BP919343
Clone id YMU001_000124_A03
Library
Length 391
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000124_A03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GGGTATCTGCATCTGTTGTCTCATACACAAAGGAGGCCCTTACCTACCAAAGTCTTGGAC
AGAGAACAGCAGCTTTCAGTGAAACACCCTATCAGGTGGCACCAGCAGAAATGTCATTAA
TGAATACCATGCATAGGCAATATCTCATGTTCCAGTCACGAAAGAAGCTCTACACATGCA
CCTTCACTAATCAGACTTCACCGAAATGGCTACATCTTGAGCATCTGATGCCAACATTCT
GGACGCAGGGCTGCAGCTGCAAGGAGTGATCGAAGTGGCAGCACTTTCAGGCATGCCTAA
TACAGCTTCTATGGGTGCAAATTGCTTATCAGCAGCAGAAGCTTCTTCTACCGAGGCGAA
TGTATTGATATTACGGACATATGAAGCTAGC
■■Homology search results ■■ -
sp_hit_id Q9SI93
Definition sp|Q9SI93|MGDG3_ARATH Monogalactosyldiacylglycerol synthase 3, chloroplastic OS=Arabidopsis thaliana
Align length 36
Score (bit) 30.0
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919343|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_A03.
(391 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9SI93|MGDG3_ARATH Monogalactosyldiacylglycerol synthase 3, c... 30 3.8
sp|A6L4C6|F16PC_BACV8 Fructose-1,6-bisphosphatase class 3 OS=Bac... 30 4.9
sp|Q58954|NTPTH_METJA Nucleoside-triphosphatase THEP1 OS=Methano... 29 6.4
sp|A8SE82|RPOC1_CERDE DNA-directed RNA polymerase subunit beta' ... 29 8.4

>sp|Q9SI93|MGDG3_ARATH Monogalactosyldiacylglycerol synthase 3,
chloroplastic OS=Arabidopsis thaliana GN=MGD3 PE=1 SV=2
Length = 465

Score = 30.0 bits (66), Expect = 3.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3

Query: 120 MNTMHRQYLMFQSRKKLYTCTFTNQTSPKWLHLEHL 227
+N M RQY L++ F + TSPKW+H +L
Sbjct: 121 LNDMERQYKFMVKHVGLWSVAF-HGTSPKWIHKSYL 155


>sp|A6L4C6|F16PC_BACV8 Fructose-1,6-bisphosphatase class 3
OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 /
NCTC 11154) GN=fbp PE=3 SV=1
Length = 666

Score = 29.6 bits (65), Expect = 4.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3

Query: 87 PYQVAPAEMSLMNTMHRQYLMFQSRKKLYTCTF 185
PY++ E +MN +HR ++ + KK C F
Sbjct: 379 PYKLTDEEREIMNKLHRSFVSSEKLKKHIRCLF 411


>sp|Q58954|NTPTH_METJA Nucleoside-triphosphatase THEP1
OS=Methanocaldococcus jannaschii GN=MJ1559 PE=3 SV=2
Length = 170

Score = 29.3 bits (64), Expect = 6.4
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3

Query: 63 RTAAFSETPYQVAPAEMSLMNTMHRQYL-MFQSRKKLYTCTFTNQ 194
++ FSE +V ++ L+ T+HR ++ F+ + +LYT T N+
Sbjct: 110 KSRKFSEVVDEVIKSDKPLLATLHRNWVNKFKDKGELYTLTIENR 154


>sp|A8SE82|RPOC1_CERDE DNA-directed RNA polymerase subunit beta'
OS=Ceratophyllum demersum GN=rpoC1 PE=3 SV=1
Length = 680

Score = 28.9 bits (63), Expect = 8.4
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3

Query: 54 LGQRTAAFSETPYQVAPAEMSLMNTMHRQYLMFQSRKKLYTCTFTNQT 197
L QR A E P +V + + ++ QYL+ +S KK C + T
Sbjct: 608 LDQRAIASREVPIEVQYESLGTYHEIYGQYLIVRSVKKEILCIYIRTT 655


tr_hit_id Q20XM7
Definition tr|Q20XM7|Q20XM7_RHOPB Acyl transferase region OS=Rhodopseudomonas palustris (strain BisB18)
Align length 29
Score (bit) 33.5
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919343|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_A03.
(391 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q20XM7|Q20XM7_RHOPB Acyl transferase region OS=Rhodopseudomon... 33 5.4
tr|Q6H657|Q6H657_ORYSJ Putative uncharacterized protein OJ1282_H... 33 7.1
tr|A3A9J0|A3A9J0_ORYSJ Putative uncharacterized protein OS=Oryza... 33 7.1

>tr|Q20XM7|Q20XM7_RHOPB Acyl transferase region OS=Rhodopseudomonas
palustris (strain BisB18) GN=RPC_4587 PE=4 SV=1
Length = 311

Score = 33.5 bits (75), Expect = 5.4
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
Frame = +1

Query: 25 TQRRPLPTKVLDREQQ---LSVKHPIRWH 102
T RR PT+VLDR ++ ++ HP+RWH
Sbjct: 224 TNRRARPTRVLDRIREDVATNIAHPVRWH 252


>tr|Q6H657|Q6H657_ORYSJ Putative uncharacterized protein
OJ1282_H11.22 OS=Oryza sativa subsp. japonica
GN=OJ1282_H11.22 PE=4 SV=1
Length = 544

Score = 33.1 bits (74), Expect = 7.1
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 8/54 (14%)
Frame = -2

Query: 360 FASVEEASAADKQFAPIEAVLG--------MPESAATSITPCSCSPASRMLASD 223
F EEA+ + ++FAP+E LG +P AA ++ CS +PA ML +D
Sbjct: 184 FTRAEEAAMSTRRFAPVETQLGRLVVSVQYLPSLAAFNLEICSLAPA--MLITD 235


>tr|A3A9J0|A3A9J0_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_007462 PE=4 SV=1
Length = 481

Score = 33.1 bits (74), Expect = 7.1
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 8/54 (14%)
Frame = -2

Query: 360 FASVEEASAADKQFAPIEAVLG--------MPESAATSITPCSCSPASRMLASD 223
F EEA+ + ++FAP+E LG +P AA ++ CS +PA ML +D
Sbjct: 121 FTRAEEAAMSTRRFAPVETQLGRLVVSVQYLPSLAAFNLEICSLAPA--MLITD 172