDVRSKLGYTCSVGIATNKLLAKIASARNKPDQQTLV 207 C D ++ L G I+ ++R V + +TCS GIA NK+LAK+AS NKP QQT+V Sbjct: 186 CREDADRRDKLLSCGIIIVAELRKQVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTVV 245
Query: 206 LPGAVSDLMNA 174 AV +L+++ Sbjct: 246 PYAAVQELLSS 256
>tr|A4ZYA8|A4ZYA8_ARATH Translesion synthesis DNA polymerase eta splice variant OS=Arabidopsis thaliana GN=POLH PE=2 SV=1 Length = 442
Score = 77.0 bits (188), Expect = 6e-13 Identities = 51/131 (38%), Positives = 69/131 (52%), Gaps = 11/131 (8%) Frame = -2
Query: 533 CERASIDEAYLDVTKKVEIFMTKACMWSQEL-------ERLLGNPEGKAGMVIESGSFDV 375 CERASIDE YLD+T E + A S EL +LG ES + Sbjct: 114 CERASIDEVYLDLTDAAESMLADAPPESLELIDEEVLKSHILGMNREDGDDFKESVRNWI 173
Query: 374 C----DLVNRRLLAGAIVAEQIRNDVRSKLGYTCSVGIATNKLLAKIASARNKPDQQTLV 207 C D ++ L G I+ ++R V + +TCS GIA NK+LAK+AS NKP QQT+V Sbjct: 174 CREDADRRDKLLSCGIIIVAELRKQVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTVV 233
Query: 206 LPGAVSDLMNA 174 AV +L+++ Sbjct: 234 PYAAVQELLSS 244
>tr|A4ZYA7|A4ZYA7_ARATH Translesion synthesis DNA polymerase eta splice variant OS=Arabidopsis thaliana GN=POLH PE=2 SV=1 Length = 350
Score = 77.0 bits (188), Expect = 6e-13 Identities = 51/131 (38%), Positives = 69/131 (52%), Gaps = 11/131 (8%) Frame = -2
Query: 533 CERASIDEAYLDVTKKVEIFMTKACMWSQEL-------ERLLGNPEGKAGMVIESGSFDV 375 CERASIDE YLD+T E + A S EL +LG ES + Sbjct: 114 CERASIDEVYLDLTDAAESMLADAPPESLELIDEEVLKSHILGMNREDGDDFKESVRNWI 173
Query: 374 C----DLVNRRLLAGAIVAEQIRNDVRSKLGYTCSVGIATNKLLAKIASARNKPDQQTLV 207 C D ++ L G I+ ++R V + +TCS GIA NK+LAK+AS NKP QQT+V Sbjct: 174 CREDADRRDKLLSCGIIIVAELRKQVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTVV 233
Query: 206 LPGAVSDLMNA 174 AV +L+++ Sbjct: 234 PYAAVQELLSS 244
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