BP919340 [AcEST]

BP919340
Clone id	YMU001_000123_H11
Library	YMU01
Length	505
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000123_H11.
Accession	BP919340
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	TCGAGACCTTTTCTTACTATTAACTGCTTGAAAGGCACTGGTGGCCTCTGATATTGCCAC ATTTTCCATAAAGCCACAAAGAACGGACTTTTCATTCTCTACCATTAACCATGAGCCGTA GGCATCGTACAATTCCTTGCAGAAACTATCAACCTCGGAATCGATTTTATCAAGCTGCTA TATTTGTGCCGGCCATAGTATCAACAGGTTCTAGTCTTAGACTACACAATTGGGCCCCTT TCCAAGTCCATTCATTTCATTCAAGCTTCAGGCTTTTGGCAGGCAAATGCTTCATCATTG AATCAACCTGACAACATTAAAGACAATGTCCAAGCAATTGCGATAGTAATAGAATCCGAA GGAACCCTTGAAATGATAGGACAGAAAAAACGACAAACGAAGCAGAAAATGACTTGTGAA ATAAGGGAGACCGAAAACTTTTAACAAGCAGCTGAGATGTTCAACCCTAATTTGCGTGAA CGTAACAGCATACCTCGCAAATCAT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	P18872
Definition	sp\|P18872\|GNAO_MOUSE Guanine nucleotide-binding protein G(o) subunit alpha OS=Mus musculus
Align length	83
Score (bit)	30.8
E-value	3.8
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP919340\|Adiantum capillus-veneris mRNA, clone: YMU001_000123_H11. (505 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|P18872\|GNAO_MOUSE Guanine nucleotide-binding protein G(o) sub... 31 3.8 sp\|Q1MTN7\|RPM1_SCHPO Exoribonuclease II, mitochondrial OS=Schizo... 30 6.5 >sp\|P18872\|GNAO_MOUSE Guanine nucleotide-binding protein G(o) subunit alpha OS=Mus musculus GN=Gnao1 PE=1 SV=3 Length = 354 Score = 30.8 bits (68), Expect = 3.8 Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Frame = +1 Query: 244 KSIHFIQASGFWQANASSLNQPDNIKDNVQAIAIVIESEGTLEM-IGQKKRQTKQKMTCE 420 K + I GF + +P + +Q++A ++ + TL + G K+R+T KM C+ Sbjct: 51 KQMKIIHEDGFSGEDVKQY-KPVVYSNTIQSLAAIVRAMDTLGVEYGDKERKTDSKMVCD 109 Query: 421 I----RETENFQAAEMFNPNLR 477 + +TE F +AE+ + +R Sbjct: 110 VVSRMEDTEPF--SAELLSAMMR 130 >sp\|Q1MTN7\|RPM1_SCHPO Exoribonuclease II, mitochondrial OS=Schizosaccharomyces pombe GN=rpm1 PE=2 SV=2 Length = 957 Score = 30.0 bits (66), Expect = 6.5 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 6/64 (9%) Frame = +2 Query: 38 LVASDIATFSIKPQRTDFSFSTINHE------PASYNSLQKLSTSESILSSCYICAGHS 199 ++A T + P ++ +NH P S N + S +ES++S C I AG Sbjct: 685 VIAQPTPTVELLPNNVPYNLGDLNHPVYWSSFPTISLNVSEGYSLAESVISECMILAGRV 744 Query: 200 INRF 211 + F Sbjct: 745 SSLF 748
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A7CP48
Definition	tr\|A7CP48\|A7CP48_9BACT Radical SAM domain protein OS=Opitutaceae bacterium TAV2
Align length	52
Score (bit)	32.7
E-value	9.9
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP919340\|Adiantum capillus-veneris mRNA, clone: YMU001_000123_H11. (505 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A7CP48\|A7CP48_9BACT Radical SAM domain protein OS=Opitutaceae... 33 9.9 >tr\|A7CP48\|A7CP48_9BACT Radical SAM domain protein OS=Opitutaceae bacterium TAV2 GN=ObacDRAFT_0813 PE=3 SV=1 Length = 586 Score = 32.7 bits (73), Expect = 9.9 Identities = 20/52 (38%), Positives = 30/52 (57%) Frame = +3 Query: 123 HRTIPCRNYQPRNRFYQAAIFVPAIVSTGSSLRLHNWAPFQVHSFHSSFRLL 278 +R + R Y+PRN + + +F+ +TG LRL +WA V +F SF LL Sbjct: 493 YRELMRRLYEPRNYYRRIRVFLKTYQATGGRLRL-SWA--DVSAFLKSFWLL 541